RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 TRMT1LQ7Z2T5 733 aaKnown RBP23.92■■□□□ 1.42
PNKP-212ENST00000599454 FBXL16Q8N461 479 aa23.92■■□□□ 1.42
PNKP-212ENST00000599454 PBXIP1Q96AQ6 731 aa23.92■■□□□ 1.42
PNKP-212ENST00000599454 LENG9Q96B70 501 aa23.92■■□□□ 1.42
PNKP-212ENST00000599454 RPGRIP1Q96KN7 1286 aa23.92■■□□□ 1.42
PNKP-212ENST00000599454 ZNF558Q96NG5 402 aa23.92■■□□□ 1.42
PNKP-212ENST00000599454 CASD1Q96PB1 797 aa23.92■■□□□ 1.42
PNKP-212ENST00000599454 TCF25Q9BQ70 676 aa23.92■■□□□ 1.42
PNKP-212ENST00000599454 ENTPD7Q9NQZ7 604 aa23.92■■□□□ 1.42
PNKP-212ENST00000599454 ADAMTS3O15072 1205 aa23.91■■□□□ 1.42
PNKP-212ENST00000599454 KRT17Q04695 432 aa23.91■■□□□ 1.42
PNKP-212ENST00000599454 PLPP4Q5VZY2 271 aa23.91■■□□□ 1.42
PNKP-212ENST00000599454 KCNT2Q6UVM3 1135 aa23.91■■□□□ 1.42
PNKP-212ENST00000599454 ECHDC2Q86YB7 292 aa23.91■■□□□ 1.42
PNKP-212ENST00000599454 BRF1Q92994 677 aa23.91■■□□□ 1.42
PNKP-212ENST00000599454 RIT2Q99578 217 aa23.91■■□□□ 1.42
PNKP-212ENST00000599454 RNF26Q9BY78 433 aaPredicted RBP23.91■■□□□ 1.42
PNKP-212ENST00000599454 DISC1Q9NRI5 854 aa23.91■■□□□ 1.42
PNKP-212ENST00000599454 RNF19AQ9NV58 838 aa23.91■■□□□ 1.42
PNKP-212ENST00000599454 HOXB8P17481 243 aaPredicted RBP23.9■■□□□ 1.42
PNKP-212ENST00000599454 SFNP31947 248 aa23.9■■□□□ 1.42
PNKP-212ENST00000599454 USP11P51784 963 aa23.9■■□□□ 1.42
PNKP-212ENST00000599454 JAK3P52333 1124 aa23.9■■□□□ 1.42
PNKP-212ENST00000599454 RBM10P98175 930 aaKnown RBP23.9■■□□□ 1.42
PNKP-212ENST00000599454 SIGLEC14Q08ET2 396 aa23.9■■□□□ 1.42
PNKP-212ENST00000599454 ANKRD54Q6NXT1 300 aa23.9■■□□□ 1.42
PNKP-212ENST00000599454 BLOC1S2Q6QNY1 142 aa23.9■■□□□ 1.42
PNKP-212ENST00000599454 LRRC55Q6ZSA7 311 aa23.9■■□□□ 1.42
PNKP-212ENST00000599454 SUGP1Q8IWZ8 645 aaKnown RBP23.9■■□□□ 1.42
PNKP-212ENST00000599454 ZNF862O60290 1169 aa23.89■■□□□ 1.41
PNKP-212ENST00000599454 DARSP14868 501 aaKnown RBP23.89■■□□□ 1.41
PNKP-212ENST00000599454 TECP42680 631 aa23.89■■□□□ 1.41
PNKP-212ENST00000599454 GPC3P51654 580 aa23.89■■□□□ 1.41
PNKP-212ENST00000599454 PRKCEQ02156 737 aa23.89■■□□□ 1.41
PNKP-212ENST00000599454 LRRC71Q8N4P6 559 aa23.89■■□□□ 1.41
PNKP-212ENST00000599454 RSPH1Q8WYR4 309 aa23.89■■□□□ 1.41
PNKP-212ENST00000599454 JAKMIP1Q96N16 626 aaKnown RBP23.89■■□□□ 1.41
PNKP-212ENST00000599454 S1PR5Q9H228 398 aa23.89■■□□□ 1.41
PNKP-212ENST00000599454 DACT1Q9NYF0 836 aa23.89■■□□□ 1.41
PNKP-212ENST00000599454 SPG21Q9NZD8 308 aa23.89■■□□□ 1.41
PNKP-212ENST00000599454 CACNA1HO95180 2353 aa23.88■■□□□ 1.41
PNKP-212ENST00000599454 MSH4O15457 936 aa23.88■■□□□ 1.41
PNKP-212ENST00000599454 GAS7O60861 476 aa23.88■■□□□ 1.41
PNKP-212ENST00000599454 EOMESO95936 686 aa23.88■■□□□ 1.41
PNKP-212ENST00000599454 CPA1P15085 419 aa23.88■■□□□ 1.41
PNKP-212ENST00000599454 CDC42EP1Q00587 391 aa23.88■■□□□ 1.41
PNKP-212ENST00000599454 FBXL6Q8N531 539 aa23.88■■□□□ 1.41
PNKP-212ENST00000599454 RDM1Q8NG50 284 aa23.88■■□□□ 1.41
PNKP-212ENST00000599454 PHKBQ93100 1093 aa23.88■■□□□ 1.41
PNKP-212ENST00000599454 CCDC136Q96JN2 1154 aa23.88■■□□□ 1.41
PNKP-212ENST00000599454 SCLT1Q96NL6 688 aa23.88■■□□□ 1.41
PNKP-212ENST00000599454 TEKT3Q9BXF9 490 aa23.88■■□□□ 1.41
PNKP-212ENST00000599454 MRPL9Q9BYD2 267 aaKnown RBP23.88■■□□□ 1.41
PNKP-212ENST00000599454 AGXT2Q9BYV1 514 aa23.88■■□□□ 1.41
PNKP-212ENST00000599454 SH3GLB2Q9NR46 395 aa23.88■■□□□ 1.41
PNKP-212ENST00000599454 A0A0U1RQF3 1178 aa23.87■■□□□ 1.41
PNKP-212ENST00000599454 IFNAR1P17181 557 aa23.87■■□□□ 1.41
PNKP-212ENST00000599454 HSPA4P34932 840 aa23.87■■□□□ 1.41
PNKP-212ENST00000599454 PTPN5P54829 565 aa23.87■■□□□ 1.41
PNKP-212ENST00000599454 TBC1D8BQ0IIM8 1120 aa23.87■■□□□ 1.41
PNKP-212ENST00000599454 NTRK3Q16288 839 aa23.87■■□□□ 1.41
PNKP-212ENST00000599454 TMC7Q7Z402 723 aa23.87■■□□□ 1.41
PNKP-212ENST00000599454 CASP10Q92851 521 aa23.87■■□□□ 1.41
PNKP-212ENST00000599454 SLC5A5Q92911 643 aa23.87■■□□□ 1.41
PNKP-212ENST00000599454 C22orf23Q9BZE7 217 aa23.87■■□□□ 1.41
PNKP-212ENST00000599454 CARNS1A5YM72 827 aa23.86■■□□□ 1.41
PNKP-212ENST00000599454 HIDE1A8MVS5 230 aa23.86■■□□□ 1.41
PNKP-212ENST00000599454 SMC1AQ14683 1233 aaKnown RBP23.86■■□□□ 1.41
PNKP-212ENST00000599454 BMS1Q14692 1282 aaKnown RBP23.86■■□□□ 1.41
PNKP-212ENST00000599454 PTPN21Q16825 1174 aa23.86■■□□□ 1.41
PNKP-212ENST00000599454 LRCH2Q5VUJ6 765 aa23.86■■□□□ 1.41
PNKP-212ENST00000599454 SYCE2Q6PIF2 218 aa23.86■■□□□ 1.41
PNKP-212ENST00000599454 ZNF598Q86UK7 904 aaKnown RBP23.86■■□□□ 1.41
PNKP-212ENST00000599454 NLRP7Q8WX94 980 aa23.86■■□□□ 1.41
PNKP-212ENST00000599454 CHST12Q9NRB3 414 aa23.86■■□□□ 1.41
PNKP-212ENST00000599454 SNX14Q9Y5W7 946 aa23.86■■□□□ 1.41
PNKP-212ENST00000599454 WDFY4Q6ZS81 3184 aa23.85■■□□□ 1.41
PNKP-212ENST00000599454 RPS6KB1P23443 525 aa23.85■■□□□ 1.41
PNKP-212ENST00000599454 TARBP2Q15633 366 aaKnown RBP23.85■■□□□ 1.41
PNKP-212ENST00000599454 TPRNQ4KMQ1 711 aa23.85■■□□□ 1.41
PNKP-212ENST00000599454 CLLU1OSQ5K130 101 aa23.85■■□□□ 1.41
PNKP-212ENST00000599454 SKAP1Q86WV1 359 aa23.85■■□□□ 1.41
PNKP-212ENST00000599454 SLC39A11Q8N1S5 342 aa23.85■■□□□ 1.41
PNKP-212ENST00000599454 RNF169Q8NCN4 708 aa23.85■■□□□ 1.41
PNKP-212ENST00000599454 PRSS33Q8NF86 280 aa23.85■■□□□ 1.41
PNKP-212ENST00000599454 SLC26A6Q9BXS9 759 aa23.85■■□□□ 1.41
PNKP-212ENST00000599454 GCOM2Q9BZD3 368 aaPredicted RBP23.85■■□□□ 1.41
PNKP-212ENST00000599454 VPS54Q9P1Q0 977 aa23.85■■□□□ 1.41
PNKP-212ENST00000599454 NR2E1Q9Y466 385 aa23.85■■□□□ 1.41
PNKP-212ENST00000599454 CHMP2AO43633 222 aa23.84■■□□□ 1.41
PNKP-212ENST00000599454 EDIL3O43854 480 aa23.84■■□□□ 1.41
PNKP-212ENST00000599454 PSMA5P28066 241 aa23.84■■□□□ 1.41
PNKP-212ENST00000599454 EVCP57679 992 aa23.84■■□□□ 1.41
PNKP-212ENST00000599454 UGCGQ16739 394 aa23.84■■□□□ 1.41
PNKP-212ENST00000599454 LLGL2Q6P1M3 1020 aa23.84■■□□□ 1.41
PNKP-212ENST00000599454 MRPL43Q8N983 215 aaKnown RBP23.84■■□□□ 1.41
PNKP-212ENST00000599454 NECTIN4Q96NY8 510 aa23.84■■□□□ 1.41
PNKP-212ENST00000599454 NIFKQ9BYG3 293 aaKnown RBP23.84■■□□□ 1.41
PNKP-212ENST00000599454 UNC45AQ9H3U1 944 aa23.84■■□□□ 1.41
PNKP-212ENST00000599454 PBX3P40426 434 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms