RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 NLRP7Q8WX94 980 aa21.07■□□□□ 0.96
PNKP-213ENST00000599543 ZNF668Q96K58 619 aaPredicted RBP21.07■□□□□ 0.96
PNKP-213ENST00000599543 SLKQ9H2G2 1235 aaPredicted RBP21.07■□□□□ 0.96
PNKP-213ENST00000599543 PRKAG3Q9UGI9 489 aa21.07■□□□□ 0.96
PNKP-213ENST00000599543 HOXA2O43364 376 aa21.06■□□□□ 0.96
PNKP-213ENST00000599543 TBX10O75333 385 aa21.06■□□□□ 0.96
PNKP-213ENST00000599543 IRS1P35568 1242 aa21.06■□□□□ 0.96
PNKP-213ENST00000599543 NDUFV1P49821 464 aa21.06■□□□□ 0.96
PNKP-213ENST00000599543 DLX2Q07687 328 aaPredicted RBP21.06■□□□□ 0.96
PNKP-213ENST00000599543 DSC3Q14574 896 aa21.06■□□□□ 0.96
PNKP-213ENST00000599543 CSPP1Q1MSJ5 1256 aa21.06■□□□□ 0.96
PNKP-213ENST00000599543 MTERF2Q49AM1 385 aa21.06■□□□□ 0.96
PNKP-213ENST00000599543 XKR3Q5GH77 459 aa21.06■□□□□ 0.96
PNKP-213ENST00000599543 NECAB1Q8N987 351 aa21.06■□□□□ 0.96
PNKP-213ENST00000599543 ETNPPLQ8TBG4 499 aa21.06■□□□□ 0.96
PNKP-213ENST00000599543 MBOAT7Q96N66 472 aa21.06■□□□□ 0.96
PNKP-213ENST00000599543 LRFN3Q9BTN0 628 aa21.06■□□□□ 0.96
PNKP-213ENST00000599543 BACH2Q9BYV9 841 aa21.06■□□□□ 0.96
PNKP-213ENST00000599543 UPF2Q9HAU5 1272 aaKnown RBP21.06■□□□□ 0.96
PNKP-213ENST00000599543 TYW1Q9NV66 732 aaKnown RBP21.06■□□□□ 0.96
PNKP-213ENST00000599543 KCNJ14Q9UNX9 436 aa21.06■□□□□ 0.96
PNKP-213ENST00000599543 STK36Q9NRP7 1315 aa21.05■□□□□ 0.96
PNKP-213ENST00000599543 CCDC194A0A1B0GVG4 234 aa21.05■□□□□ 0.96
PNKP-213ENST00000599543 LINC01565O15544 149 aa21.05■□□□□ 0.96
PNKP-213ENST00000599543 DARSP14868 501 aaKnown RBP21.05■□□□□ 0.96
PNKP-213ENST00000599543 RBM25P49756 843 aaKnown RBP21.05■□□□□ 0.96
PNKP-213ENST00000599543 FAM189BP81408 668 aa21.05■□□□□ 0.96
PNKP-213ENST00000599543 UBE3AQ05086 875 aa21.05■□□□□ 0.96
PNKP-213ENST00000599543 ZP2Q05996 745 aa21.05■□□□□ 0.96
PNKP-213ENST00000599543 TARBP2Q15633 366 aaKnown RBP21.05■□□□□ 0.96
PNKP-213ENST00000599543 LETM2Q2VYF4 491 aa21.05■□□□□ 0.96
PNKP-213ENST00000599543 ADGRD2Q7Z7M1 963 aa21.05■□□□□ 0.96
PNKP-213ENST00000599543 THNSL1Q8IYQ7 743 aa21.05■□□□□ 0.96
PNKP-213ENST00000599543 COLGALT1Q8NBJ5 622 aa21.05■□□□□ 0.96
PNKP-213ENST00000599543 MICAL1Q8TDZ2 1067 aa21.05■□□□□ 0.96
PNKP-213ENST00000599543 PHF20Q9BVI0 1012 aa21.05■□□□□ 0.96
PNKP-213ENST00000599543 NIFKQ9BYG3 293 aaKnown RBP21.05■□□□□ 0.96
PNKP-213ENST00000599543 TLR9Q9NR96 1032 aa21.05■□□□□ 0.96
PNKP-213ENST00000599543 CD207Q9UJ71 328 aa21.05■□□□□ 0.96
PNKP-213ENST00000599543 FAM86C2PA6NEL3 165 aa21.04■□□□□ 0.96
PNKP-213ENST00000599543 SLC37A4O43826 429 aa21.04■□□□□ 0.96
PNKP-213ENST00000599543 FGF18O76093 207 aa21.04■□□□□ 0.96
PNKP-213ENST00000599543 LAG3P18627 525 aa21.04■□□□□ 0.96
PNKP-213ENST00000599543 NRIP1P48552 1158 aa21.04■□□□□ 0.96
PNKP-213ENST00000599543 ADAM15Q13444 863 aa21.04■□□□□ 0.96
PNKP-213ENST00000599543 SMAD4Q13485 552 aaKnown RBP21.04■□□□□ 0.96
PNKP-213ENST00000599543 SMAD2Q15796 467 aaKnown RBP21.04■□□□□ 0.96
PNKP-213ENST00000599543 B3GNT9Q6UX72 402 aa21.04■□□□□ 0.96
PNKP-213ENST00000599543 RBM23Q86U06 439 aaKnown RBP21.04■□□□□ 0.96
PNKP-213ENST00000599543 ADHFE1Q8IWW8 467 aa21.04■□□□□ 0.96
PNKP-213ENST00000599543 ABI1Q8IZP0 508 aa21.04■□□□□ 0.96
PNKP-213ENST00000599543 EFHBQ8N7U6 833 aa21.04■□□□□ 0.96
PNKP-213ENST00000599543 TMEM117Q9H0C3 514 aa21.04■□□□□ 0.96
PNKP-213ENST00000599543 HCSTQ9UBK5 93 aa21.04■□□□□ 0.96
PNKP-213ENST00000599543 TMEM150BA6NC51 233 aa21.03■□□□□ 0.96
PNKP-213ENST00000599543 MBTPS2O43462 519 aa21.03■□□□□ 0.96
PNKP-213ENST00000599543 GPR37L1O60883 481 aa21.03■□□□□ 0.96
PNKP-213ENST00000599543 ALADP13716 330 aa21.03■□□□□ 0.96
PNKP-213ENST00000599543 DNM2P50570 870 aa21.03■□□□□ 0.96
PNKP-213ENST00000599543 CDC42EP1Q00587 391 aa21.03■□□□□ 0.96
PNKP-213ENST00000599543 NEK8Q86SG6 692 aa21.03■□□□□ 0.96
PNKP-213ENST00000599543 LRRC43Q8N309 656 aa21.03■□□□□ 0.96
PNKP-213ENST00000599543 RNF169Q8NCN4 708 aa21.03■□□□□ 0.96
PNKP-213ENST00000599543 POP1Q99575 1024 aaKnown RBP21.03■□□□□ 0.96
PNKP-213ENST00000599543 SH2D3AQ9BRG2 576 aa21.03■□□□□ 0.96
PNKP-213ENST00000599543 HCN4Q9Y3Q4 1203 aa21.03■□□□□ 0.96
PNKP-213ENST00000599543 PCDHGC5Q9Y5F6 944 aa21.03■□□□□ 0.96
PNKP-213ENST00000599543 DDX11L8A8MPP1 907 aa21.02■□□□□ 0.96
PNKP-213ENST00000599543 PFKFB2O60825 505 aa21.02■□□□□ 0.96
PNKP-213ENST00000599543 GCFC2P16383 781 aaKnown RBP21.02■□□□□ 0.96
PNKP-213ENST00000599543 FGFR4P22455 802 aa21.02■□□□□ 0.96
PNKP-213ENST00000599543 PSMC5P62195 406 aa21.02■□□□□ 0.96
PNKP-213ENST00000599543 DRP2Q13474 957 aa21.02■□□□□ 0.96
PNKP-213ENST00000599543 ANKRD1Q15327 319 aa21.02■□□□□ 0.96
PNKP-213ENST00000599543 ME3Q16798 604 aa21.02■□□□□ 0.96
PNKP-213ENST00000599543 ECHDC2Q86YB7 292 aa21.02■□□□□ 0.96
PNKP-213ENST00000599543 TBC1D32Q96NH3 1257 aa21.02■□□□□ 0.96
PNKP-213ENST00000599543 GCOM2Q9BZD3 368 aaPredicted RBP21.02■□□□□ 0.96
PNKP-213ENST00000599543 CWH43Q9H720 699 aa21.02■□□□□ 0.96
PNKP-213ENST00000599543 C11orf16Q9NQ32 467 aa21.02■□□□□ 0.96
PNKP-213ENST00000599543 DACT1Q9NYF0 836 aa21.02■□□□□ 0.96
PNKP-213ENST00000599543 CCNT1O60563 726 aaKnown RBP21.01■□□□□ 0.95
PNKP-213ENST00000599543 SFPQP23246 707 aaKnown RBP eCLIP21.01■□□□□ 0.95
PNKP-213ENST00000599543 PPP2R5CQ13362 524 aa21.01■□□□□ 0.95
PNKP-213ENST00000599543 PPP4R3AQ6IN85 833 aa21.01■□□□□ 0.95
PNKP-213ENST00000599543 PIK3AP1Q6ZUJ8 805 aa21.01■□□□□ 0.95
PNKP-213ENST00000599543 WASF1Q92558 559 aa21.01■□□□□ 0.95
PNKP-213ENST00000599543 FAM20AQ96MK3 541 aa21.01■□□□□ 0.95
PNKP-213ENST00000599543 CASD1Q96PB1 797 aa21.01■□□□□ 0.95
PNKP-213ENST00000599543 NAP1L4Q99733 375 aaKnown RBP21.01■□□□□ 0.95
PNKP-213ENST00000599543 TLE6Q9H808 572 aa21.01■□□□□ 0.95
PNKP-213ENST00000599543 KCNMB3Q9NPA1 279 aa21.01■□□□□ 0.95
PNKP-213ENST00000599543 TRIOO75962 3097 aa21.01■□□□□ 0.95
PNKP-213ENST00000599543 IGKV6-21A0A0C4DH24 114 aa21■□□□□ 0.95
PNKP-213ENST00000599543 A0A0U1RQF3 1178 aa21■□□□□ 0.95
PNKP-213ENST00000599543 FSD2A1L4K1 749 aa21■□□□□ 0.95
PNKP-213ENST00000599543 C19orf67A6NJJ6 358 aa21■□□□□ 0.95
PNKP-213ENST00000599543 CSDE1O75534 798 aaKnown RBP21■□□□□ 0.95
PNKP-213ENST00000599543 STBD1O95210 358 aa21■□□□□ 0.95
PNKP-213ENST00000599543 PPM1AP35813 382 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms