RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 POTEGQ6S5H5 508 aa12.98□□□□□ -0.33
CHMP2A-207ENST00000600804 ANO5Q75V66 913 aa12.98□□□□□ -0.33
CHMP2A-207ENST00000600804 TRIM50Q86XT4 487 aa12.98□□□□□ -0.33
CHMP2A-207ENST00000600804 EXOC8Q8IYI6 725 aa12.98□□□□□ -0.33
CHMP2A-207ENST00000600804 FMR1NBQ8N0W7 255 aaPredicted RBP12.98□□□□□ -0.33
CHMP2A-207ENST00000600804 TIGD1Q96MW7 591 aa12.98□□□□□ -0.33
CHMP2A-207ENST00000600804 BLOC1S4Q9NUP1 217 aa12.98□□□□□ -0.33
CHMP2A-207ENST00000600804 DDX19AQ9NUU7 478 aaKnown RBP12.98□□□□□ -0.33
CHMP2A-207ENST00000600804 KCND2Q9NZV8 630 aa12.98□□□□□ -0.33
CHMP2A-207ENST00000600804 EVPLQ92817 2033 aa12.97□□□□□ -0.33
CHMP2A-207ENST00000600804 A0A1B0GVL5 298 aa12.97□□□□□ -0.33
CHMP2A-207ENST00000600804 RRN3P2A6NIE6 340 aa12.97□□□□□ -0.33
CHMP2A-207ENST00000600804 POLR2DO15514 142 aaKnown RBP12.97□□□□□ -0.33
CHMP2A-207ENST00000600804 SLFN14P0C7P3 912 aa12.97□□□□□ -0.33
CHMP2A-207ENST00000600804 RARRES1P49788 294 aa12.97□□□□□ -0.33
CHMP2A-207ENST00000600804 NDUFA8P51970 172 aa12.97□□□□□ -0.33
CHMP2A-207ENST00000600804 MFSD10Q14728 455 aa12.97□□□□□ -0.33
CHMP2A-207ENST00000600804 KIAA0753Q2KHM9 967 aa12.97□□□□□ -0.33
CHMP2A-207ENST00000600804 ZNF484Q5JVG2 852 aa12.97□□□□□ -0.33
CHMP2A-207ENST00000600804 PPP2R2DQ66LE6 453 aa12.97□□□□□ -0.33
CHMP2A-207ENST00000600804 CNNM4Q6P4Q7 775 aa12.97□□□□□ -0.33
CHMP2A-207ENST00000600804 MICALL1Q8N3F8 863 aa12.97□□□□□ -0.33
CHMP2A-207ENST00000600804 CEP89Q96ST8 783 aa12.97□□□□□ -0.33
CHMP2A-207ENST00000600804 GOLPH3LQ9H4A5 285 aa12.97□□□□□ -0.33
CHMP2A-207ENST00000600804 CERS4Q9HA82 394 aa12.97□□□□□ -0.33
CHMP2A-207ENST00000600804 PCDHA11Q9Y5I1 949 aa12.97□□□□□ -0.33
CHMP2A-207ENST00000600804 TRIOO75962 3097 aa12.97□□□□□ -0.33
CHMP2A-207ENST00000600804 WDFY4Q6ZS81 3184 aa12.96□□□□□ -0.33
CHMP2A-207ENST00000600804 NRCAMQ92823 1304 aa12.96□□□□□ -0.33
CHMP2A-207ENST00000600804 ZBTB42B2RXF5 422 aa12.96□□□□□ -0.33
CHMP2A-207ENST00000600804 ZNF202O95125 648 aa12.96□□□□□ -0.33
CHMP2A-207ENST00000600804 MBD3O95983 291 aa12.96□□□□□ -0.33
CHMP2A-207ENST00000600804 MYL1P05976 194 aa12.96□□□□□ -0.33
CHMP2A-207ENST00000600804 CA3P07451 260 aa12.96□□□□□ -0.33
CHMP2A-207ENST00000600804 STAT6P42226 847 aa12.96□□□□□ -0.33
CHMP2A-207ENST00000600804 ADAM17P78536 824 aa12.96□□□□□ -0.33
CHMP2A-207ENST00000600804 KCNK18Q7Z418 384 aa12.96□□□□□ -0.33
CHMP2A-207ENST00000600804 SYT2Q8N9I0 419 aaPredicted RBP12.96□□□□□ -0.33
CHMP2A-207ENST00000600804 RASSF8Q8NHQ8 419 aa12.96□□□□□ -0.33
CHMP2A-207ENST00000600804 LRRC15Q8TF66 581 aa12.96□□□□□ -0.33
CHMP2A-207ENST00000600804 LARP4BQ92615 738 aaKnown RBP12.96□□□□□ -0.33
CHMP2A-207ENST00000600804 RAD54LQ92698 747 aa12.96□□□□□ -0.33
CHMP2A-207ENST00000600804 CCDC34Q96HJ3 373 aa12.96□□□□□ -0.33
CHMP2A-207ENST00000600804 TNMDQ9H2S6 317 aa12.96□□□□□ -0.33
CHMP2A-207ENST00000600804 RNPEPQ9H4A4 650 aa12.96□□□□□ -0.33
CHMP2A-207ENST00000600804 CYP26B1Q9NR63 512 aa12.96□□□□□ -0.33
CHMP2A-207ENST00000600804 KBTBD4Q9NVX7 518 aa12.96□□□□□ -0.33
CHMP2A-207ENST00000600804 MTCH2Q9Y6C9 303 aa12.96□□□□□ -0.33
CHMP2A-207ENST00000600804 SLC4A7Q9Y6M7 1214 aa12.96□□□□□ -0.33
CHMP2A-207ENST00000600804 IGKV6-21A0A0C4DH24 114 aa12.95□□□□□ -0.34
CHMP2A-207ENST00000600804 MBLAC1A4D2B0 266 aaPredicted RBP12.95□□□□□ -0.34
CHMP2A-207ENST00000600804 MAGEB2O15479 319 aa12.95□□□□□ -0.34
CHMP2A-207ENST00000600804 ACTN4O43707 911 aaKnown RBP12.95□□□□□ -0.34
CHMP2A-207ENST00000600804 GAS2O43903 313 aaKnown RBP12.95□□□□□ -0.34
CHMP2A-207ENST00000600804 DGAT1O75907 488 aa12.95□□□□□ -0.34
CHMP2A-207ENST00000600804 PLA2G4BP0C869 781 aa12.95□□□□□ -0.34
CHMP2A-207ENST00000600804 GNAT1P11488 350 aa12.95□□□□□ -0.34
CHMP2A-207ENST00000600804 LIG1P18858 919 aa12.95□□□□□ -0.34
CHMP2A-207ENST00000600804 POU3F3P20264 500 aaPredicted RBP12.95□□□□□ -0.34
CHMP2A-207ENST00000600804 RFC5P40937 340 aa12.95□□□□□ -0.34
CHMP2A-207ENST00000600804 SLC12A3P55017 1021 aa12.95□□□□□ -0.34
CHMP2A-207ENST00000600804 KANK3Q6NY19 840 aa12.95□□□□□ -0.34
CHMP2A-207ENST00000600804 DEFB128Q7Z7B8 93 aa12.95□□□□□ -0.34
CHMP2A-207ENST00000600804 CKAP2LQ8IYA6 745 aa12.95□□□□□ -0.34
CHMP2A-207ENST00000600804 PDILTQ8N807 584 aa12.95□□□□□ -0.34
CHMP2A-207ENST00000600804 PIGOQ8TEQ8 1089 aa12.95□□□□□ -0.34
CHMP2A-207ENST00000600804 KHSRPQ92945 711 aaKnown RBP eCLIP12.95□□□□□ -0.34
CHMP2A-207ENST00000600804 JPH2Q9BR39 696 aaPredicted RBP12.95□□□□□ -0.34
CHMP2A-207ENST00000600804 TIPINQ9BVW5 301 aa12.95□□□□□ -0.34
CHMP2A-207ENST00000600804 LRRC27Q9C0I9 530 aa12.95□□□□□ -0.34
CHMP2A-207ENST00000600804 MTIF3Q9H2K0 278 aaKnown RBP12.95□□□□□ -0.34
CHMP2A-207ENST00000600804 BHMT2Q9H2M3 363 aa12.95□□□□□ -0.34
CHMP2A-207ENST00000600804 DHX33Q9H6R0 707 aaKnown RBP12.95□□□□□ -0.34
CHMP2A-207ENST00000600804 TRPC6Q9Y210 931 aa12.95□□□□□ -0.34
CHMP2A-207ENST00000600804 MUC6Q6W4X9 2439 aa12.94□□□□□ -0.34
CHMP2A-207ENST00000600804 MYH11P35749 1972 aa12.94□□□□□ -0.34
CHMP2A-207ENST00000600804 ZBBXA8MT70 800 aa12.94□□□□□ -0.34
CHMP2A-207ENST00000600804 E9PMD0 336 aa12.94□□□□□ -0.34
CHMP2A-207ENST00000600804 RPLP2P05387 115 aaKnown RBP12.94□□□□□ -0.34
CHMP2A-207ENST00000600804 SMIM10L2AP0DMW4 78 aa12.94□□□□□ -0.34
CHMP2A-207ENST00000600804 SMIM10L2BP0DMW5 78 aa12.94□□□□□ -0.34
CHMP2A-207ENST00000600804 INSRRP14616 1297 aa12.94□□□□□ -0.34
CHMP2A-207ENST00000600804 ATP2A2P16615 1042 aaKnown RBP12.94□□□□□ -0.34
CHMP2A-207ENST00000600804 MARK3P27448 753 aa12.94□□□□□ -0.34
CHMP2A-207ENST00000600804 PLA2G5P39877 138 aa12.94□□□□□ -0.34
CHMP2A-207ENST00000600804 AMPD3Q01432 767 aa12.94□□□□□ -0.34
CHMP2A-207ENST00000600804 PPFIA1Q13136 1202 aa12.94□□□□□ -0.34
CHMP2A-207ENST00000600804 ZRSR1Q15695 479 aaKnown RBP12.94□□□□□ -0.34
CHMP2A-207ENST00000600804 NBPF20Q3BBV1 942 aa12.94□□□□□ -0.34
CHMP2A-207ENST00000600804 LONRF3Q496Y0 759 aa12.94□□□□□ -0.34
CHMP2A-207ENST00000600804 KRBA2Q6ZNG9 492 aa12.94□□□□□ -0.34
CHMP2A-207ENST00000600804 C1orf186Q6ZWK4 172 aa12.94□□□□□ -0.34
CHMP2A-207ENST00000600804 SV2BQ7L1I2 683 aa12.94□□□□□ -0.34
CHMP2A-207ENST00000600804 CEP57L1Q8IYX8 460 aa12.94□□□□□ -0.34
CHMP2A-207ENST00000600804 RPUSD2Q8IZ73 545 aaKnown RBP12.94□□□□□ -0.34
CHMP2A-207ENST00000600804 DHX58Q96C10 678 aa12.94□□□□□ -0.34
CHMP2A-207ENST00000600804 CEP170P1Q96L14 293 aa12.94□□□□□ -0.34
CHMP2A-207ENST00000600804 CTAGE1Q96RT6 745 aa12.94□□□□□ -0.34
CHMP2A-207ENST00000600804 SEPT9Q9UHD8 586 aaPredicted RBP12.94□□□□□ -0.34
CHMP2A-207ENST00000600804 GTF2IRD1Q9UHL9 959 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms