RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 PRPF31Q8WWY3 499 aaKnown RBP15.3■□□□□ 0.04
VRK3-219ENST00000600137 SLC7A3Q8WY07 619 aa15.3■□□□□ 0.04
VRK3-219ENST00000600137 ZNF668Q96K58 619 aaPredicted RBP15.3■□□□□ 0.04
VRK3-219ENST00000600137 JPH2Q9BR39 696 aaPredicted RBP15.3■□□□□ 0.04
VRK3-219ENST00000600137 NT5C3AQ9H0P0 336 aa15.3■□□□□ 0.04
VRK3-219ENST00000600137 TRIOBPQ9H2D6 2365 aa15.3■□□□□ 0.04
VRK3-219ENST00000600137 POLD4Q9HCU8 107 aa15.3■□□□□ 0.04
VRK3-219ENST00000600137 GPRC5CQ9NQ84 441 aa15.3■□□□□ 0.04
VRK3-219ENST00000600137 CHMP5Q9NZZ3 219 aa15.3■□□□□ 0.04
VRK3-219ENST00000600137 SQORQ9Y6N5 450 aa15.3■□□□□ 0.04
VRK3-219ENST00000600137 USO1O60763 962 aaKnown RBP15.29■□□□□ 0.04
VRK3-219ENST00000600137 CRYBB1P53674 252 aaPredicted RBP15.29■□□□□ 0.04
VRK3-219ENST00000600137 MAPK7Q13164 816 aa15.29■□□□□ 0.04
VRK3-219ENST00000600137 ZRSR1Q15695 479 aaKnown RBP15.29■□□□□ 0.04
VRK3-219ENST00000600137 E2F4Q16254 413 aa15.29■□□□□ 0.04
VRK3-219ENST00000600137 RESP18Q5W5W9 173 aa15.29■□□□□ 0.04
VRK3-219ENST00000600137 EXOC8Q8IYI6 725 aa15.29■□□□□ 0.04
VRK3-219ENST00000600137 RPUSD2Q8IZ73 545 aaKnown RBP15.29■□□□□ 0.04
VRK3-219ENST00000600137 DAW1Q8N136 415 aa15.29■□□□□ 0.04
VRK3-219ENST00000600137 ASAP3Q8TDY4 903 aa15.29■□□□□ 0.04
VRK3-219ENST00000600137 SPATA32Q96LK8 384 aa15.29■□□□□ 0.04
VRK3-219ENST00000600137 PPP1R16BQ96T49 567 aa15.29■□□□□ 0.04
VRK3-219ENST00000600137 MTRQ99707 1265 aa15.29■□□□□ 0.04
VRK3-219ENST00000600137 RUSC1Q9BVN2 902 aa15.29■□□□□ 0.04
VRK3-219ENST00000600137 PANK2Q9BZ23 570 aa15.29■□□□□ 0.04
VRK3-219ENST00000600137 UBE2OQ9C0C9 1292 aaKnown RBP15.29■□□□□ 0.04
VRK3-219ENST00000600137 IFT122Q9HBG6 1241 aa15.29■□□□□ 0.04
VRK3-219ENST00000600137 GDPD2Q9HCC8 539 aa15.29■□□□□ 0.04
VRK3-219ENST00000600137 AKT3Q9Y243 479 aa15.29■□□□□ 0.04
VRK3-219ENST00000600137 NOC2LQ9Y3T9 749 aaKnown RBP15.29■□□□□ 0.04
VRK3-219ENST00000600137 LAMA3Q16787 3333 aa15.28■□□□□ 0.04
VRK3-219ENST00000600137 ARHGEF35A5YM69 484 aa15.28■□□□□ 0.04
VRK3-219ENST00000600137 GAS2O43903 313 aaKnown RBP15.28■□□□□ 0.04
VRK3-219ENST00000600137 FGBP02675 491 aa15.28■□□□□ 0.04
VRK3-219ENST00000600137 PLA2G4BP0C869 781 aa15.28■□□□□ 0.04
VRK3-219ENST00000600137 GHRP10912 638 aa15.28■□□□□ 0.04
VRK3-219ENST00000600137 GLRA2P23416 452 aa15.28■□□□□ 0.04
VRK3-219ENST00000600137 ME1P48163 572 aa15.28■□□□□ 0.04
VRK3-219ENST00000600137 DNM2P50570 870 aa15.28■□□□□ 0.04
VRK3-219ENST00000600137 LAMTOR4Q0VGL1 99 aa15.28■□□□□ 0.04
VRK3-219ENST00000600137 ADALQ6DHV7 355 aa15.28■□□□□ 0.04
VRK3-219ENST00000600137 RTN4RL1Q86UN2 441 aaPredicted RBP15.28■□□□□ 0.04
VRK3-219ENST00000600137 HERVK_113Q902F9 699 aa15.28■□□□□ 0.04
VRK3-219ENST00000600137 RAD54LQ92698 747 aa15.28■□□□□ 0.04
VRK3-219ENST00000600137 CALML4Q96GE6 196 aa15.28■□□□□ 0.04
VRK3-219ENST00000600137 MAP7D2Q96T17 732 aa15.28■□□□□ 0.04
VRK3-219ENST00000600137 OSMRQ99650 979 aa15.28■□□□□ 0.04
VRK3-219ENST00000600137 SCAND2PQ9GZW5 306 aaPredicted RBP15.28■□□□□ 0.04
VRK3-219ENST00000600137 ATP6V0A4Q9HBG4 840 aa15.28■□□□□ 0.04
VRK3-219ENST00000600137 CXXC1Q9P0U4 656 aaPredicted RBP15.28■□□□□ 0.04
VRK3-219ENST00000600137 COL4A3BPQ9Y5P4 624 aa15.28■□□□□ 0.04
VRK3-219ENST00000600137 PTPRSQ13332 1948 aa15.27■□□□□ 0.04
VRK3-219ENST00000600137 A0A087WZ62 844 aa15.27■□□□□ 0.04
VRK3-219ENST00000600137 FAM237AA0A1B0GTK4 181 aa15.27■□□□□ 0.04
VRK3-219ENST00000600137 ASAP2O43150 1006 aa15.27■□□□□ 0.04
VRK3-219ENST00000600137 PFKMP08237 780 aa15.27■□□□□ 0.04
VRK3-219ENST00000600137 DARSP14868 501 aaKnown RBP15.27■□□□□ 0.04
VRK3-219ENST00000600137 NCLP19338 710 aaKnown RBP15.27■□□□□ 0.04
VRK3-219ENST00000600137 EIF4BP23588 611 aaKnown RBP15.27■□□□□ 0.04
VRK3-219ENST00000600137 CD52P31358 61 aa15.27■□□□□ 0.04
VRK3-219ENST00000600137 MCM6Q14566 821 aa15.27■□□□□ 0.04
VRK3-219ENST00000600137 MAEAQ7L5Y9 396 aa15.27■□□□□ 0.04
VRK3-219ENST00000600137 IFNLR1Q8IU57 520 aaPredicted RBP15.27■□□□□ 0.04
VRK3-219ENST00000600137 RHPN2Q8IUC4 686 aa15.27■□□□□ 0.04
VRK3-219ENST00000600137 ZNF710Q8N1W2 664 aa15.27■□□□□ 0.04
VRK3-219ENST00000600137 TCP11Q8WWU5 503 aa15.27■□□□□ 0.04
VRK3-219ENST00000600137 PSPC1Q8WXF1 523 aaKnown RBP15.27■□□□□ 0.04
VRK3-219ENST00000600137 BSNDQ8WZ55 320 aa15.27■□□□□ 0.04
VRK3-219ENST00000600137 FDXACB1Q9BRP7 624 aaPredicted RBP15.27■□□□□ 0.04
VRK3-219ENST00000600137 TMX1Q9H3N1 280 aa15.27■□□□□ 0.04
VRK3-219ENST00000600137 MINDY3Q9H8M7 445 aa15.27■□□□□ 0.04
VRK3-219ENST00000600137 ERVK-5Q9HDB9 667 aa15.27■□□□□ 0.04
VRK3-219ENST00000600137 PADI3Q9ULW8 664 aa15.27■□□□□ 0.04
VRK3-219ENST00000600137 MICAL3Q7RTP6 2002 aa15.26■□□□□ 0.03
VRK3-219ENST00000600137 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.26■□□□□ 0.03
VRK3-219ENST00000600137 CSDE1O75534 798 aaKnown RBP15.26■□□□□ 0.03
VRK3-219ENST00000600137 CMA1P23946 247 aa15.26■□□□□ 0.03
VRK3-219ENST00000600137 GUCY2CP25092 1073 aa15.26■□□□□ 0.03
VRK3-219ENST00000600137 CDC42EP1Q00587 391 aa15.26■□□□□ 0.03
VRK3-219ENST00000600137 POU5F1BQ06416 359 aa15.26■□□□□ 0.03
VRK3-219ENST00000600137 CAPSQ13938 189 aa15.26■□□□□ 0.03
VRK3-219ENST00000600137 CNKSR3Q6P9H4 555 aa15.26■□□□□ 0.03
VRK3-219ENST00000600137 PSRC1Q6PGN9 363 aaPredicted RBP15.26■□□□□ 0.03
VRK3-219ENST00000600137 TSHZ1Q6ZSZ6 1077 aa15.26■□□□□ 0.03
VRK3-219ENST00000600137 OTOP2Q7RTS6 562 aa15.26■□□□□ 0.03
VRK3-219ENST00000600137 ZNF410Q86VK4 478 aa15.26■□□□□ 0.03
VRK3-219ENST00000600137 FAM228AQ86W67 206 aa15.26■□□□□ 0.03
VRK3-219ENST00000600137 USP38Q8NB14 1042 aa15.26■□□□□ 0.03
VRK3-219ENST00000600137 MCPH1Q8NEM0 835 aa15.26■□□□□ 0.03
VRK3-219ENST00000600137 LINC01599Q8WXQ3 324 aa15.26■□□□□ 0.03
VRK3-219ENST00000600137 CDK5RAP3Q96JB5 506 aa15.26■□□□□ 0.03
VRK3-219ENST00000600137 POLR3FQ9H1D9 316 aaPredicted RBP15.26■□□□□ 0.03
VRK3-219ENST00000600137 GINS2Q9Y248 185 aa15.26■□□□□ 0.03
VRK3-219ENST00000600137 HPSEQ9Y251 543 aa15.26■□□□□ 0.03
VRK3-219ENST00000600137 NPHP3-ACAD11A0A0J9YXS1 232 aa15.25■□□□□ 0.03
VRK3-219ENST00000600137 MGEA5O60502 916 aa15.25■□□□□ 0.03
VRK3-219ENST00000600137 PTENP60484 403 aa15.25■□□□□ 0.03
VRK3-219ENST00000600137 DSC3Q14574 896 aa15.25■□□□□ 0.03
VRK3-219ENST00000600137 MXD4Q14582 209 aaPredicted RBP15.25■□□□□ 0.03
VRK3-219ENST00000600137 RRAGBQ5VZM2 374 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms