RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 PTPRSQ13332 1948 aa25.45■■□□□ 1.67
IRF3-220ENST00000598108 A0A087WZ62 844 aa25.45■■□□□ 1.66
IRF3-220ENST00000598108 EPOPA6NHQ4 379 aa25.45■■□□□ 1.66
IRF3-220ENST00000598108 PDCP20941 246 aa25.45■■□□□ 1.66
IRF3-220ENST00000598108 FGFR4P22455 802 aa25.45■■□□□ 1.66
IRF3-220ENST00000598108 RPA1P27694 616 aa25.45■■□□□ 1.66
IRF3-220ENST00000598108 RARRES1P49788 294 aa25.45■■□□□ 1.66
IRF3-220ENST00000598108 ADGRE1Q14246 886 aa25.45■■□□□ 1.66
IRF3-220ENST00000598108 PDIA5Q14554 519 aa25.45■■□□□ 1.66
IRF3-220ENST00000598108 EMC2Q15006 297 aa25.45■■□□□ 1.66
IRF3-220ENST00000598108 ECM1Q16610 540 aa25.45■■□□□ 1.66
IRF3-220ENST00000598108 PRPF31Q8WWY3 499 aaKnown RBP25.45■■□□□ 1.66
IRF3-220ENST00000598108 SCLT1Q96NL6 688 aa25.45■■□□□ 1.66
IRF3-220ENST00000598108 ADAM2Q99965 735 aa25.45■■□□□ 1.66
IRF3-220ENST00000598108 FDXACB1Q9BRP7 624 aaPredicted RBP25.45■■□□□ 1.66
IRF3-220ENST00000598108 XPNPEP1Q9NQW7 623 aa25.45■■□□□ 1.66
IRF3-220ENST00000598108 LRWD1Q9UFC0 647 aa25.45■■□□□ 1.66
IRF3-220ENST00000598108 LINC01553A4QN01 128 aa25.44■■□□□ 1.66
IRF3-220ENST00000598108 RFXAPO00287 272 aa25.44■■□□□ 1.66
IRF3-220ENST00000598108 LAD1O00515 517 aa25.44■■□□□ 1.66
IRF3-220ENST00000598108 XRCC6P12956 609 aaKnown RBP eCLIP25.44■■□□□ 1.66
IRF3-220ENST00000598108 ATP2C1P98194 919 aaPredicted RBP25.44■■□□□ 1.66
IRF3-220ENST00000598108 DSC3Q14574 896 aa25.44■■□□□ 1.66
IRF3-220ENST00000598108 POTEGQ6S5H5 508 aa25.44■■□□□ 1.66
IRF3-220ENST00000598108 IGSF22Q8N9C0 903 aa25.44■■□□□ 1.66
IRF3-220ENST00000598108 ERMNQ8TAM6 284 aa25.44■■□□□ 1.66
IRF3-220ENST00000598108 SP7Q8TDD2 431 aaPredicted RBP25.44■■□□□ 1.66
IRF3-220ENST00000598108 YME1L1Q96TA2 773 aa25.44■■□□□ 1.66
IRF3-220ENST00000598108 MICAL3Q7RTP6 2002 aa25.44■■□□□ 1.66
IRF3-220ENST00000598108 PP2D1A8MPX8 630 aa25.43■■□□□ 1.66
IRF3-220ENST00000598108 PRPHP41219 470 aa25.43■■□□□ 1.66
IRF3-220ENST00000598108 CDC42EP1Q00587 391 aa25.43■■□□□ 1.66
IRF3-220ENST00000598108 ODR4Q5SWX8 454 aa25.43■■□□□ 1.66
IRF3-220ENST00000598108 EXOC8Q8IYI6 725 aa25.43■■□□□ 1.66
IRF3-220ENST00000598108 ARNTL2Q8WYA1 636 aa25.43■■□□□ 1.66
IRF3-220ENST00000598108 GCOM2Q9BZD3 368 aaPredicted RBP25.43■■□□□ 1.66
IRF3-220ENST00000598108 GBF1Q92538 1859 aa25.43■■□□□ 1.66
IRF3-220ENST00000598108 FOSL2P15408 326 aa25.42■■□□□ 1.66
IRF3-220ENST00000598108 CDC25AP30304 524 aa25.42■■□□□ 1.66
IRF3-220ENST00000598108 DTHD1Q6ZMT9 781 aa25.42■■□□□ 1.66
IRF3-220ENST00000598108 BRAPQ7Z569 592 aa25.42■■□□□ 1.66
IRF3-220ENST00000598108 PSPC1Q8WXF1 523 aaKnown RBP25.42■■□□□ 1.66
IRF3-220ENST00000598108 NLRP4Q96MN2 994 aa25.42■■□□□ 1.66
IRF3-220ENST00000598108 NACC1Q96RE7 527 aa25.42■■□□□ 1.66
IRF3-220ENST00000598108 RGS18Q9NS28 235 aa25.42■■□□□ 1.66
IRF3-220ENST00000598108 COL4A3BPQ9Y5P4 624 aa25.42■■□□□ 1.66
IRF3-220ENST00000598108 SRGAP2CP0DJJ0 459 aa25.41■■□□□ 1.66
IRF3-220ENST00000598108 IBSPP21815 317 aaPredicted RBP25.41■■□□□ 1.66
IRF3-220ENST00000598108 CCT6AP40227 531 aaKnown RBP25.41■■□□□ 1.66
IRF3-220ENST00000598108 LAMTOR4Q0VGL1 99 aa25.41■■□□□ 1.66
IRF3-220ENST00000598108 ZNF410Q86VK4 478 aa25.41■■□□□ 1.66
IRF3-220ENST00000598108 HSCBQ8IWL3 235 aa25.41■■□□□ 1.66
IRF3-220ENST00000598108 MTRQ99707 1265 aa25.41■■□□□ 1.66
IRF3-220ENST00000598108 RC3H2Q9HBD1 1191 aaKnown RBP25.41■■□□□ 1.66
IRF3-220ENST00000598108 IFT122Q9HBG6 1241 aa25.41■■□□□ 1.66
IRF3-220ENST00000598108 MTMR6Q9Y217 621 aa25.41■■□□□ 1.66
IRF3-220ENST00000598108 DENND3A2RUS2 1198 aa25.4■■□□□ 1.66
IRF3-220ENST00000598108 C9IYK1 514 aa25.4■■□□□ 1.66
IRF3-220ENST00000598108 GAS2O43903 313 aaKnown RBP25.4■■□□□ 1.66
IRF3-220ENST00000598108 DGAT1O75907 488 aa25.4■■□□□ 1.66
IRF3-220ENST00000598108 DGKIO75912 1065 aa25.4■■□□□ 1.66
IRF3-220ENST00000598108 ERVK-21P61565 698 aa25.4■■□□□ 1.66
IRF3-220ENST00000598108 RESTQ13127 1097 aa25.4■■□□□ 1.66
IRF3-220ENST00000598108 HAUS3Q68CZ6 603 aa25.4■■□□□ 1.66
IRF3-220ENST00000598108 NPAS4Q8IUM7 802 aa25.4■■□□□ 1.66
IRF3-220ENST00000598108 TCP11Q8WWU5 503 aa25.4■■□□□ 1.66
IRF3-220ENST00000598108 ZNF689Q96CS4 500 aaPredicted RBP25.4■■□□□ 1.66
IRF3-220ENST00000598108 MMTAG2Q9BU76 263 aaKnown RBP25.4■■□□□ 1.66
IRF3-220ENST00000598108 ATP6V0A4Q9HBG4 840 aa25.4■■□□□ 1.66
IRF3-220ENST00000598108 DBR1Q9UK59 544 aaKnown RBP25.4■■□□□ 1.66
IRF3-220ENST00000598108 MTUS1Q9ULD2 1270 aa25.4■■□□□ 1.66
IRF3-220ENST00000598108 ARL2P36404 184 aa25.39■■□□□ 1.66
IRF3-220ENST00000598108 SARSP49591 514 aaKnown RBP25.39■■□□□ 1.66
IRF3-220ENST00000598108 FAM189BP81408 668 aa25.39■■□□□ 1.66
IRF3-220ENST00000598108 FAM173BQ6P4H8 233 aa25.39■■□□□ 1.66
IRF3-220ENST00000598108 FAM43BQ6ZT52 329 aaPredicted RBP25.39■■□□□ 1.66
IRF3-220ENST00000598108 SLC24A5Q71RS6 500 aa25.39■■□□□ 1.66
IRF3-220ENST00000598108 ASAP3Q8TDY4 903 aa25.39■■□□□ 1.66
IRF3-220ENST00000598108 SNX29Q8TEQ0 813 aa25.39■■□□□ 1.66
IRF3-220ENST00000598108 CCDC43Q96MW1 224 aaKnown RBP25.39■■□□□ 1.66
IRF3-220ENST00000598108 TGS1Q96RS0 853 aaKnown RBP25.39■■□□□ 1.66
IRF3-220ENST00000598108 C17orf80Q9BSJ5 609 aa25.39■■□□□ 1.66
IRF3-220ENST00000598108 RAB34Q9BZG1 259 aa25.39■■□□□ 1.66
IRF3-220ENST00000598108 C1orf112Q9NSG2 853 aa25.39■■□□□ 1.66
IRF3-220ENST00000598108 KIAA1024Q9UPX6 916 aa25.39■■□□□ 1.66
IRF3-220ENST00000598108 USO1O60763 962 aaKnown RBP25.38■■□□□ 1.65
IRF3-220ENST00000598108 MUTP22033 750 aa25.38■■□□□ 1.65
IRF3-220ENST00000598108 GATMP50440 423 aa25.38■■□□□ 1.65
IRF3-220ENST00000598108 GAS2L1Q99501 681 aaPredicted RBP25.38■■□□□ 1.65
IRF3-220ENST00000598108 MINDY3Q9H8M7 445 aa25.38■■□□□ 1.65
IRF3-220ENST00000598108 MYO9BQ13459 2157 aa25.38■■□□□ 1.65
IRF3-220ENST00000598108 TTC3P53804 2025 aa25.37■■□□□ 1.65
IRF3-220ENST00000598108 EYSQ5T1H1 3165 aa25.37■■□□□ 1.65
IRF3-220ENST00000598108 VWA3AA6NCI4 1184 aa25.37■■□□□ 1.65
IRF3-220ENST00000598108 ASAP2O43150 1006 aa25.37■■□□□ 1.65
IRF3-220ENST00000598108 IGFBP4P22692 258 aa25.37■■□□□ 1.65
IRF3-220ENST00000598108 SF3A1Q15459 793 aaKnown RBP25.37■■□□□ 1.65
IRF3-220ENST00000598108 ARL6IP4Q66PJ3 421 aaKnown RBP25.37■■□□□ 1.65
IRF3-220ENST00000598108 MAEAQ7L5Y9 396 aa25.37■■□□□ 1.65
IRF3-220ENST00000598108 RNF149Q8NC42 400 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms