RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 TBX21Q9UL17 535 aa18.53■□□□□ 0.56
USHBP1-210ENST00000600286 KAT6AQ92794 2004 aa18.52■□□□□ 0.56
USHBP1-210ENST00000600286 CKBP12277 381 aa18.52■□□□□ 0.56
USHBP1-210ENST00000600286 SLC12A3P55017 1021 aa18.52■□□□□ 0.56
USHBP1-210ENST00000600286 MRPS6P82932 125 aaKnown RBP18.52■□□□□ 0.56
USHBP1-210ENST00000600286 RBL2Q08999 1139 aa18.52■□□□□ 0.56
USHBP1-210ENST00000600286 PPP2R5AQ15172 486 aa18.52■□□□□ 0.56
USHBP1-210ENST00000600286 ODR4Q5SWX8 454 aa18.52■□□□□ 0.56
USHBP1-210ENST00000600286 KANK3Q6NY19 840 aa18.52■□□□□ 0.56
USHBP1-210ENST00000600286 MAEAQ7L5Y9 396 aa18.52■□□□□ 0.56
USHBP1-210ENST00000600286 RHPN2Q8IUC4 686 aa18.52■□□□□ 0.56
USHBP1-210ENST00000600286 TMEM143Q96AN5 459 aa18.52■□□□□ 0.56
USHBP1-210ENST00000600286 ZBTB10Q96DT7 871 aa18.52■□□□□ 0.56
USHBP1-210ENST00000600286 CEP89Q96ST8 783 aa18.52■□□□□ 0.56
USHBP1-210ENST00000600286 BLOC1S4Q9NUP1 217 aa18.52■□□□□ 0.56
USHBP1-210ENST00000600286 HOOK1Q9UJC3 728 aaKnown RBP18.52■□□□□ 0.56
USHBP1-210ENST00000600286 SOX1O00570 391 aaPredicted RBP18.51■□□□□ 0.55
USHBP1-210ENST00000600286 SLFN14P0C7P3 912 aa18.51■□□□□ 0.55
USHBP1-210ENST00000600286 GUCY2CP25092 1073 aa18.51■□□□□ 0.55
USHBP1-210ENST00000600286 RFC2P35250 354 aa18.51■□□□□ 0.55
USHBP1-210ENST00000600286 NDUFA8P51970 172 aa18.51■□□□□ 0.55
USHBP1-210ENST00000600286 C1orf186Q6ZWK4 172 aa18.51■□□□□ 0.55
USHBP1-210ENST00000600286 LRRC8DQ7L1W4 858 aa18.51■□□□□ 0.55
USHBP1-210ENST00000600286 RPUSD2Q8IZ73 545 aaKnown RBP18.51■□□□□ 0.55
USHBP1-210ENST00000600286 CNNM3Q8NE01 707 aa18.51■□□□□ 0.55
USHBP1-210ENST00000600286 PRPF31Q8WWY3 499 aaKnown RBP18.51■□□□□ 0.55
USHBP1-210ENST00000600286 NLRP7Q8WX94 980 aa18.51■□□□□ 0.55
USHBP1-210ENST00000600286 INO80BQ9C086 356 aaPredicted RBP18.51■□□□□ 0.55
USHBP1-210ENST00000600286 TNMDQ9H2S6 317 aa18.51■□□□□ 0.55
USHBP1-210ENST00000600286 GINS2Q9Y248 185 aa18.51■□□□□ 0.55
USHBP1-210ENST00000600286 COL4A3BPQ9Y5P4 624 aa18.51■□□□□ 0.55
USHBP1-210ENST00000600286 TRPV2Q9Y5S1 764 aa18.51■□□□□ 0.55
USHBP1-210ENST00000600286 FAM237AA0A1B0GTK4 181 aa18.5■□□□□ 0.55
USHBP1-210ENST00000600286 TRIM43BA6NCK2 446 aa18.5■□□□□ 0.55
USHBP1-210ENST00000600286 TBCAO75347 108 aaKnown RBP18.5■□□□□ 0.55
USHBP1-210ENST00000600286 VTNP04004 478 aa18.5■□□□□ 0.55
USHBP1-210ENST00000600286 CTSHP09668 335 aa18.5■□□□□ 0.55
USHBP1-210ENST00000600286 CYP2C18P33260 490 aa18.5■□□□□ 0.55
USHBP1-210ENST00000600286 NLRP11P59045 1033 aaKnown RBP18.5■□□□□ 0.55
USHBP1-210ENST00000600286 TRIM71Q2Q1W2 868 aaKnown RBP18.5■□□□□ 0.55
USHBP1-210ENST00000600286 ZNF618Q5T7W0 954 aa18.5■□□□□ 0.55
USHBP1-210ENST00000600286 MFSD5Q6N075 450 aa18.5■□□□□ 0.55
USHBP1-210ENST00000600286 SH3RF1Q7Z6J0 888 aa18.5■□□□□ 0.55
USHBP1-210ENST00000600286 ZNF410Q86VK4 478 aa18.5■□□□□ 0.55
USHBP1-210ENST00000600286 LINC01465Q8N7H1 131 aa18.5■□□□□ 0.55
USHBP1-210ENST00000600286 DHX38Q92620 1227 aaKnown RBP18.5■□□□□ 0.55
USHBP1-210ENST00000600286 TRIM43Q96BQ3 446 aaPredicted RBP18.5■□□□□ 0.55
USHBP1-210ENST00000600286 CTAGE1Q96RT6 745 aa18.5■□□□□ 0.55
USHBP1-210ENST00000600286 CELF4Q9BZC1 486 aaKnown RBP18.5■□□□□ 0.55
USHBP1-210ENST00000600286 GCOM2Q9BZD3 368 aaPredicted RBP18.5■□□□□ 0.55
USHBP1-210ENST00000600286 POLR3FQ9H1D9 316 aaPredicted RBP18.5■□□□□ 0.55
USHBP1-210ENST00000600286 C17orf75Q9HAS0 396 aa18.5■□□□□ 0.55
USHBP1-210ENST00000600286 ODF2LQ9ULJ1 636 aa18.5■□□□□ 0.55
USHBP1-210ENST00000600286 ZMYND8Q9ULU4 1186 aaPredicted RBP18.5■□□□□ 0.55
USHBP1-210ENST00000600286 HPSEQ9Y251 543 aa18.5■□□□□ 0.55
USHBP1-210ENST00000600286 CDY2AQ9Y6F7 541 aa18.5■□□□□ 0.55
USHBP1-210ENST00000600286 FAM13AO94988 1023 aa18.49■□□□□ 0.55
USHBP1-210ENST00000600286 ZNF202O95125 648 aa18.49■□□□□ 0.55
USHBP1-210ENST00000600286 IQCF3P0C7M6 154 aa18.49■□□□□ 0.55
USHBP1-210ENST00000600286 CRYBB1P53674 252 aaPredicted RBP18.49■□□□□ 0.55
USHBP1-210ENST00000600286 SMTNP53814 917 aa18.49■□□□□ 0.55
USHBP1-210ENST00000600286 CCL23P55773 120 aa18.49■□□□□ 0.55
USHBP1-210ENST00000600286 FAM160A1Q05DH4 1040 aa18.49■□□□□ 0.55
USHBP1-210ENST00000600286 TMEM62Q0P6H9 643 aa18.49■□□□□ 0.55
USHBP1-210ENST00000600286 LAMTOR4Q0VGL1 99 aa18.49■□□□□ 0.55
USHBP1-210ENST00000600286 E2F4Q16254 413 aa18.49■□□□□ 0.55
USHBP1-210ENST00000600286 FAM26DQ5JW98 314 aa18.49■□□□□ 0.55
USHBP1-210ENST00000600286 USP38Q8NB14 1042 aa18.49■□□□□ 0.55
USHBP1-210ENST00000600286 ZHX3Q9H4I2 956 aa18.49■□□□□ 0.55
USHBP1-210ENST00000600286 XPNPEP1Q9NQW7 623 aa18.49■□□□□ 0.55
USHBP1-210ENST00000600286 LARSQ9P2J5 1176 aaKnown RBP18.49■□□□□ 0.55
USHBP1-210ENST00000600286 SERTAD1Q9UHV2 236 aa18.49■□□□□ 0.55
USHBP1-210ENST00000600286 A0A087X0B3 334 aa18.48■□□□□ 0.55
USHBP1-210ENST00000600286 KINO60870 393 aaKnown RBP18.48■□□□□ 0.55
USHBP1-210ENST00000600286 HIP1RO75146 1068 aa18.48■□□□□ 0.55
USHBP1-210ENST00000600286 SRGAP2CP0DJJ0 459 aa18.48■□□□□ 0.55
USHBP1-210ENST00000600286 SYN1P17600 705 aa18.48■□□□□ 0.55
USHBP1-210ENST00000600286 ARL2P36404 184 aa18.48■□□□□ 0.55
USHBP1-210ENST00000600286 PHKA2P46019 1235 aa18.48■□□□□ 0.55
USHBP1-210ENST00000600286 NCBP1Q09161 790 aaKnown RBP18.48■□□□□ 0.55
USHBP1-210ENST00000600286 RAD51AP2Q09MP3 1159 aa18.48■□□□□ 0.55
USHBP1-210ENST00000600286 PPIGQ13427 754 aaKnown RBP eCLIP18.48■□□□□ 0.55
USHBP1-210ENST00000600286 KIZQ2M2Z5 673 aa18.48■□□□□ 0.55
USHBP1-210ENST00000600286 NAALADL2Q58DX5 795 aa18.48■□□□□ 0.55
USHBP1-210ENST00000600286 FAM43BQ6ZT52 329 aaPredicted RBP18.48■□□□□ 0.55
USHBP1-210ENST00000600286 DDX12PQ92771 950 aa18.48■□□□□ 0.55
USHBP1-210ENST00000600286 CCDC47Q96A33 483 aaKnown RBP18.48■□□□□ 0.55
USHBP1-210ENST00000600286 NLRP4Q96MN2 994 aa18.48■□□□□ 0.55
USHBP1-210ENST00000600286 RUSC1Q9BVN2 902 aa18.48■□□□□ 0.55
USHBP1-210ENST00000600286 SQORQ9Y6N5 450 aa18.48■□□□□ 0.55
USHBP1-210ENST00000600286 MYL1P05976 194 aa18.47■□□□□ 0.55
USHBP1-210ENST00000600286 MAGEA10P43363 369 aaPredicted RBP18.47■□□□□ 0.55
USHBP1-210ENST00000600286 GPC3P51654 580 aa18.47■□□□□ 0.55
USHBP1-210ENST00000600286 FPGSQ05932 587 aa18.47■□□□□ 0.55
USHBP1-210ENST00000600286 POU5F1BQ06416 359 aa18.47■□□□□ 0.55
USHBP1-210ENST00000600286 DMP1Q13316 513 aaPredicted RBP18.47■□□□□ 0.55
USHBP1-210ENST00000600286 MKRN4PQ13434 485 aaPredicted RBP18.47■□□□□ 0.55
USHBP1-210ENST00000600286 LONRF3Q496Y0 759 aa18.47■□□□□ 0.55
USHBP1-210ENST00000600286 DYMQ7RTS9 669 aa18.47■□□□□ 0.55
USHBP1-210ENST00000600286 ZBTB8OSQ8IWT0 167 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms