RNA–Protein interactions for RNA: ENST00000602509.5

PPFIA3-205, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 4

Gene PPFIA3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-205ENST00000602509 DSC3Q14574 896 aa29.46■■■□□ 2.31
PPFIA3-205ENST00000602509 PLA2G4FQ68DD2 849 aa29.46■■■□□ 2.31
PPFIA3-205ENST00000602509 ZSCAN31Q96LW9 406 aaPredicted RBP29.46■■■□□ 2.31
PPFIA3-205ENST00000602509 CEP89Q96ST8 783 aa29.46■■■□□ 2.31
PPFIA3-205ENST00000602509 GCOM2Q9BZD3 368 aaPredicted RBP29.46■■■□□ 2.31
PPFIA3-205ENST00000602509 NSUN3Q9H649 340 aaKnown RBP29.46■■■□□ 2.31
PPFIA3-205ENST00000602509 UBE2ZQ9H832 354 aaPredicted RBP29.46■■■□□ 2.31
PPFIA3-205ENST00000602509 ATP6V0A4Q9HBG4 840 aa29.46■■■□□ 2.31
PPFIA3-205ENST00000602509 SUCLA2Q9P2R7 463 aaPredicted RBP29.46■■■□□ 2.31
PPFIA3-205ENST00000602509 IGKV6-21A0A0C4DH24 114 aa29.45■■■□□ 2.31
PPFIA3-205ENST00000602509 GRM6O15303 877 aa29.45■■■□□ 2.31
PPFIA3-205ENST00000602509 CALCRLQ16602 461 aa29.45■■■□□ 2.31
PPFIA3-205ENST00000602509 SPOUT1Q5T280 376 aaKnown RBP29.45■■■□□ 2.31
PPFIA3-205ENST00000602509 CEP170P1Q96L14 293 aa29.45■■■□□ 2.31
PPFIA3-205ENST00000602509 LLPHQ9BRT6 129 aaKnown RBP29.45■■■□□ 2.31
PPFIA3-205ENST00000602509 CYP26B1Q9NR63 512 aa29.45■■■□□ 2.31
PPFIA3-205ENST00000602509 TMEM161AQ9NX61 479 aa29.45■■■□□ 2.31
PPFIA3-205ENST00000602509 EVPLQ92817 2033 aa29.45■■■□□ 2.3
PPFIA3-205ENST00000602509 TBKBP1A7MCY6 615 aa29.44■■■□□ 2.3
PPFIA3-205ENST00000602509 FAM189BP81408 668 aa29.44■■■□□ 2.3
PPFIA3-205ENST00000602509 NAALADL2Q58DX5 795 aa29.44■■■□□ 2.3
PPFIA3-205ENST00000602509 TCEAL5Q5H9L2 206 aa29.44■■■□□ 2.3
PPFIA3-205ENST00000602509 EXOC8Q8IYI6 725 aa29.44■■■□□ 2.3
PPFIA3-205ENST00000602509 SLC7A3Q8WY07 619 aa29.44■■■□□ 2.3
PPFIA3-205ENST00000602509 P2RX5Q93086 422 aa29.44■■■□□ 2.3
PPFIA3-205ENST00000602509 LXNQ9BS40 222 aa29.44■■■□□ 2.3
PPFIA3-205ENST00000602509 ELAC1Q9H777 363 aaKnown RBP29.44■■■□□ 2.3
PPFIA3-205ENST00000602509 NEMFO60524 1076 aa29.43■■■□□ 2.3
PPFIA3-205ENST00000602509 GUCY1B3Q02153 619 aa29.43■■■□□ 2.3
PPFIA3-205ENST00000602509 FAM102BQ5T8I3 360 aa29.43■■■□□ 2.3
PPFIA3-205ENST00000602509 OTUD6AQ7L8S5 288 aa29.43■■■□□ 2.3
PPFIA3-205ENST00000602509 RHPN2Q8IUC4 686 aa29.43■■■□□ 2.3
PPFIA3-205ENST00000602509 C8orf76Q96K31 380 aa29.43■■■□□ 2.3
PPFIA3-205ENST00000602509 ZSWIM4Q9H7M6 989 aa29.43■■■□□ 2.3
PPFIA3-205ENST00000602509 ALG13Q9NP73 1137 aaKnown RBP29.43■■■□□ 2.3
PPFIA3-205ENST00000602509 SH2B1Q9NRF2 756 aaPredicted RBP29.43■■■□□ 2.3
PPFIA3-205ENST00000602509 PCDHA12Q9UN75 941 aa29.43■■■□□ 2.3
PPFIA3-205ENST00000602509 PLAGL2Q9UPG8 496 aa29.43■■■□□ 2.3
PPFIA3-205ENST00000602509 PPME1Q9Y570 386 aa29.43■■■□□ 2.3
PPFIA3-205ENST00000602509 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP29.42■■■□□ 2.3
PPFIA3-205ENST00000602509 FGFR4P22455 802 aa29.42■■■□□ 2.3
PPFIA3-205ENST00000602509 NPEPPSP55786 919 aa29.42■■■□□ 2.3
PPFIA3-205ENST00000602509 C4orf19Q8IY42 314 aa29.42■■■□□ 2.3
PPFIA3-205ENST00000602509 DYDC2Q96IM9 177 aa29.42■■■□□ 2.3
PPFIA3-205ENST00000602509 AAASQ9NRG9 546 aa29.42■■■□□ 2.3
PPFIA3-205ENST00000602509 RGL1Q9NZL6 768 aa29.42■■■□□ 2.3
PPFIA3-205ENST00000602509 WRAP73Q9P2S5 460 aaPredicted RBP29.42■■■□□ 2.3
PPFIA3-205ENST00000602509 A0A087WZ62 844 aa29.41■■■□□ 2.3
PPFIA3-205ENST00000602509 HOXA2O43364 376 aa29.41■■■□□ 2.3
PPFIA3-205ENST00000602509 CSPG5O95196 566 aa29.41■■■□□ 2.3
PPFIA3-205ENST00000602509 FGFR1P11362 822 aa29.41■■■□□ 2.3
PPFIA3-205ENST00000602509 KCNA5P22460 613 aa29.41■■■□□ 2.3
PPFIA3-205ENST00000602509 YWHABP31946 246 aaKnown RBP29.41■■■□□ 2.3
PPFIA3-205ENST00000602509 POLGP54098 1239 aaPredicted RBP29.41■■■□□ 2.3
PPFIA3-205ENST00000602509 CYP4A11Q02928 519 aa29.41■■■□□ 2.3
PPFIA3-205ENST00000602509 SPIRE1Q08AE8 756 aa29.41■■■□□ 2.3
PPFIA3-205ENST00000602509 EP400NLQ6ZTU2 488 aa29.41■■■□□ 2.3
PPFIA3-205ENST00000602509 ZNF410Q86VK4 478 aa29.41■■■□□ 2.3
PPFIA3-205ENST00000602509 KIF2CQ99661 725 aa29.41■■■□□ 2.3
PPFIA3-205ENST00000602509 FDXACB1Q9BRP7 624 aaPredicted RBP29.41■■■□□ 2.3
PPFIA3-205ENST00000602509 INO80BQ9C086 356 aaPredicted RBP29.41■■■□□ 2.3
PPFIA3-205ENST00000602509 PCDHB12Q9Y5F1 795 aa29.41■■■□□ 2.3
PPFIA3-205ENST00000602509 LOXHD1Q8IVV2 1947 aa29.41■■■□□ 2.3
PPFIA3-205ENST00000602509 RALGAPA2Q2PPJ7 1873 aa29.4■■■□□ 2.3
PPFIA3-205ENST00000602509 CSDE1O75534 798 aaKnown RBP29.4■■■□□ 2.3
PPFIA3-205ENST00000602509 SFPQP23246 707 aaKnown RBP eCLIP29.4■■■□□ 2.3
PPFIA3-205ENST00000602509 RFC5P40937 340 aa29.4■■■□□ 2.3
PPFIA3-205ENST00000602509 HMGN5P82970 282 aaKnown RBP29.4■■■□□ 2.3
PPFIA3-205ENST00000602509 CTTNQ14247 550 aaKnown RBP29.4■■■□□ 2.3
PPFIA3-205ENST00000602509 TPH2Q8IWU9 490 aa29.4■■■□□ 2.3
PPFIA3-205ENST00000602509 ABI1Q8IZP0 508 aa29.4■■■□□ 2.3
PPFIA3-205ENST00000602509 FAM184AQ8NB25 1140 aa29.4■■■□□ 2.3
PPFIA3-205ENST00000602509 KLHL23Q8NBE8 558 aa29.4■■■□□ 2.3
PPFIA3-205ENST00000602509 NLRP4Q96MN2 994 aa29.4■■■□□ 2.3
PPFIA3-205ENST00000602509 NECAB3Q96P71 396 aaPredicted RBP29.4■■■□□ 2.3
PPFIA3-205ENST00000602509 TTC12Q9H892 705 aaPredicted RBP29.4■■■□□ 2.3
PPFIA3-205ENST00000602509 DACT1Q9NYF0 836 aa29.4■■■□□ 2.3
PPFIA3-205ENST00000602509 NCK2O43639 380 aa29.39■■■□□ 2.3
PPFIA3-205ENST00000602509 ATP2B1P20020 1258 aa29.39■■■□□ 2.3
PPFIA3-205ENST00000602509 TXKP42681 527 aa29.39■■■□□ 2.3
PPFIA3-205ENST00000602509 ECHDC2Q86YB7 292 aa29.39■■■□□ 2.3
PPFIA3-205ENST00000602509 ZNF579Q8NAF0 562 aaKnown RBP29.39■■■□□ 2.3
PPFIA3-205ENST00000602509 RNF169Q8NCN4 708 aa29.39■■■□□ 2.3
PPFIA3-205ENST00000602509 MUC3AQ02505 3323 aa29.39■■■□□ 2.3
PPFIA3-205ENST00000602509 ITGB1P05556 798 aa29.38■■■□□ 2.29
PPFIA3-205ENST00000602509 LEXMQ3ZCV2 418 aa29.38■■■□□ 2.29
PPFIA3-205ENST00000602509 XKR9Q5GH70 373 aa29.38■■■□□ 2.29
PPFIA3-205ENST00000602509 PABPC5Q96DU9 382 aaKnown RBP29.38■■■□□ 2.29
PPFIA3-205ENST00000602509 EIF2AK1Q9BQI3 630 aaKnown RBP29.38■■■□□ 2.29
PPFIA3-205ENST00000602509 TMEM117Q9H0C3 514 aa29.38■■■□□ 2.29
PPFIA3-205ENST00000602509 CHST12Q9NRB3 414 aa29.38■■■□□ 2.29
PPFIA3-205ENST00000602509 TYW1Q9NV66 732 aaKnown RBP29.38■■■□□ 2.29
PPFIA3-205ENST00000602509 RBM25P49756 843 aaKnown RBP29.37■■■□□ 2.29
PPFIA3-205ENST00000602509 GNL2Q13823 731 aaKnown RBP29.37■■■□□ 2.29
PPFIA3-205ENST00000602509 KSR1Q8IVT5 923 aa29.37■■■□□ 2.29
PPFIA3-205ENST00000602509 SPPL3Q8TCT6 385 aa29.37■■■□□ 2.29
PPFIA3-205ENST00000602509 NEK9Q8TD19 979 aa29.37■■■□□ 2.29
PPFIA3-205ENST00000602509 PSPC1Q8WXF1 523 aaKnown RBP29.37■■■□□ 2.29
PPFIA3-205ENST00000602509 PPP2R3CQ969Q6 453 aa29.37■■■□□ 2.29
PPFIA3-205ENST00000602509 DHX33Q9H6R0 707 aaKnown RBP29.37■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms