RNA–Protein interactions for RNA: ENST00000600689.1

UPF1-210, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 2

Gene UPF1, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-210ENST00000600689 XRCC5P13010 732 aaKnown RBP19.89■□□□□ 0.78
UPF1-210ENST00000600689 MMP14P50281 582 aa19.89■□□□□ 0.78
UPF1-210ENST00000600689 NAIF1Q69YI7 327 aaPredicted RBP19.89■□□□□ 0.78
UPF1-210ENST00000600689 FAM129AQ9BZQ8 928 aa19.89■□□□□ 0.78
UPF1-210ENST00000600689 DAAM1Q9Y4D1 1078 aa19.89■□□□□ 0.78
UPF1-210ENST00000600689 IGSF9BQ9UPX0 1349 aa19.89■□□□□ 0.78
UPF1-210ENST00000600689 RSPH10B2B2RC85 870 aa19.89■□□□□ 0.77
UPF1-210ENST00000600689 RSPH10BP0C881 870 aa19.89■□□□□ 0.77
UPF1-210ENST00000600689 PSMD2Q13200 908 aa19.89■□□□□ 0.77
UPF1-210ENST00000600689 COBLL1Q53SF7 1204 aa19.89■□□□□ 0.77
UPF1-210ENST00000600689 ERMARDQ5T6L9 678 aa19.89■□□□□ 0.77
UPF1-210ENST00000600689 NT5DC3Q86UY8 548 aa19.89■□□□□ 0.77
UPF1-210ENST00000600689 RNF25Q96BH1 459 aaPredicted RBP19.89■□□□□ 0.77
UPF1-210ENST00000600689 C18orf8Q96DM3 657 aa19.89■□□□□ 0.77
UPF1-210ENST00000600689 SNED1Q8TER0 1413 aa19.89■□□□□ 0.77
UPF1-210ENST00000600689 BBOX1O75936 387 aa19.89■□□□□ 0.77
UPF1-210ENST00000600689 AFPP02771 609 aaKnown RBP19.89■□□□□ 0.77
UPF1-210ENST00000600689 PMS2P54278 862 aa19.89■□□□□ 0.77
UPF1-210ENST00000600689 XRCC4Q13426 336 aa19.89■□□□□ 0.77
UPF1-210ENST00000600689 SFR1Q86XK3 245 aa19.89■□□□□ 0.77
UPF1-210ENST00000600689 SLC35G2Q8TBE7 412 aa19.89■□□□□ 0.77
UPF1-210ENST00000600689 KCNV2Q8TDN2 545 aa19.89■□□□□ 0.77
UPF1-210ENST00000600689 CUL5Q93034 780 aa19.89■□□□□ 0.77
UPF1-210ENST00000600689 SWAP70Q9UH65 585 aa19.89■□□□□ 0.77
UPF1-210ENST00000600689 ABCB11O95342 1321 aa19.89■□□□□ 0.77
UPF1-210ENST00000600689 LRRN2O75325 713 aa19.88■□□□□ 0.77
UPF1-210ENST00000600689 AKAP3O75969 853 aa19.88■□□□□ 0.77
UPF1-210ENST00000600689 RDH13Q8NBN7 331 aa19.88■□□□□ 0.77
UPF1-210ENST00000600689 TRIM33Q9UPN9 1127 aa19.88■□□□□ 0.77
UPF1-210ENST00000600689 DDX60LQ5H9U9 1706 aaKnown RBP19.88■□□□□ 0.77
UPF1-210ENST00000600689 A0A1B0GUA9 196 aa19.88■□□□□ 0.77
UPF1-210ENST00000600689 C21orf2O43822 256 aa19.88■□□□□ 0.77
UPF1-210ENST00000600689 PLCG2P16885 1265 aa19.88■□□□□ 0.77
UPF1-210ENST00000600689 TMEM119Q4V9L6 283 aa19.88■□□□□ 0.77
UPF1-210ENST00000600689 KCTD1Q719H9 257 aa19.88■□□□□ 0.77
UPF1-210ENST00000600689 VPS36Q86VN1 386 aa19.88■□□□□ 0.77
UPF1-210ENST00000600689 ATP8B4Q8TF62 1192 aa19.88■□□□□ 0.77
UPF1-210ENST00000600689 CCDC188H7C350 402 aa19.87■□□□□ 0.77
UPF1-210ENST00000600689 KIF1CO43896 1103 aaKnown RBP19.87■□□□□ 0.77
UPF1-210ENST00000600689 UBOX5O94941 541 aa19.87■□□□□ 0.77
UPF1-210ENST00000600689 CHRM1P11229 460 aaPredicted RBP19.87■□□□□ 0.77
UPF1-210ENST00000600689 CYP11B2P19099 503 aa19.87■□□□□ 0.77
UPF1-210ENST00000600689 SLC8A1P32418 973 aa19.87■□□□□ 0.77
UPF1-210ENST00000600689 SNAP25P60880 206 aa19.87■□□□□ 0.77
UPF1-210ENST00000600689 C16orf86Q6ZW13 317 aa19.87■□□□□ 0.77
UPF1-210ENST00000600689 GDAP1Q8TB36 358 aa19.87■□□□□ 0.77
UPF1-210ENST00000600689 NEK9Q8TD19 979 aa19.87■□□□□ 0.77
UPF1-210ENST00000600689 CEP63Q96MT8 703 aa19.87■□□□□ 0.77
UPF1-210ENST00000600689 KCTD10Q9H3F6 313 aa19.87■□□□□ 0.77
UPF1-210ENST00000600689 TAS2R14Q9NYV8 317 aa19.87■□□□□ 0.77
UPF1-210ENST00000600689 GGA2Q9UJY4 613 aa19.87■□□□□ 0.77
UPF1-210ENST00000600689 PPIP5K2O43314 1243 aa19.87■□□□□ 0.77
UPF1-210ENST00000600689 ANP32DO95626 131 aa19.87■□□□□ 0.77
UPF1-210ENST00000600689 CREB1P16220 341 aa19.87■□□□□ 0.77
UPF1-210ENST00000600689 TAL1P17542 331 aaPredicted RBP19.87■□□□□ 0.77
UPF1-210ENST00000600689 CCDC50Q8IVM0 306 aa19.87■□□□□ 0.77
UPF1-210ENST00000600689 ARHGEF26Q96DR7 871 aa19.87■□□□□ 0.77
UPF1-210ENST00000600689 LZTS2Q9BRK4 669 aa19.87■□□□□ 0.77
UPF1-210ENST00000600689 FAM114A2Q9NRY5 505 aa19.87■□□□□ 0.77
UPF1-210ENST00000600689 DIAPH2O60879 1101 aa19.87■□□□□ 0.77
UPF1-210ENST00000600689 MED24O75448 989 aa19.87■□□□□ 0.77
UPF1-210ENST00000600689 DCAF12L1Q5VU92 463 aa19.87■□□□□ 0.77
UPF1-210ENST00000600689 HOOK3Q86VS8 718 aa19.87■□□□□ 0.77
UPF1-210ENST00000600689 SPICE1Q8N0Z3 855 aa19.87■□□□□ 0.77
UPF1-210ENST00000600689 AGAP11Q8TF27 550 aa19.87■□□□□ 0.77
UPF1-210ENST00000600689 RSRC1Q96IZ7 334 aaKnown RBP19.87■□□□□ 0.77
UPF1-210ENST00000600689 DAGLAQ9Y4D2 1042 aa19.87■□□□□ 0.77
UPF1-210ENST00000600689 MYH7BA7E2Y1 1941 aa19.86■□□□□ 0.77
UPF1-210ENST00000600689 C5orf60A6NFR6 353 aa19.86■□□□□ 0.77
UPF1-210ENST00000600689 HOXA10P31260 410 aaPredicted RBP19.86■□□□□ 0.77
UPF1-210ENST00000600689 KCNJ1P48048 391 aa19.86■□□□□ 0.77
UPF1-210ENST00000600689 PALB2Q86YC2 1186 aa19.86■□□□□ 0.77
UPF1-210ENST00000600689 FAM167BQ9BTA0 163 aa19.86■□□□□ 0.77
UPF1-210ENST00000600689 LRRC27Q9C0I9 530 aa19.86■□□□□ 0.77
UPF1-210ENST00000600689 KCNK9Q9NPC2 374 aa19.86■□□□□ 0.77
UPF1-210ENST00000600689 PPEF1O14829 653 aaPredicted RBP19.86■□□□□ 0.77
UPF1-210ENST00000600689 MGRN1O60291 552 aa19.86■□□□□ 0.77
UPF1-210ENST00000600689 GCNT3O95395 438 aa19.86■□□□□ 0.77
UPF1-210ENST00000600689 GNA14O95837 355 aa19.86■□□□□ 0.77
UPF1-210ENST00000600689 MYBL1P10243 752 aa19.86■□□□□ 0.77
UPF1-210ENST00000600689 MARCKSL1P49006 195 aa19.86■□□□□ 0.77
UPF1-210ENST00000600689 PLS1Q14651 629 aa19.86■□□□□ 0.77
UPF1-210ENST00000600689 DOK7Q18PE1 504 aa19.86■□□□□ 0.77
UPF1-210ENST00000600689 KRT27Q7Z3Y8 459 aa19.86■□□□□ 0.77
UPF1-210ENST00000600689 C1orf131Q8NDD1 294 aaKnown RBP19.86■□□□□ 0.77
UPF1-210ENST00000600689 LMBR1Q8WVP7 490 aa19.86■□□□□ 0.77
UPF1-210ENST00000600689 CALR3Q96L12 384 aaKnown RBP19.86■□□□□ 0.77
UPF1-210ENST00000600689 FGFR1OP2Q9NVK5 253 aa19.86■□□□□ 0.77
UPF1-210ENST00000600689 EVI5O60447 810 aa19.85■□□□□ 0.77
UPF1-210ENST00000600689 SLC27A3Q5K4L6 730 aa19.85■□□□□ 0.77
UPF1-210ENST00000600689 TRPM8Q7Z2W7 1104 aa19.85■□□□□ 0.77
UPF1-210ENST00000600689 CERS5Q8N5B7 392 aa19.85■□□□□ 0.77
UPF1-210ENST00000600689 LNX1Q8TBB1 728 aaPredicted RBP19.85■□□□□ 0.77
UPF1-210ENST00000600689 MICAL1Q8TDZ2 1067 aa19.85■□□□□ 0.77
UPF1-210ENST00000600689 MYH1P12882 1939 aa19.85■□□□□ 0.77
UPF1-210ENST00000600689 MYH4Q9Y623 1939 aa19.85■□□□□ 0.77
UPF1-210ENST00000600689 MPHOSPH10O00566 681 aaKnown RBP19.85■□□□□ 0.77
UPF1-210ENST00000600689 SCNN1DP51172 638 aa19.85■□□□□ 0.77
UPF1-210ENST00000600689 LONRF1Q17RB8 773 aa19.85■□□□□ 0.77
UPF1-210ENST00000600689 ZNF746Q6NUN9 644 aaPredicted RBP19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms