RNA–Protein interactions for RNA: ENST00000601809.5

IRF3-230, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-230ENST00000601809 ANKEF1Q9NU02 776 aa19.57■□□□□ 0.72
IRF3-230ENST00000601809 SMC3Q9UQE7 1217 aa19.57■□□□□ 0.72
IRF3-230ENST00000601809 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.57■□□□□ 0.72
IRF3-230ENST00000601809 A0A0C4DFX4 3053 aa19.56■□□□□ 0.72
IRF3-230ENST00000601809 MED24O75448 989 aa19.56■□□□□ 0.72
IRF3-230ENST00000601809 RFC5P40937 340 aa19.56■□□□□ 0.72
IRF3-230ENST00000601809 FAM189BP81408 668 aa19.56■□□□□ 0.72
IRF3-230ENST00000601809 NFX1Q12986 1120 aaKnown RBP19.56■□□□□ 0.72
IRF3-230ENST00000601809 CATSPER3Q86XQ3 398 aa19.56■□□□□ 0.72
IRF3-230ENST00000601809 NPAS4Q8IUM7 802 aa19.56■□□□□ 0.72
IRF3-230ENST00000601809 ARNTL2Q8WYA1 636 aa19.56■□□□□ 0.72
IRF3-230ENST00000601809 YME1L1Q96TA2 773 aa19.56■□□□□ 0.72
IRF3-230ENST00000601809 JPH2Q9BR39 696 aaPredicted RBP19.56■□□□□ 0.72
IRF3-230ENST00000601809 C17orf80Q9BSJ5 609 aa19.56■□□□□ 0.72
IRF3-230ENST00000601809 POLR3CQ9BUI4 534 aaPredicted RBP19.56■□□□□ 0.72
IRF3-230ENST00000601809 SUCLA2Q9P2R7 463 aaPredicted RBP19.56■□□□□ 0.72
IRF3-230ENST00000601809 NOL7Q9UMY1 257 aaKnown RBP19.56■□□□□ 0.72
IRF3-230ENST00000601809 XIRP2A4UGR9 3374 aa19.55■□□□□ 0.72
IRF3-230ENST00000601809 ATG2AQ2TAZ0 1938 aa19.55■□□□□ 0.72
IRF3-230ENST00000601809 TECP42680 631 aa19.55■□□□□ 0.72
IRF3-230ENST00000601809 SARSP49591 514 aaKnown RBP19.55■□□□□ 0.72
IRF3-230ENST00000601809 RARRES1P49788 294 aa19.55■□□□□ 0.72
IRF3-230ENST00000601809 CDC42EP1Q00587 391 aa19.55■□□□□ 0.72
IRF3-230ENST00000601809 PTGDRQ13258 359 aa19.55■□□□□ 0.72
IRF3-230ENST00000601809 GRB10Q13322 594 aa19.55■□□□□ 0.72
IRF3-230ENST00000601809 GNL2Q13823 731 aaKnown RBP19.55■□□□□ 0.72
IRF3-230ENST00000601809 IL17AQ16552 155 aa19.55■□□□□ 0.72
IRF3-230ENST00000601809 ODR4Q5SWX8 454 aa19.55■□□□□ 0.72
IRF3-230ENST00000601809 OTUD6AQ7L8S5 288 aa19.55■□□□□ 0.72
IRF3-230ENST00000601809 ZNF410Q86VK4 478 aa19.55■□□□□ 0.72
IRF3-230ENST00000601809 KSR1Q8IVT5 923 aa19.55■□□□□ 0.72
IRF3-230ENST00000601809 IGSF22Q8N9C0 903 aa19.55■□□□□ 0.72
IRF3-230ENST00000601809 ADAM2Q99965 735 aa19.55■□□□□ 0.72
IRF3-230ENST00000601809 IFT122Q9HBG6 1241 aa19.55■□□□□ 0.72
IRF3-230ENST00000601809 TUFT1Q9NNX1 390 aa19.55■□□□□ 0.72
IRF3-230ENST00000601809 MTCH2Q9Y6C9 303 aa19.55■□□□□ 0.72
IRF3-230ENST00000601809 PRRC2BQ5JSZ5 2229 aaKnown RBP19.55■□□□□ 0.72
IRF3-230ENST00000601809 ADGRA3Q8IWK6 1321 aa19.54■□□□□ 0.72
IRF3-230ENST00000601809 A0A087WZ62 844 aa19.54■□□□□ 0.72
IRF3-230ENST00000601809 XRCC6P12956 609 aaKnown RBP eCLIP19.54■□□□□ 0.72
IRF3-230ENST00000601809 RPA1P27694 616 aa19.54■□□□□ 0.72
IRF3-230ENST00000601809 EMC2Q15006 297 aa19.54■□□□□ 0.72
IRF3-230ENST00000601809 ECM1Q16610 540 aa19.54■□□□□ 0.72
IRF3-230ENST00000601809 XKR9Q5GH70 373 aa19.54■□□□□ 0.72
IRF3-230ENST00000601809 SLC7A3Q8WY07 619 aa19.54■□□□□ 0.72
IRF3-230ENST00000601809 CLP1Q92989 425 aaKnown RBP19.54■□□□□ 0.72
IRF3-230ENST00000601809 FDXACB1Q9BRP7 624 aaPredicted RBP19.54■□□□□ 0.72
IRF3-230ENST00000601809 GAS2O43903 313 aaKnown RBP19.53■□□□□ 0.72
IRF3-230ENST00000601809 CSDE1O75534 798 aaKnown RBP19.53■□□□□ 0.72
IRF3-230ENST00000601809 FGFR4P22455 802 aa19.53■□□□□ 0.72
IRF3-230ENST00000601809 PRPHP41219 470 aa19.53■□□□□ 0.72
IRF3-230ENST00000601809 DNM2P50570 870 aa19.53■□□□□ 0.72
IRF3-230ENST00000601809 POLGP54098 1239 aaPredicted RBP19.53■□□□□ 0.72
IRF3-230ENST00000601809 RILPL1Q5EBL4 403 aa19.53■□□□□ 0.72
IRF3-230ENST00000601809 LARP1BQ659C4 914 aaKnown RBP19.53■□□□□ 0.72
IRF3-230ENST00000601809 SLC24A5Q71RS6 500 aa19.53■□□□□ 0.72
IRF3-230ENST00000601809 RHPN2Q8IUC4 686 aa19.53■□□□□ 0.72
IRF3-230ENST00000601809 EXOC8Q8IYI6 725 aa19.53■□□□□ 0.72
IRF3-230ENST00000601809 PIGOQ8TEQ8 1089 aa19.53■□□□□ 0.72
IRF3-230ENST00000601809 GDPD5Q8WTR4 605 aa19.53■□□□□ 0.72
IRF3-230ENST00000601809 PRPF31Q8WWY3 499 aaKnown RBP19.53■□□□□ 0.72
IRF3-230ENST00000601809 TMEM143Q96AN5 459 aa19.53■□□□□ 0.72
IRF3-230ENST00000601809 C1orf112Q9NSG2 853 aa19.53■□□□□ 0.72
IRF3-230ENST00000601809 RNF19AQ9NV58 838 aa19.53■□□□□ 0.72
IRF3-230ENST00000601809 COL4A3BPQ9Y5P4 624 aa19.53■□□□□ 0.72
IRF3-230ENST00000601809 A0A087WWV3 80 aa19.52■□□□□ 0.72
IRF3-230ENST00000601809 LAD1O00515 517 aa19.52■□□□□ 0.72
IRF3-230ENST00000601809 MUTP22033 750 aa19.52■□□□□ 0.72
IRF3-230ENST00000601809 ATP2C1P98194 919 aaPredicted RBP19.52■□□□□ 0.72
IRF3-230ENST00000601809 PDIA5Q14554 519 aa19.52■□□□□ 0.72
IRF3-230ENST00000601809 EPC2Q52LR7 807 aa19.52■□□□□ 0.72
IRF3-230ENST00000601809 MCTP1Q6DN14 999 aa19.52■□□□□ 0.72
IRF3-230ENST00000601809 NLRP7Q8WX94 980 aa19.52■□□□□ 0.72
IRF3-230ENST00000601809 SNX21Q969T3 373 aa19.52■□□□□ 0.72
IRF3-230ENST00000601809 INTS4Q96HW7 963 aaKnown RBP19.52■□□□□ 0.72
IRF3-230ENST00000601809 SAMD11Q96NU1 681 aa19.52■□□□□ 0.72
IRF3-230ENST00000601809 GCOM2Q9BZD3 368 aaPredicted RBP19.52■□□□□ 0.72
IRF3-230ENST00000601809 DBR1Q9UK59 544 aaKnown RBP19.52■□□□□ 0.72
IRF3-230ENST00000601809 VCANP13611 3396 aa19.52■□□□□ 0.72
IRF3-230ENST00000601809 C5orf67F2Z3F1 127 aa19.51■□□□□ 0.71
IRF3-230ENST00000601809 GATMP50440 423 aa19.51■□□□□ 0.71
IRF3-230ENST00000601809 LAMTOR4Q0VGL1 99 aa19.51■□□□□ 0.71
IRF3-230ENST00000601809 POTEGQ6S5H5 508 aa19.51■□□□□ 0.71
IRF3-230ENST00000601809 FERMT3Q86UX7 667 aa19.51■□□□□ 0.71
IRF3-230ENST00000601809 TMEM192Q8IY95 271 aa19.51■□□□□ 0.71
IRF3-230ENST00000601809 CMTR2Q8IYT2 770 aaKnown RBP19.51■□□□□ 0.71
IRF3-230ENST00000601809 PSPC1Q8WXF1 523 aaKnown RBP19.51■□□□□ 0.71
IRF3-230ENST00000601809 TRAIPQ9BWF2 469 aa19.51■□□□□ 0.71
IRF3-230ENST00000601809 ELAC1Q9H777 363 aaKnown RBP19.51■□□□□ 0.71
IRF3-230ENST00000601809 MINDY3Q9H8M7 445 aa19.51■□□□□ 0.71
IRF3-230ENST00000601809 BMP2KQ9NSY1 1161 aaPredicted RBP19.51■□□□□ 0.71
IRF3-230ENST00000601809 MTUS1Q9ULD2 1270 aa19.51■□□□□ 0.71
IRF3-230ENST00000601809 DENND3A2RUS2 1198 aa19.5■□□□□ 0.71
IRF3-230ENST00000601809 H3BQV1 296 aa19.5■□□□□ 0.71
IRF3-230ENST00000601809 K7ELQ4 463 aaPredicted RBP19.5■□□□□ 0.71
IRF3-230ENST00000601809 DGAT1O75907 488 aa19.5■□□□□ 0.71
IRF3-230ENST00000601809 STAG3L1P0CL83 205 aa19.5■□□□□ 0.71
IRF3-230ENST00000601809 ATF7P17544 494 aaPredicted RBP19.5■□□□□ 0.71
IRF3-230ENST00000601809 IGFBP4P22692 258 aa19.5■□□□□ 0.71
IRF3-230ENST00000601809 ARL2P36404 184 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms