RNA–Protein interactions for RNA: ENST00000597047.1

ZNF548-206, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-206ENST00000597047 KIAA0319LQ8IZA0 1049 aa10.32□□□□□ -0.76
ZNF548-206ENST00000597047 TCP11Q8WWU5 503 aa10.32□□□□□ -0.76
ZNF548-206ENST00000597047 PRPF31Q8WWY3 499 aaKnown RBP10.32□□□□□ -0.76
ZNF548-206ENST00000597047 TOX2Q96NM4 488 aa10.32□□□□□ -0.76
ZNF548-206ENST00000597047 OSMRQ99650 979 aa10.32□□□□□ -0.76
ZNF548-206ENST00000597047 CDHR5Q9HBB8 845 aa10.32□□□□□ -0.76
ZNF548-206ENST00000597047 PDLIM7Q9NR12 457 aa10.32□□□□□ -0.76
ZNF548-206ENST00000597047 TBC1D7Q9P0N9 293 aa10.32□□□□□ -0.76
ZNF548-206ENST00000597047 STK17AQ9UEE5 414 aa10.32□□□□□ -0.76
ZNF548-206ENST00000597047 NR2E3Q9Y5X4 410 aa10.32□□□□□ -0.76
ZNF548-206ENST00000597047 CDY2AQ9Y6F7 541 aa10.32□□□□□ -0.76
ZNF548-206ENST00000597047 ALPK3Q96L96 1907 aa10.32□□□□□ -0.76
ZNF548-206ENST00000597047 TNRC18O15417 2968 aaPredicted RBP10.31□□□□□ -0.76
ZNF548-206ENST00000597047 A0A087WZ62 844 aa10.31□□□□□ -0.76
ZNF548-206ENST00000597047 MBLAC1A4D2B0 266 aaPredicted RBP10.31□□□□□ -0.76
ZNF548-206ENST00000597047 MYMKA6NI61 221 aa10.31□□□□□ -0.76
ZNF548-206ENST00000597047 LRRIQ4A6NIV6 560 aa10.31□□□□□ -0.76
ZNF548-206ENST00000597047 RSPH10B2B2RC85 870 aa10.31□□□□□ -0.76
ZNF548-206ENST00000597047 NR1I2O75469 434 aa10.31□□□□□ -0.76
ZNF548-206ENST00000597047 RSPH10BP0C881 870 aa10.31□□□□□ -0.76
ZNF548-206ENST00000597047 FGFR4P22455 802 aa10.31□□□□□ -0.76
ZNF548-206ENST00000597047 UBE2HP62256 183 aa10.31□□□□□ -0.76
ZNF548-206ENST00000597047 ASIC1P78348 528 aa10.31□□□□□ -0.76
ZNF548-206ENST00000597047 ADAM17P78536 824 aa10.31□□□□□ -0.76
ZNF548-206ENST00000597047 MRPS6P82932 125 aaKnown RBP10.31□□□□□ -0.76
ZNF548-206ENST00000597047 AMPD3Q01432 767 aa10.31□□□□□ -0.76
ZNF548-206ENST00000597047 LAMTOR4Q0VGL1 99 aa10.31□□□□□ -0.76
ZNF548-206ENST00000597047 MKRN4PQ13434 485 aaPredicted RBP10.31□□□□□ -0.76
ZNF548-206ENST00000597047 TMEM132AQ24JP5 1023 aa10.31□□□□□ -0.76
ZNF548-206ENST00000597047 NAALADL2Q58DX5 795 aa10.31□□□□□ -0.76
ZNF548-206ENST00000597047 ARSHQ5FYA8 562 aa10.31□□□□□ -0.76
ZNF548-206ENST00000597047 C1orf53Q5VUE5 145 aa10.31□□□□□ -0.76
ZNF548-206ENST00000597047 MYCT1Q8N699 235 aa10.31□□□□□ -0.76
ZNF548-206ENST00000597047 MCPH1Q8NEM0 835 aa10.31□□□□□ -0.76
ZNF548-206ENST00000597047 ASAP3Q8TDY4 903 aa10.31□□□□□ -0.76
ZNF548-206ENST00000597047 PSPC1Q8WXF1 523 aaKnown RBP10.31□□□□□ -0.76
ZNF548-206ENST00000597047 BADQ92934 168 aa10.31□□□□□ -0.76
ZNF548-206ENST00000597047 IFT74Q96LB3 600 aa10.31□□□□□ -0.76
ZNF548-206ENST00000597047 CEP89Q96ST8 783 aa10.31□□□□□ -0.76
ZNF548-206ENST00000597047 LBHD1Q9BQE6 289 aaPredicted RBP10.31□□□□□ -0.76
ZNF548-206ENST00000597047 FDXACB1Q9BRP7 624 aaPredicted RBP10.31□□□□□ -0.76
ZNF548-206ENST00000597047 PYM1Q9BRP8 204 aaKnown RBP10.31□□□□□ -0.76
ZNF548-206ENST00000597047 NOC4LQ9BVI4 516 aaKnown RBP10.31□□□□□ -0.76
ZNF548-206ENST00000597047 DHX33Q9H6R0 707 aaKnown RBP10.31□□□□□ -0.76
ZNF548-206ENST00000597047 XPNPEP1Q9NQW7 623 aa10.31□□□□□ -0.76
ZNF548-206ENST00000597047 LMBRD1Q9NUN5 540 aa10.31□□□□□ -0.76
ZNF548-206ENST00000597047 COL4A3BPQ9Y5P4 624 aa10.31□□□□□ -0.76
ZNF548-206ENST00000597047 TRPV2Q9Y5S1 764 aa10.31□□□□□ -0.76
ZNF548-206ENST00000597047 LOXHD1Q8IVV2 1947 aa10.31□□□□□ -0.76
ZNF548-206ENST00000597047 MYH11P35749 1972 aa10.3□□□□□ -0.76
ZNF548-206ENST00000597047 KINO60870 393 aaKnown RBP10.3□□□□□ -0.76
ZNF548-206ENST00000597047 TIMP1P01033 207 aa10.3□□□□□ -0.76
ZNF548-206ENST00000597047 ACRP10323 421 aa10.3□□□□□ -0.76
ZNF548-206ENST00000597047 GHRP10912 638 aa10.3□□□□□ -0.76
ZNF548-206ENST00000597047 SELPP16109 830 aa10.3□□□□□ -0.76
ZNF548-206ENST00000597047 MCM4P33991 863 aa10.3□□□□□ -0.76
ZNF548-206ENST00000597047 PEX3P56589 373 aa10.3□□□□□ -0.76
ZNF548-206ENST00000597047 FAM160A1Q05DH4 1040 aa10.3□□□□□ -0.76
ZNF548-206ENST00000597047 NFX1Q12986 1120 aaKnown RBP10.3□□□□□ -0.76
ZNF548-206ENST00000597047 E2F4Q16254 413 aa10.3□□□□□ -0.76
ZNF548-206ENST00000597047 CAMK4Q16566 473 aa10.3□□□□□ -0.76
ZNF548-206ENST00000597047 KRBA2Q6ZNG9 492 aa10.3□□□□□ -0.76
ZNF548-206ENST00000597047 C1orf186Q6ZWK4 172 aa10.3□□□□□ -0.76
ZNF548-206ENST00000597047 LRRC8DQ7L1W4 858 aa10.3□□□□□ -0.76
ZNF548-206ENST00000597047 NME8Q8N427 588 aa10.3□□□□□ -0.76
ZNF548-206ENST00000597047 RNF149Q8NC42 400 aa10.3□□□□□ -0.76
ZNF548-206ENST00000597047 DEPTORQ8TB45 409 aa10.3□□□□□ -0.76
ZNF548-206ENST00000597047 CAGE1Q8TC20 777 aa10.3□□□□□ -0.76
ZNF548-206ENST00000597047 DDX12PQ92771 950 aa10.3□□□□□ -0.76
ZNF548-206ENST00000597047 ERCC4Q92889 916 aaPredicted RBP10.3□□□□□ -0.76
ZNF548-206ENST00000597047 PAGE5Q96GU1 130 aa10.3□□□□□ -0.76
ZNF548-206ENST00000597047 CTAGE1Q96RT6 745 aa10.3□□□□□ -0.76
ZNF548-206ENST00000597047 REEP2Q9BRK0 252 aa10.3□□□□□ -0.76
ZNF548-206ENST00000597047 KIFC3Q9BVG8 833 aa10.3□□□□□ -0.76
ZNF548-206ENST00000597047 CELF4Q9BZC1 486 aaKnown RBP10.3□□□□□ -0.76
ZNF548-206ENST00000597047 LRRC27Q9C0I9 530 aa10.3□□□□□ -0.76
ZNF548-206ENST00000597047 PANK4Q9NVE7 773 aa10.3□□□□□ -0.76
ZNF548-206ENST00000597047 DACT1Q9NYF0 836 aa10.3□□□□□ -0.76
ZNF548-206ENST00000597047 HPSEQ9Y251 543 aa10.3□□□□□ -0.76
ZNF548-206ENST00000597047 PPME1Q9Y570 386 aa10.3□□□□□ -0.76
ZNF548-206ENST00000597047 IGKV6-21A0A0C4DH24 114 aa10.29□□□□□ -0.76
ZNF548-206ENST00000597047 INO80B-WBP1J3KQ70 363 aa10.29□□□□□ -0.76
ZNF548-206ENST00000597047 SLC16A4O15374 487 aa10.29□□□□□ -0.76
ZNF548-206ENST00000597047 ACTN4O43707 911 aaKnown RBP10.29□□□□□ -0.76
ZNF548-206ENST00000597047 CHRNA1P02708 482 aa10.29□□□□□ -0.76
ZNF548-206ENST00000597047 IQCF3P0C7M6 154 aa10.29□□□□□ -0.76
ZNF548-206ENST00000597047 SLFN14P0C7P3 912 aa10.29□□□□□ -0.76
ZNF548-206ENST00000597047 PRR29P0C7W0 189 aa10.29□□□□□ -0.76
ZNF548-206ENST00000597047 GLRA2P23416 452 aa10.29□□□□□ -0.76
ZNF548-206ENST00000597047 ITGB8P26012 769 aa10.29□□□□□ -0.76
ZNF548-206ENST00000597047 HOXC8P31273 242 aa10.29□□□□□ -0.76
ZNF548-206ENST00000597047 ARL2P36404 184 aa10.29□□□□□ -0.76
ZNF548-206ENST00000597047 GPC3P51654 580 aa10.29□□□□□ -0.76
ZNF548-206ENST00000597047 PNOCQ13519 176 aa10.29□□□□□ -0.76
ZNF548-206ENST00000597047 CUL4BQ13620 913 aa10.29□□□□□ -0.76
ZNF548-206ENST00000597047 GIT2Q14161 759 aa10.29□□□□□ -0.76
ZNF548-206ENST00000597047 TFDP1Q14186 410 aa10.29□□□□□ -0.76
ZNF548-206ENST00000597047 TRIM71Q2Q1W2 868 aaKnown RBP10.29□□□□□ -0.76
ZNF548-206ENST00000597047 HERC4Q5GLZ8 1057 aaPredicted RBP10.29□□□□□ -0.76
ZNF548-206ENST00000597047 ODR4Q5SWX8 454 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms