RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 HOXD10P28358 340 aa12.87□□□□□ -0.35
VRK3-223ENST00000601341 CYP2C19P33261 490 aa12.87□□□□□ -0.35
VRK3-223ENST00000601341 PRCPP42785 496 aa12.87□□□□□ -0.35
VRK3-223ENST00000601341 FLT3LGP49771 235 aa12.87□□□□□ -0.35
VRK3-223ENST00000601341 STX17P56962 302 aa12.87□□□□□ -0.35
VRK3-223ENST00000601341 CBX1P83916 185 aa12.87□□□□□ -0.35
VRK3-223ENST00000601341 CACNB1Q02641 598 aaPredicted RBP12.87□□□□□ -0.35
VRK3-223ENST00000601341 TNFAIP2Q03169 654 aa12.87□□□□□ -0.35
VRK3-223ENST00000601341 DMTNQ08495 405 aa12.87□□□□□ -0.35
VRK3-223ENST00000601341 ERCC6LQ2NKX8 1250 aa12.87□□□□□ -0.35
VRK3-223ENST00000601341 HSP90AA4PQ58FG1 418 aa12.87□□□□□ -0.35
VRK3-223ENST00000601341 CYP26C1Q6V0L0 522 aa12.87□□□□□ -0.35
VRK3-223ENST00000601341 ZNF662Q6ZS27 426 aa12.87□□□□□ -0.35
VRK3-223ENST00000601341 TRMT1LQ7Z2T5 733 aaKnown RBP12.87□□□□□ -0.35
VRK3-223ENST00000601341 PPTC7Q8NI37 304 aa12.87□□□□□ -0.35
VRK3-223ENST00000601341 PCYT2Q99447 389 aa12.87□□□□□ -0.35
VRK3-223ENST00000601341 TIPINQ9BVW5 301 aa12.87□□□□□ -0.35
VRK3-223ENST00000601341 ZHX3Q9H4I2 956 aa12.87□□□□□ -0.35
VRK3-223ENST00000601341 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.86□□□□□ -0.35
VRK3-223ENST00000601341 LGALS16A8MUM7 142 aa12.86□□□□□ -0.35
VRK3-223ENST00000601341 FANCGO15287 622 aa12.86□□□□□ -0.35
VRK3-223ENST00000601341 KIF5CO60282 957 aa12.86□□□□□ -0.35
VRK3-223ENST00000601341 LGR5O75473 907 aa12.86□□□□□ -0.35
VRK3-223ENST00000601341 FAM13AO94988 1023 aa12.86□□□□□ -0.35
VRK3-223ENST00000601341 STBD1O95210 358 aa12.86□□□□□ -0.35
VRK3-223ENST00000601341 OATP04181 439 aa12.86□□□□□ -0.35
VRK3-223ENST00000601341 ZNF865P0CJ78 1059 aaPredicted RBP12.86□□□□□ -0.35
VRK3-223ENST00000601341 PRKCSHP14314 528 aaPredicted RBP12.86□□□□□ -0.35
VRK3-223ENST00000601341 SMPD1P17405 629 aa12.86□□□□□ -0.35
VRK3-223ENST00000601341 SLC26A2P50443 739 aa12.86□□□□□ -0.35
VRK3-223ENST00000601341 NPEPPSP55786 919 aa12.86□□□□□ -0.35
VRK3-223ENST00000601341 PRKCZQ05513 592 aa12.86□□□□□ -0.35
VRK3-223ENST00000601341 FAM26FQ5R3K3 315 aa12.86□□□□□ -0.35
VRK3-223ENST00000601341 PRAMEF19Q5SWL8 479 aa12.86□□□□□ -0.35
VRK3-223ENST00000601341 MFSD14CQ5VZR4 134 aa12.86□□□□□ -0.35
VRK3-223ENST00000601341 PLPPR4Q7Z2D5 763 aa12.86□□□□□ -0.35
VRK3-223ENST00000601341 FAM114A1Q8IWE2 563 aa12.86□□□□□ -0.35
VRK3-223ENST00000601341 RABGGTAQ92696 567 aa12.86□□□□□ -0.35
VRK3-223ENST00000601341 GLG1Q92896 1179 aa12.86□□□□□ -0.35
VRK3-223ENST00000601341 CEP170P1Q96L14 293 aa12.86□□□□□ -0.35
VRK3-223ENST00000601341 SLC39A2Q9NP94 309 aa12.86□□□□□ -0.35
VRK3-223ENST00000601341 NRBP2Q9NSY0 501 aa12.86□□□□□ -0.35
VRK3-223ENST00000601341 ABHD10Q9NUJ1 306 aa12.86□□□□□ -0.35
VRK3-223ENST00000601341 SAGE1Q9NXZ1 904 aa12.86□□□□□ -0.35
VRK3-223ENST00000601341 SEPT9Q9UHD8 586 aaPredicted RBP12.86□□□□□ -0.35
VRK3-223ENST00000601341 MCM3APO60318 1980 aa12.86□□□□□ -0.35
VRK3-223ENST00000601341 EMSYQ7Z589 1322 aa12.86□□□□□ -0.35
VRK3-223ENST00000601341 TMEM150BA6NC51 233 aa12.86□□□□□ -0.35
VRK3-223ENST00000601341 GPR25O00155 361 aa12.86□□□□□ -0.35
VRK3-223ENST00000601341 ARHGAP29Q52LW3 1261 aa12.86□□□□□ -0.35
VRK3-223ENST00000601341 GJC2Q5T442 439 aaPredicted RBP12.86□□□□□ -0.35
VRK3-223ENST00000601341 PLA2G4FQ68DD2 849 aa12.86□□□□□ -0.35
VRK3-223ENST00000601341 KIAA0895Q8NCT3 520 aa12.86□□□□□ -0.35
VRK3-223ENST00000601341 HPS3Q969F9 1004 aa12.86□□□□□ -0.35
VRK3-223ENST00000601341 FAM167AQ96KS9 214 aa12.86□□□□□ -0.35
VRK3-223ENST00000601341 WDR24Q96S15 920 aa12.86□□□□□ -0.35
VRK3-223ENST00000601341 NUP58Q9BVL2 599 aa12.86□□□□□ -0.35
VRK3-223ENST00000601341 SMARCAD1Q9H4L7 1026 aa12.86□□□□□ -0.35
VRK3-223ENST00000601341 PARVGQ9HBI0 331 aa12.86□□□□□ -0.35
VRK3-223ENST00000601341 CYP26B1Q9NR63 512 aa12.86□□□□□ -0.35
VRK3-223ENST00000601341 SEL1LQ9UBV2 794 aa12.86□□□□□ -0.35
VRK3-223ENST00000601341 GABRQQ9UN88 632 aa12.86□□□□□ -0.35
VRK3-223ENST00000601341 MAPK8IP1Q9UQF2 711 aa12.86□□□□□ -0.35
VRK3-223ENST00000601341 DOCK3Q8IZD9 2030 aa12.85□□□□□ -0.35
VRK3-223ENST00000601341 USO1O60763 962 aaKnown RBP12.85□□□□□ -0.35
VRK3-223ENST00000601341 PPFIA4O75335 1185 aa12.85□□□□□ -0.35
VRK3-223ENST00000601341 KIF20AO95235 890 aa12.85□□□□□ -0.35
VRK3-223ENST00000601341 GNRH1P01148 92 aa12.85□□□□□ -0.35
VRK3-223ENST00000601341 TUBBP07437 444 aa12.85□□□□□ -0.35
VRK3-223ENST00000601341 ATP4AP20648 1035 aa12.85□□□□□ -0.35
VRK3-223ENST00000601341 CASP14P31944 242 aa12.85□□□□□ -0.35
VRK3-223ENST00000601341 DNM2P50570 870 aa12.85□□□□□ -0.35
VRK3-223ENST00000601341 GOLGA8FQ08AF8 430 aa12.85□□□□□ -0.35
VRK3-223ENST00000601341 GOLGA8DPQ0D2H9 430 aa12.85□□□□□ -0.35
VRK3-223ENST00000601341 ARHGEF6Q15052 776 aa12.85□□□□□ -0.35
VRK3-223ENST00000601341 RSRC2Q7L4I2 434 aaKnown RBP12.85□□□□□ -0.35
VRK3-223ENST00000601341 GUF1Q8N442 669 aaKnown RBP12.85□□□□□ -0.35
VRK3-223ENST00000601341 AFG1LQ8WV93 481 aa12.85□□□□□ -0.35
VRK3-223ENST00000601341 NIFKQ9BYG3 293 aaKnown RBP12.85□□□□□ -0.35
VRK3-223ENST00000601341 OLFML3Q9NRN5 406 aa12.85□□□□□ -0.35
VRK3-223ENST00000601341 FAM184BQ9ULE4 1060 aa12.85□□□□□ -0.35
VRK3-223ENST00000601341 PCDHA2Q9Y5H9 948 aa12.85□□□□□ -0.35
VRK3-223ENST00000601341 SOWAHDA6NJG2 315 aa12.84□□□□□ -0.35
VRK3-223ENST00000601341 RSPH10B2B2RC85 870 aa12.84□□□□□ -0.35
VRK3-223ENST00000601341 HIP1RO75146 1068 aa12.84□□□□□ -0.35
VRK3-223ENST00000601341 DGAT1O75907 488 aa12.84□□□□□ -0.35
VRK3-223ENST00000601341 RSPH10BP0C881 870 aa12.84□□□□□ -0.35
VRK3-223ENST00000601341 FXR1P51114 621 aaKnown RBP eCLIP12.84□□□□□ -0.35
VRK3-223ENST00000601341 ZNF131P52739 623 aa12.84□□□□□ -0.35
VRK3-223ENST00000601341 FIGNQ5HY92 759 aa12.84□□□□□ -0.35
VRK3-223ENST00000601341 TTI2Q6NXR4 508 aa12.84□□□□□ -0.35
VRK3-223ENST00000601341 RAD9BQ6WBX8 426 aa12.84□□□□□ -0.35
VRK3-223ENST00000601341 SFR1Q86XK3 245 aa12.84□□□□□ -0.35
VRK3-223ENST00000601341 IRF2BP1Q8IU81 584 aa12.84□□□□□ -0.35
VRK3-223ENST00000601341 MYOCDQ8IZQ8 938 aa12.84□□□□□ -0.35
VRK3-223ENST00000601341 MYCT1Q8N699 235 aa12.84□□□□□ -0.35
VRK3-223ENST00000601341 CEP112Q8N8E3 955 aa12.84□□□□□ -0.35
VRK3-223ENST00000601341 MCPH1Q8NEM0 835 aa12.84□□□□□ -0.35
VRK3-223ENST00000601341 OR6J1Q8NGC5 347 aa12.84□□□□□ -0.35
VRK3-223ENST00000601341 ZNF507Q8TCN5 953 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms