RNA–Protein interactions for RNA: ENST00000596398.5

LINC00343-204, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 809 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-204ENST00000596398 SALL4Q9UJQ4 1053 aa9.05□□□□□ -0.96
LINC00343-204ENST00000596398 USP24Q9UPU5 2620 aa9.05□□□□□ -0.96
LINC00343-204ENST00000596398 MAP1BP46821 2468 aaKnown RBP9.05□□□□□ -0.96
LINC00343-204ENST00000596398 SART1O43290 800 aaKnown RBP9.04□□□□□ -0.96
LINC00343-204ENST00000596398 PDGFBP01127 241 aaPredicted RBP9.04□□□□□ -0.96
LINC00343-204ENST00000596398 RPLP1P05386 114 aaKnown RBP9.04□□□□□ -0.96
LINC00343-204ENST00000596398 ACPPP15309 386 aa9.04□□□□□ -0.96
LINC00343-204ENST00000596398 SPINK2P20155 84 aa9.04□□□□□ -0.96
LINC00343-204ENST00000596398 PURAQ00577 322 aaKnown RBP9.04□□□□□ -0.96
LINC00343-204ENST00000596398 PTPROQ16827 1216 aa9.04□□□□□ -0.96
LINC00343-204ENST00000596398 EPC2Q52LR7 807 aa9.04□□□□□ -0.96
LINC00343-204ENST00000596398 ANKRD34AQ69YU3 496 aa9.04□□□□□ -0.96
LINC00343-204ENST00000596398 TAPT1Q6NXT6 567 aa9.04□□□□□ -0.96
LINC00343-204ENST00000596398 FRMD5Q7Z6J6 570 aa9.04□□□□□ -0.96
LINC00343-204ENST00000596398 FBXO16Q8IX29 292 aaPredicted RBP9.04□□□□□ -0.96
LINC00343-204ENST00000596398 ASIC4Q96FT7 647 aa9.04□□□□□ -0.96
LINC00343-204ENST00000596398 MEIS3Q99687 375 aa9.04□□□□□ -0.96
LINC00343-204ENST00000596398 ZMYND15Q9H091 742 aa9.04□□□□□ -0.96
LINC00343-204ENST00000596398 IRF2BPLQ9H1B7 796 aa9.04□□□□□ -0.96
LINC00343-204ENST00000596398 NSUN3Q9H649 340 aaKnown RBP9.04□□□□□ -0.96
LINC00343-204ENST00000596398 OSGEPQ9NPF4 335 aa9.04□□□□□ -0.96
LINC00343-204ENST00000596398 CTNNA3Q9UI47 895 aa9.04□□□□□ -0.96
LINC00343-204ENST00000596398 CEP250Q9BV73 2442 aa9.03□□□□□ -0.96
LINC00343-204ENST00000596398 SCN10AQ9Y5Y9 1956 aa9.03□□□□□ -0.96
LINC00343-204ENST00000596398 NLRC5Q86WI3 1866 aa9.03□□□□□ -0.96
LINC00343-204ENST00000596398 PRR19A6NJB7 356 aa9.03□□□□□ -0.96
LINC00343-204ENST00000596398 E9PSI1 815 aa9.03□□□□□ -0.96
LINC00343-204ENST00000596398 LINC01565O15544 149 aa9.03□□□□□ -0.96
LINC00343-204ENST00000596398 NBNO60934 754 aa9.03□□□□□ -0.96
LINC00343-204ENST00000596398 BMP3P12645 472 aa9.03□□□□□ -0.96
LINC00343-204ENST00000596398 CES1P23141 567 aa9.03□□□□□ -0.96
LINC00343-204ENST00000596398 GTF2F1P35269 517 aaKnown RBP eCLIP9.03□□□□□ -0.96
LINC00343-204ENST00000596398 NBL1P41271 181 aa9.03□□□□□ -0.96
LINC00343-204ENST00000596398 PREPP48147 710 aa9.03□□□□□ -0.96
LINC00343-204ENST00000596398 NLRP12P59046 1061 aa9.03□□□□□ -0.96
LINC00343-204ENST00000596398 CHMP4BP1P59074 171 aa9.03□□□□□ -0.96
LINC00343-204ENST00000596398 GPM6BQ13491 265 aa9.03□□□□□ -0.96
LINC00343-204ENST00000596398 BFSP2Q13515 415 aa9.03□□□□□ -0.96
LINC00343-204ENST00000596398 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.03□□□□□ -0.96
LINC00343-204ENST00000596398 FAM133AQ8N9E0 248 aa9.03□□□□□ -0.96
LINC00343-204ENST00000596398 C1orf127Q8N9H9 656 aa9.03□□□□□ -0.96
LINC00343-204ENST00000596398 SDR42E1Q8WUS8 393 aa9.03□□□□□ -0.96
LINC00343-204ENST00000596398 EDEM1Q92611 657 aa9.03□□□□□ -0.96
LINC00343-204ENST00000596398 RMDN1Q96DB5 314 aa9.03□□□□□ -0.96
LINC00343-204ENST00000596398 FAM83CQ9BQN1 747 aa9.03□□□□□ -0.96
LINC00343-204ENST00000596398 RIOK1Q9BRS2 568 aaKnown RBP9.03□□□□□ -0.96
LINC00343-204ENST00000596398 DZANK1Q9NVP4 752 aa9.03□□□□□ -0.96
LINC00343-204ENST00000596398 SPTBN2O15020 2390 aa9.03□□□□□ -0.96
LINC00343-204ENST00000596398 SETXQ7Z333 2677 aaKnown RBP9.02□□□□□ -0.97
LINC00343-204ENST00000596398 CYP2D7A0A087X1C5 515 aa9.02□□□□□ -0.97
LINC00343-204ENST00000596398 H3BNC9 293 aa9.02□□□□□ -0.97
LINC00343-204ENST00000596398 TBX10O75333 385 aa9.02□□□□□ -0.97
LINC00343-204ENST00000596398 CSPG5O95196 566 aa9.02□□□□□ -0.97
LINC00343-204ENST00000596398 SIGLEC14Q08ET2 396 aa9.02□□□□□ -0.97
LINC00343-204ENST00000596398 HYAL1Q12794 435 aa9.02□□□□□ -0.97
LINC00343-204ENST00000596398 SMAD4Q13485 552 aaKnown RBP9.02□□□□□ -0.97
LINC00343-204ENST00000596398 CCDC158Q5M9N0 1113 aa9.02□□□□□ -0.97
LINC00343-204ENST00000596398 IQSEC1Q6DN90 963 aa9.02□□□□□ -0.97
LINC00343-204ENST00000596398 CNKSR3Q6P9H4 555 aa9.02□□□□□ -0.97
LINC00343-204ENST00000596398 XKR5Q6UX68 686 aa9.02□□□□□ -0.97
LINC00343-204ENST00000596398 BEND4Q6ZU67 534 aa9.02□□□□□ -0.97
LINC00343-204ENST00000596398 DGLUCYQ7Z3D6 616 aa9.02□□□□□ -0.97
LINC00343-204ENST00000596398 CTAGE1Q96RT6 745 aa9.02□□□□□ -0.97
LINC00343-204ENST00000596398 MTG1Q9BT17 334 aaPredicted RBP9.02□□□□□ -0.97
LINC00343-204ENST00000596398 KCNF1Q9H3M0 494 aa9.02□□□□□ -0.97
LINC00343-204ENST00000596398 ANTXR1Q9H6X2 564 aa9.02□□□□□ -0.97
LINC00343-204ENST00000596398 Q9Y3F1 56 aa9.02□□□□□ -0.97
LINC00343-204ENST00000596398 INSL6Q9Y581 213 aa9.02□□□□□ -0.97
LINC00343-204ENST00000596398 ASPMQ8IZT6 3477 aa9.01□□□□□ -0.97
LINC00343-204ENST00000596398 BAZ2AQ9UIF9 1905 aaKnown RBP9.01□□□□□ -0.97
LINC00343-204ENST00000596398 LOC730098B7Z3J9 87 aa9.01□□□□□ -0.97
LINC00343-204ENST00000596398 PDE2AO00408 941 aaPredicted RBP9.01□□□□□ -0.97
LINC00343-204ENST00000596398 ATP2A1O14983 1001 aa9.01□□□□□ -0.97
LINC00343-204ENST00000596398 ZBED4O75132 1171 aa9.01□□□□□ -0.97
LINC00343-204ENST00000596398 PTGISQ16647 500 aa9.01□□□□□ -0.97
LINC00343-204ENST00000596398 LRRFIP1Q32MZ4 808 aaKnown RBP9.01□□□□□ -0.97
LINC00343-204ENST00000596398 TNNI3KQ59H18 835 aa9.01□□□□□ -0.97
LINC00343-204ENST00000596398 LRRC8DQ7L1W4 858 aa9.01□□□□□ -0.97
LINC00343-204ENST00000596398 MICAL3Q7RTP6 2002 aa9.01□□□□□ -0.97
LINC00343-204ENST00000596398 CERS3Q8IU89 383 aa9.01□□□□□ -0.97
LINC00343-204ENST00000596398 PRPF38AQ8NAV1 312 aaKnown RBP9.01□□□□□ -0.97
LINC00343-204ENST00000596398 CHST13Q8NET6 341 aa9.01□□□□□ -0.97
LINC00343-204ENST00000596398 SHKBP1Q8TBC3 707 aa9.01□□□□□ -0.97
LINC00343-204ENST00000596398 SLC7A3Q8WY07 619 aa9.01□□□□□ -0.97
LINC00343-204ENST00000596398 NKD2Q969F2 451 aaPredicted RBP9.01□□□□□ -0.97
LINC00343-204ENST00000596398 HHIPQ96QV1 700 aa9.01□□□□□ -0.97
LINC00343-204ENST00000596398 RUSC1Q9BVN2 902 aa9.01□□□□□ -0.97
LINC00343-204ENST00000596398 A1CFQ9NQ94 594 aaKnown RBP9.01□□□□□ -0.97
LINC00343-204ENST00000596398 SWAP70Q9UH65 585 aa9.01□□□□□ -0.97
LINC00343-204ENST00000596398 RALYQ9UKM9 306 aaKnown RBP9.01□□□□□ -0.97
LINC00343-204ENST00000596398 CTDP1Q9Y5B0 961 aaPredicted RBP9.01□□□□□ -0.97
LINC00343-204ENST00000596398 FPGT-TNNI3KV9GXZ4 949 aa9.01□□□□□ -0.97
LINC00343-204ENST00000596398 LCTP09848 1927 aa9.01□□□□□ -0.97
LINC00343-204ENST00000596398 ABHD14A-ACY1A0A1B0GW23 586 aa9□□□□□ -0.97
LINC00343-204ENST00000596398 ASB14A6NK59 587 aa9□□□□□ -0.97
LINC00343-204ENST00000596398 CXCL10P02778 98 aa9□□□□□ -0.97
LINC00343-204ENST00000596398 PCSK2P16519 638 aa9□□□□□ -0.97
LINC00343-204ENST00000596398 CDK8P49336 464 aa9□□□□□ -0.97
LINC00343-204ENST00000596398 HTRA4P83105 476 aaPredicted RBP9□□□□□ -0.97
LINC00343-204ENST00000596398 DNM1Q05193 864 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms