RNA–Protein interactions for RNA: ENST00000597180.1

IRF3-216, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-216ENST00000597180 EIF4BP23588 611 aaKnown RBP20.16■□□□□ 0.82
IRF3-216ENST00000597180 DEFB103AP81534 67 aa20.16■□□□□ 0.82
IRF3-216ENST00000597180 GRIN1Q05586 938 aa20.16■□□□□ 0.82
IRF3-216ENST00000597180 SLC39A14Q15043 492 aa20.16■□□□□ 0.82
IRF3-216ENST00000597180 ODR4Q5SWX8 454 aa20.16■□□□□ 0.82
IRF3-216ENST00000597180 FOXD4L5Q5VV16 416 aaPredicted RBP20.16■□□□□ 0.82
IRF3-216ENST00000597180 RHPN2Q8IUC4 686 aa20.16■□□□□ 0.82
IRF3-216ENST00000597180 PSPC1Q8WXF1 523 aaKnown RBP20.16■□□□□ 0.82
IRF3-216ENST00000597180 FOXD4L4Q8WXT5 416 aaPredicted RBP20.16■□□□□ 0.82
IRF3-216ENST00000597180 TMEM143Q96AN5 459 aa20.16■□□□□ 0.82
IRF3-216ENST00000597180 FTHL17Q9BXU8 183 aa20.16■□□□□ 0.82
IRF3-216ENST00000597180 BMP2KQ9NSY1 1161 aaPredicted RBP20.16■□□□□ 0.82
IRF3-216ENST00000597180 FBXO2Q9UK22 296 aaPredicted RBP20.16■□□□□ 0.82
IRF3-216ENST00000597180 COL4A3BPQ9Y5P4 624 aa20.16■□□□□ 0.82
IRF3-216ENST00000597180 MYH11P35749 1972 aa20.15■□□□□ 0.82
IRF3-216ENST00000597180 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.15■□□□□ 0.82
IRF3-216ENST00000597180 BRD1O95696 1058 aa20.15■□□□□ 0.82
IRF3-216ENST00000597180 DARSP14868 501 aaKnown RBP20.15■□□□□ 0.82
IRF3-216ENST00000597180 CEBPZQ03701 1054 aaKnown RBP20.15■□□□□ 0.82
IRF3-216ENST00000597180 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.15■□□□□ 0.82
IRF3-216ENST00000597180 FAM228AQ86W67 206 aa20.15■□□□□ 0.82
IRF3-216ENST00000597180 HERC6Q8IVU3 1022 aa20.15■□□□□ 0.82
IRF3-216ENST00000597180 PRPF31Q8WWY3 499 aaKnown RBP20.15■□□□□ 0.82
IRF3-216ENST00000597180 NLRP7Q8WX94 980 aa20.15■□□□□ 0.82
IRF3-216ENST00000597180 PNMA5Q96PV4 448 aa20.15■□□□□ 0.82
IRF3-216ENST00000597180 PBX4Q9BYU1 374 aa20.15■□□□□ 0.82
IRF3-216ENST00000597180 NT5C3AQ9H0P0 336 aa20.15■□□□□ 0.82
IRF3-216ENST00000597180 TMX1Q9H3N1 280 aa20.15■□□□□ 0.82
IRF3-216ENST00000597180 ST3GAL5Q9UNP4 418 aa20.15■□□□□ 0.82
IRF3-216ENST00000597180 SRPRBQ9Y5M8 271 aaKnown RBP20.15■□□□□ 0.82
IRF3-216ENST00000597180 ARHGEF35A5YM69 484 aa20.14■□□□□ 0.81
IRF3-216ENST00000597180 GPR182O15218 404 aa20.14■□□□□ 0.81
IRF3-216ENST00000597180 ASAP2O43150 1006 aa20.14■□□□□ 0.81
IRF3-216ENST00000597180 USO1O60763 962 aaKnown RBP20.14■□□□□ 0.81
IRF3-216ENST00000597180 EYA4O95677 639 aa20.14■□□□□ 0.81
IRF3-216ENST00000597180 AMHP03971 560 aa20.14■□□□□ 0.81
IRF3-216ENST00000597180 MARCKSP29966 332 aaPredicted RBP20.14■□□□□ 0.81
IRF3-216ENST00000597180 ARL2P36404 184 aa20.14■□□□□ 0.81
IRF3-216ENST00000597180 GRB10Q13322 594 aa20.14■□□□□ 0.81
IRF3-216ENST00000597180 RAB30Q15771 203 aa20.14■□□□□ 0.81
IRF3-216ENST00000597180 TMEM119Q4V9L6 283 aa20.14■□□□□ 0.81
IRF3-216ENST00000597180 PADI6Q6TGC4 694 aa20.14■□□□□ 0.81
IRF3-216ENST00000597180 CABP7Q86V35 215 aa20.14■□□□□ 0.81
IRF3-216ENST00000597180 KSR1Q8IVT5 923 aa20.14■□□□□ 0.81
IRF3-216ENST00000597180 LINC00301Q8NCQ3 95 aa20.14■□□□□ 0.81
IRF3-216ENST00000597180 MCPH1Q8NEM0 835 aa20.14■□□□□ 0.81
IRF3-216ENST00000597180 LINC01599Q8WXQ3 324 aa20.14■□□□□ 0.81
IRF3-216ENST00000597180 ZNF668Q96K58 619 aaPredicted RBP20.14■□□□□ 0.81
IRF3-216ENST00000597180 SCLT1Q96NL6 688 aa20.14■□□□□ 0.81
IRF3-216ENST00000597180 GCOM2Q9BZD3 368 aaPredicted RBP20.14■□□□□ 0.81
IRF3-216ENST00000597180 BHMT2Q9H2M3 363 aa20.14■□□□□ 0.81
IRF3-216ENST00000597180 DNM3Q9UQ16 869 aa20.14■□□□□ 0.81
IRF3-216ENST00000597180 ZDHHC9Q9Y397 364 aa20.14■□□□□ 0.81
IRF3-216ENST00000597180 PCDHA11Q9Y5I1 949 aa20.14■□□□□ 0.81
IRF3-216ENST00000597180 A0A087WZ62 844 aa20.13■□□□□ 0.81
IRF3-216ENST00000597180 E9PMD0 336 aa20.13■□□□□ 0.81
IRF3-216ENST00000597180 ENPP3O14638 875 aa20.13■□□□□ 0.81
IRF3-216ENST00000597180 CYP11B2P19099 503 aa20.13■□□□□ 0.81
IRF3-216ENST00000597180 PBX2P40425 430 aa20.13■□□□□ 0.81
IRF3-216ENST00000597180 UBA7P41226 1012 aa20.13■□□□□ 0.81
IRF3-216ENST00000597180 LAMTOR4Q0VGL1 99 aa20.13■□□□□ 0.81
IRF3-216ENST00000597180 NFX1Q12986 1120 aaKnown RBP20.13■□□□□ 0.81
IRF3-216ENST00000597180 MXD4Q14582 209 aaPredicted RBP20.13■□□□□ 0.81
IRF3-216ENST00000597180 ATL3Q6DD88 541 aa20.13■□□□□ 0.81
IRF3-216ENST00000597180 KCNK18Q7Z418 384 aa20.13■□□□□ 0.81
IRF3-216ENST00000597180 NLRP4Q96MN2 994 aa20.13■□□□□ 0.81
IRF3-216ENST00000597180 FDXACB1Q9BRP7 624 aaPredicted RBP20.13■□□□□ 0.81
IRF3-216ENST00000597180 CCSER1Q9C0I3 900 aa20.13■□□□□ 0.81
IRF3-216ENST00000597180 CSRNP2Q9H175 543 aa20.13■□□□□ 0.81
IRF3-216ENST00000597180 TSPYL2Q9H2G4 693 aaPredicted RBP20.13■□□□□ 0.81
IRF3-216ENST00000597180 IFT122Q9HBG6 1241 aa20.13■□□□□ 0.81
IRF3-216ENST00000597180 TMEM265A0A087WTH1 108 aa20.12■□□□□ 0.81
IRF3-216ENST00000597180 GJB5O95377 273 aa20.12■□□□□ 0.81
IRF3-216ENST00000597180 YEATS4O95619 227 aa20.12■□□□□ 0.81
IRF3-216ENST00000597180 DNAJB2P25686 324 aa20.12■□□□□ 0.81
IRF3-216ENST00000597180 RABGGTBP53611 331 aa20.12■□□□□ 0.81
IRF3-216ENST00000597180 STK38Q15208 465 aa20.12■□□□□ 0.81
IRF3-216ENST00000597180 RTN4RL1Q86UN2 441 aaPredicted RBP20.12■□□□□ 0.81
IRF3-216ENST00000597180 TOP1MTQ969P6 601 aa20.12■□□□□ 0.81
IRF3-216ENST00000597180 CDK5RAP3Q96JB5 506 aa20.12■□□□□ 0.81
IRF3-216ENST00000597180 INO80BQ9C086 356 aaPredicted RBP20.12■□□□□ 0.81
IRF3-216ENST00000597180 TFIP11Q9UBB9 837 aaKnown RBP20.12■□□□□ 0.81
IRF3-216ENST00000597180 MSRAQ9UJ68 235 aa20.12■□□□□ 0.81
IRF3-216ENST00000597180 COL4A6Q14031 1691 aa20.11■□□□□ 0.81
IRF3-216ENST00000597180 PPP6R2O75170 966 aa20.11■□□□□ 0.81
IRF3-216ENST00000597180 GLRA2P23416 452 aa20.11■□□□□ 0.81
IRF3-216ENST00000597180 POU5F1BQ06416 359 aa20.11■□□□□ 0.81
IRF3-216ENST00000597180 DSC3Q14574 896 aa20.11■□□□□ 0.81
IRF3-216ENST00000597180 ZRSR1Q15695 479 aaKnown RBP20.11■□□□□ 0.81
IRF3-216ENST00000597180 SRGAP1Q7Z6B7 1085 aa20.11■□□□□ 0.81
IRF3-216ENST00000597180 TMCO2Q7Z6W1 182 aaPredicted RBP20.11■□□□□ 0.81
IRF3-216ENST00000597180 MYOCDQ8IZQ8 938 aa20.11■□□□□ 0.81
IRF3-216ENST00000597180 KRI1Q8N9T8 703 aaKnown RBP20.11■□□□□ 0.81
IRF3-216ENST00000597180 ASAP3Q8TDY4 903 aa20.11■□□□□ 0.81
IRF3-216ENST00000597180 CALML4Q96GE6 196 aa20.11■□□□□ 0.81
IRF3-216ENST00000597180 CLIC6Q96NY7 704 aa20.11■□□□□ 0.81
IRF3-216ENST00000597180 POLR3FQ9H1D9 316 aaPredicted RBP20.11■□□□□ 0.81
IRF3-216ENST00000597180 YBX2Q9Y2T7 364 aaKnown RBP20.11■□□□□ 0.81
IRF3-216ENST00000597180 SPTLC2O15270 562 aa20.1■□□□□ 0.81
IRF3-216ENST00000597180 MGEA5O60502 916 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms