RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 PCNTO95613 3336 aa16.29■□□□□ 0.2
SHKBP1-211ENST00000595945 UBE4BO95155 1302 aa16.28■□□□□ 0.2
SHKBP1-211ENST00000595945 GAS2O43903 313 aaKnown RBP16.28■□□□□ 0.2
SHKBP1-211ENST00000595945 KPNA6O60684 536 aa16.28■□□□□ 0.2
SHKBP1-211ENST00000595945 C22orf31O95567 290 aa16.28■□□□□ 0.2
SHKBP1-211ENST00000595945 INHAP05111 366 aa16.28■□□□□ 0.2
SHKBP1-211ENST00000595945 RARBP10826 455 aa16.28■□□□□ 0.2
SHKBP1-211ENST00000595945 INSRRP14616 1297 aa16.28■□□□□ 0.2
SHKBP1-211ENST00000595945 ZNF18P17022 549 aa16.28■□□□□ 0.2
SHKBP1-211ENST00000595945 CNGA1P29973 690 aa16.28■□□□□ 0.2
SHKBP1-211ENST00000595945 NMT1P30419 496 aaKnown RBP16.28■□□□□ 0.2
SHKBP1-211ENST00000595945 GRK4P32298 578 aa16.28■□□□□ 0.2
SHKBP1-211ENST00000595945 HOXD13P35453 343 aa16.28■□□□□ 0.2
SHKBP1-211ENST00000595945 SOX10P56693 466 aa16.28■□□□□ 0.2
SHKBP1-211ENST00000595945 STX17P56962 302 aa16.28■□□□□ 0.2
SHKBP1-211ENST00000595945 MKRN4PQ13434 485 aaPredicted RBP16.28■□□□□ 0.2
SHKBP1-211ENST00000595945 ZCWPW2Q504Y3 356 aa16.28■□□□□ 0.2
SHKBP1-211ENST00000595945 FAM178BQ8IXR5 827 aa16.28■□□□□ 0.2
SHKBP1-211ENST00000595945 LINC01465Q8N7H1 131 aa16.28■□□□□ 0.2
SHKBP1-211ENST00000595945 KLHDC9Q8NEP7 349 aa16.28■□□□□ 0.2
SHKBP1-211ENST00000595945 SLC7A3Q8WY07 619 aa16.28■□□□□ 0.2
SHKBP1-211ENST00000595945 DUSP9Q99956 384 aaKnown RBP16.28■□□□□ 0.2
SHKBP1-211ENST00000595945 NTPCRQ9BSD7 190 aaKnown RBP16.28■□□□□ 0.2
SHKBP1-211ENST00000595945 POLR3FQ9H1D9 316 aaPredicted RBP16.28■□□□□ 0.2
SHKBP1-211ENST00000595945 MRPL44Q9H9J2 332 aaKnown RBP16.28■□□□□ 0.2
SHKBP1-211ENST00000595945 LARSQ9P2J5 1176 aaKnown RBP16.28■□□□□ 0.2
SHKBP1-211ENST00000595945 NFE2L3Q9Y4A8 694 aa16.28■□□□□ 0.2
SHKBP1-211ENST00000595945 BICDL2A1A5D9 508 aa16.27■□□□□ 0.2
SHKBP1-211ENST00000595945 TRIM49BA6NDI0 452 aa16.27■□□□□ 0.2
SHKBP1-211ENST00000595945 GOLGA6L19H0YKK7 550 aa16.27■□□□□ 0.2
SHKBP1-211ENST00000595945 AP5Z1O43299 807 aa16.27■□□□□ 0.2
SHKBP1-211ENST00000595945 KIF20AO95235 890 aa16.27■□□□□ 0.2
SHKBP1-211ENST00000595945 CST5P28325 142 aaPredicted RBP16.27■□□□□ 0.2
SHKBP1-211ENST00000595945 PSEN2P49810 448 aa16.27■□□□□ 0.2
SHKBP1-211ENST00000595945 PURAQ00577 322 aaKnown RBP16.27■□□□□ 0.2
SHKBP1-211ENST00000595945 TBC1D8BQ0IIM8 1120 aa16.27■□□□□ 0.2
SHKBP1-211ENST00000595945 ALCAMQ13740 583 aa16.27■□□□□ 0.2
SHKBP1-211ENST00000595945 ASAP3Q8TDY4 903 aa16.27■□□□□ 0.2
SHKBP1-211ENST00000595945 TRAPPC12Q8WVT3 735 aa16.27■□□□□ 0.2
SHKBP1-211ENST00000595945 JPH2Q9BR39 696 aaPredicted RBP16.27■□□□□ 0.2
SHKBP1-211ENST00000595945 KCTD10Q9H3F6 313 aa16.27■□□□□ 0.2
SHKBP1-211ENST00000595945 DDX20Q9UHI6 824 aaKnown RBP16.27■□□□□ 0.2
SHKBP1-211ENST00000595945 PTPN22Q9Y2R2 807 aa16.27■□□□□ 0.2
SHKBP1-211ENST00000595945 MAGEB2O15479 319 aa16.26■□□□□ 0.19
SHKBP1-211ENST00000595945 PRPF6O94906 941 aaKnown RBP16.26■□□□□ 0.19
SHKBP1-211ENST00000595945 GCNT3O95395 438 aa16.26■□□□□ 0.19
SHKBP1-211ENST00000595945 PGK1P00558 417 aa16.26■□□□□ 0.19
SHKBP1-211ENST00000595945 MYL3P08590 195 aa16.26■□□□□ 0.19
SHKBP1-211ENST00000595945 C6orf222P0C671 652 aaPredicted RBP16.26■□□□□ 0.19
SHKBP1-211ENST00000595945 GLRA2P23416 452 aa16.26■□□□□ 0.19
SHKBP1-211ENST00000595945 NPTX2P47972 431 aa16.26■□□□□ 0.19
SHKBP1-211ENST00000595945 PEX3P56589 373 aa16.26■□□□□ 0.19
SHKBP1-211ENST00000595945 GTF2BQ00403 316 aa16.26■□□□□ 0.19
SHKBP1-211ENST00000595945 MFSD10Q14728 455 aa16.26■□□□□ 0.19
SHKBP1-211ENST00000595945 CDKAL1Q5VV42 579 aa16.26■□□□□ 0.19
SHKBP1-211ENST00000595945 IER5Q5VY09 327 aa16.26■□□□□ 0.19
SHKBP1-211ENST00000595945 ANKRD40Q6AI12 368 aa16.26■□□□□ 0.19
SHKBP1-211ENST00000595945 CCSAPQ6IQ19 270 aaPredicted RBP16.26■□□□□ 0.19
SHKBP1-211ENST00000595945 SARM1Q6SZW1 724 aa16.26■□□□□ 0.19
SHKBP1-211ENST00000595945 SLC17A8Q8NDX2 589 aa16.26■□□□□ 0.19
SHKBP1-211ENST00000595945 TMEM143Q96AN5 459 aa16.26■□□□□ 0.19
SHKBP1-211ENST00000595945 XPNPEP3Q9NQH7 507 aa16.26■□□□□ 0.19
SHKBP1-211ENST00000595945 FANCLQ9NW38 375 aa16.26■□□□□ 0.19
SHKBP1-211ENST00000595945 ZMYM2Q9UBW7 1377 aa16.26■□□□□ 0.19
SHKBP1-211ENST00000595945 HTTP42858 3142 aa16.25■□□□□ 0.19
SHKBP1-211ENST00000595945 HOXC8P31273 242 aa16.25■□□□□ 0.19
SHKBP1-211ENST00000595945 LRRC63Q05C16 580 aa16.25■□□□□ 0.19
SHKBP1-211ENST00000595945 PPFIA1Q13136 1202 aa16.25■□□□□ 0.19
SHKBP1-211ENST00000595945 DRP2Q13474 957 aa16.25■□□□□ 0.19
SHKBP1-211ENST00000595945 GRIK4Q16099 956 aa16.25■□□□□ 0.19
SHKBP1-211ENST00000595945 KNOP1Q1ED39 458 aaKnown RBP16.25■□□□□ 0.19
SHKBP1-211ENST00000595945 KIAA0753Q2KHM9 967 aa16.25■□□□□ 0.19
SHKBP1-211ENST00000595945 ZC2HC1CQ53FD0 456 aaPredicted RBP16.25■□□□□ 0.19
SHKBP1-211ENST00000595945 MARCH8Q5T0T0 291 aa16.25■□□□□ 0.19
SHKBP1-211ENST00000595945 MTHFD1LQ6UB35 978 aa16.25■□□□□ 0.19
SHKBP1-211ENST00000595945 STXBP4Q6ZWJ1 553 aa16.25■□□□□ 0.19
SHKBP1-211ENST00000595945 NELFCDQ8IXH7 590 aa16.25■□□□□ 0.19
SHKBP1-211ENST00000595945 ZC3H3Q8IXZ2 948 aaKnown RBP16.25■□□□□ 0.19
SHKBP1-211ENST00000595945 TMEM161BQ8NDZ6 487 aa16.25■□□□□ 0.19
SHKBP1-211ENST00000595945 TCP11Q8WWU5 503 aa16.25■□□□□ 0.19
SHKBP1-211ENST00000595945 HVCN1Q96D96 273 aa16.25■□□□□ 0.19
SHKBP1-211ENST00000595945 IFT74Q96LB3 600 aa16.25■□□□□ 0.19
SHKBP1-211ENST00000595945 SPC25Q9HBM1 224 aa16.25■□□□□ 0.19
SHKBP1-211ENST00000595945 SAMSN1Q9NSI8 373 aaKnown RBP16.25■□□□□ 0.19
SHKBP1-211ENST00000595945 ARHGAP28Q9P2N2 729 aa16.25■□□□□ 0.19
SHKBP1-211ENST00000595945 KCNG1Q9UIX4 513 aa16.25■□□□□ 0.19
SHKBP1-211ENST00000595945 PCDHB13Q9Y5F0 798 aa16.25■□□□□ 0.19
SHKBP1-211ENST00000595945 ADGRA3Q8IWK6 1321 aa16.24■□□□□ 0.19
SHKBP1-211ENST00000595945 RRN3P2A6NIE6 340 aa16.24■□□□□ 0.19
SHKBP1-211ENST00000595945 K7ENM7 598 aa16.24■□□□□ 0.19
SHKBP1-211ENST00000595945 PDXKO00764 312 aa16.24■□□□□ 0.19
SHKBP1-211ENST00000595945 SLC16A4O15374 487 aa16.24■□□□□ 0.19
SHKBP1-211ENST00000595945 ZEB2O60315 1214 aa16.24■□□□□ 0.19
SHKBP1-211ENST00000595945 MSCO60682 206 aa16.24■□□□□ 0.19
SHKBP1-211ENST00000595945 SMIM10L2AP0DMW4 78 aa16.24■□□□□ 0.19
SHKBP1-211ENST00000595945 SMIM10L2BP0DMW5 78 aa16.24■□□□□ 0.19
SHKBP1-211ENST00000595945 HSPA8P11142 646 aaKnown RBP16.24■□□□□ 0.19
SHKBP1-211ENST00000595945 KLRC1P26715 233 aa16.24■□□□□ 0.19
SHKBP1-211ENST00000595945 NAMPTP43490 491 aa16.24■□□□□ 0.19
SHKBP1-211ENST00000595945 SMTNP53814 917 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms