RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 FAM43BQ6ZT52 329 aaPredicted RBP25.28■■□□□ 1.64
CCDC9-204ENST00000599398 TMEM192Q8IY95 271 aa25.28■■□□□ 1.64
CCDC9-204ENST00000599398 ZNF579Q8NAF0 562 aaKnown RBP25.28■■□□□ 1.64
CCDC9-204ENST00000599398 SLC7A3Q8WY07 619 aa25.28■■□□□ 1.64
CCDC9-204ENST00000599398 RGS18Q9NS28 235 aa25.28■■□□□ 1.64
CCDC9-204ENST00000599398 C1orf112Q9NSG2 853 aa25.28■■□□□ 1.64
CCDC9-204ENST00000599398 NOL7Q9UMY1 257 aaKnown RBP25.28■■□□□ 1.64
CCDC9-204ENST00000599398 PCDHB7Q9Y5E2 793 aa25.28■■□□□ 1.64
CCDC9-204ENST00000599398 SLITRK3O94933 977 aa25.27■■□□□ 1.64
CCDC9-204ENST00000599398 CDC42EP1Q00587 391 aa25.27■■□□□ 1.64
CCDC9-204ENST00000599398 XKR9Q5GH70 373 aa25.27■■□□□ 1.64
CCDC9-204ENST00000599398 TTC38Q5R3I4 469 aa25.27■■□□□ 1.64
CCDC9-204ENST00000599398 RHPN2Q8IUC4 686 aa25.27■■□□□ 1.64
CCDC9-204ENST00000599398 ZNF689Q96CS4 500 aaPredicted RBP25.27■■□□□ 1.64
CCDC9-204ENST00000599398 GCOM2Q9BZD3 368 aaPredicted RBP25.27■■□□□ 1.64
CCDC9-204ENST00000599398 RC3H2Q9HBD1 1191 aaKnown RBP25.27■■□□□ 1.64
CCDC9-204ENST00000599398 BMP2KQ9NSY1 1161 aaPredicted RBP25.27■■□□□ 1.64
CCDC9-204ENST00000599398 PPME1Q9Y570 386 aa25.27■■□□□ 1.64
CCDC9-204ENST00000599398 RALGAPA2Q2PPJ7 1873 aa25.27■■□□□ 1.64
CCDC9-204ENST00000599398 REV3LO60673 3130 aa25.26■■□□□ 1.63
CCDC9-204ENST00000599398 POTEMA6NI47 508 aa25.26■■□□□ 1.63
CCDC9-204ENST00000599398 ZBTB39O15060 712 aa25.26■■□□□ 1.63
CCDC9-204ENST00000599398 DARSP14868 501 aaKnown RBP25.26■■□□□ 1.63
CCDC9-204ENST00000599398 CTNNB1P35222 781 aa25.26■■□□□ 1.63
CCDC9-204ENST00000599398 PAN2Q504Q3 1202 aaKnown RBP25.26■■□□□ 1.63
CCDC9-204ENST00000599398 SLC24A5Q71RS6 500 aa25.26■■□□□ 1.63
CCDC9-204ENST00000599398 EXOC8Q8IYI6 725 aa25.26■■□□□ 1.63
CCDC9-204ENST00000599398 NEK9Q8TD19 979 aa25.26■■□□□ 1.63
CCDC9-204ENST00000599398 RNF216Q9NWF9 866 aaPredicted RBP25.26■■□□□ 1.63
CCDC9-204ENST00000599398 ARID2Q68CP9 1835 aa25.26■■□□□ 1.63
CCDC9-204ENST00000599398 A0A087WZ62 844 aa25.25■■□□□ 1.63
CCDC9-204ENST00000599398 CSDE1O75534 798 aaKnown RBP25.25■■□□□ 1.63
CCDC9-204ENST00000599398 OR52Z1P0C646 297 aa25.25■■□□□ 1.63
CCDC9-204ENST00000599398 ZSCAN20P17040 1043 aaPredicted RBP25.25■■□□□ 1.63
CCDC9-204ENST00000599398 FGFR4P22455 802 aa25.25■■□□□ 1.63
CCDC9-204ENST00000599398 RFC5P40937 340 aa25.25■■□□□ 1.63
CCDC9-204ENST00000599398 TRAPPC10P48553 1259 aa25.25■■□□□ 1.63
CCDC9-204ENST00000599398 ORC2Q13416 577 aaPredicted RBP25.25■■□□□ 1.63
CCDC9-204ENST00000599398 CRIPAKQ8N1N5 446 aa25.25■■□□□ 1.63
CCDC9-204ENST00000599398 NLRP4Q96MN2 994 aa25.25■■□□□ 1.63
CCDC9-204ENST00000599398 HSD17B14Q9BPX1 270 aa25.25■■□□□ 1.63
CCDC9-204ENST00000599398 FDXACB1Q9BRP7 624 aaPredicted RBP25.25■■□□□ 1.63
CCDC9-204ENST00000599398 LMCD1Q9NZU5 365 aa25.25■■□□□ 1.63
CCDC9-204ENST00000599398 C9IYK1 514 aa25.24■■□□□ 1.63
CCDC9-204ENST00000599398 U2AF2P26368 475 aaKnown RBP eCLIP25.24■■□□□ 1.63
CCDC9-204ENST00000599398 GJB2P29033 226 aa25.24■■□□□ 1.63
CCDC9-204ENST00000599398 GATMP50440 423 aa25.24■■□□□ 1.63
CCDC9-204ENST00000599398 GPM6BQ13491 265 aa25.24■■□□□ 1.63
CCDC9-204ENST00000599398 MCTP1Q6DN14 999 aa25.24■■□□□ 1.63
CCDC9-204ENST00000599398 KSR1Q8IVT5 923 aa25.24■■□□□ 1.63
CCDC9-204ENST00000599398 CMTR2Q8IYT2 770 aaKnown RBP25.24■■□□□ 1.63
CCDC9-204ENST00000599398 TMEM143Q96AN5 459 aa25.24■■□□□ 1.63
CCDC9-204ENST00000599398 CCDC43Q96MW1 224 aaKnown RBP25.24■■□□□ 1.63
CCDC9-204ENST00000599398 DHX33Q9H6R0 707 aaKnown RBP25.24■■□□□ 1.63
CCDC9-204ENST00000599398 THEGQ9P2T0 379 aa25.24■■□□□ 1.63
CCDC9-204ENST00000599398 RWDD3Q9Y3V2 267 aa25.24■■□□□ 1.63
CCDC9-204ENST00000599398 TECP42680 631 aa25.23■■□□□ 1.63
CCDC9-204ENST00000599398 DSC3Q14574 896 aa25.23■■□□□ 1.63
CCDC9-204ENST00000599398 NBR1Q14596 966 aa25.23■■□□□ 1.63
CCDC9-204ENST00000599398 EMC2Q15006 297 aa25.23■■□□□ 1.63
CCDC9-204ENST00000599398 ZNF410Q86VK4 478 aa25.23■■□□□ 1.63
CCDC9-204ENST00000599398 BACH2Q9BYV9 841 aa25.23■■□□□ 1.63
CCDC9-204ENST00000599398 SMC3Q9UQE7 1217 aa25.23■■□□□ 1.63
CCDC9-204ENST00000599398 H3BNC9 293 aa25.22■■□□□ 1.63
CCDC9-204ENST00000599398 H3BQV1 296 aa25.22■■□□□ 1.63
CCDC9-204ENST00000599398 BMPR1AP36894 532 aa25.22■■□□□ 1.63
CCDC9-204ENST00000599398 PSPC1Q8WXF1 523 aaKnown RBP25.22■■□□□ 1.63
CCDC9-204ENST00000599398 INO80BQ9C086 356 aaPredicted RBP25.22■■□□□ 1.63
CCDC9-204ENST00000599398 ATP6V0A4Q9HBG4 840 aa25.22■■□□□ 1.63
CCDC9-204ENST00000599398 COL4A3BPQ9Y5P4 624 aa25.22■■□□□ 1.63
CCDC9-204ENST00000599398 MRPL42Q9Y6G3 142 aaKnown RBP25.22■■□□□ 1.63
CCDC9-204ENST00000599398 DLL1O00548 723 aa25.21■■□□□ 1.63
CCDC9-204ENST00000599398 LYPLA2O95372 231 aa25.21■■□□□ 1.63
CCDC9-204ENST00000599398 SFPQP23246 707 aaKnown RBP eCLIP25.21■■□□□ 1.63
CCDC9-204ENST00000599398 PTPROQ16827 1216 aa25.21■■□□□ 1.63
CCDC9-204ENST00000599398 TCP11Q8WWU5 503 aa25.21■■□□□ 1.63
CCDC9-204ENST00000599398 PRPF31Q8WWY3 499 aaKnown RBP25.21■■□□□ 1.63
CCDC9-204ENST00000599398 CLP1Q92989 425 aaKnown RBP25.21■■□□□ 1.63
CCDC9-204ENST00000599398 MTRQ99707 1265 aa25.21■■□□□ 1.63
CCDC9-204ENST00000599398 ANKEF1Q9NU02 776 aa25.21■■□□□ 1.63
CCDC9-204ENST00000599398 TMEM161AQ9NX61 479 aa25.21■■□□□ 1.63
CCDC9-204ENST00000599398 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.21■■□□□ 1.63
CCDC9-204ENST00000599398 FNDC1Q4ZHG4 1894 aaPredicted RBP25.2■■□□□ 1.62
CCDC9-204ENST00000599398 TBKBP1A7MCY6 615 aa25.2■■□□□ 1.62
CCDC9-204ENST00000599398 GAS2O43903 313 aaKnown RBP25.2■■□□□ 1.62
CCDC9-204ENST00000599398 RB1P06400 928 aa25.2■■□□□ 1.62
CCDC9-204ENST00000599398 LINC00271P0C7V0 271 aa25.2■■□□□ 1.62
CCDC9-204ENST00000599398 SRGAP2CP0DJJ0 459 aa25.2■■□□□ 1.62
CCDC9-204ENST00000599398 FAM189BP81408 668 aa25.2■■□□□ 1.62
CCDC9-204ENST00000599398 FAM102BQ5T8I3 360 aa25.2■■□□□ 1.62
CCDC9-204ENST00000599398 ERMNQ8TAM6 284 aa25.2■■□□□ 1.62
CCDC9-204ENST00000599398 PIGOQ8TEQ8 1089 aa25.2■■□□□ 1.62
CCDC9-204ENST00000599398 C11orf84Q9BUA3 381 aaPredicted RBP25.2■■□□□ 1.62
CCDC9-204ENST00000599398 KIAA1671Q9BY89 1806 aa25.19■■□□□ 1.62
CCDC9-204ENST00000599398 MYO7AQ13402 2215 aa25.19■■□□□ 1.62
CCDC9-204ENST00000599398 A0A087WWV3 80 aa25.19■■□□□ 1.62
CCDC9-204ENST00000599398 C5orf67F2Z3F1 127 aa25.19■■□□□ 1.62
CCDC9-204ENST00000599398 TOB1P50616 345 aaPredicted RBP25.19■■□□□ 1.62
CCDC9-204ENST00000599398 LAMTOR4Q0VGL1 99 aa25.19■■□□□ 1.62
CCDC9-204ENST00000599398 CATSPER4Q7RTX7 472 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms