RNA–Protein interactions for RNA: ENST00000595240.5

IRF3-210, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-210ENST00000595240 RGL1Q9NZL6 768 aa17.96■□□□□ 0.47
IRF3-210ENST00000595240 LRFN2Q9ULH4 789 aa17.96■□□□□ 0.47
IRF3-210ENST00000595240 PCDHA12Q9UN75 941 aa17.96■□□□□ 0.47
IRF3-210ENST00000595240 COG5Q9UP83 839 aa17.96■□□□□ 0.47
IRF3-210ENST00000595240 PPME1Q9Y570 386 aa17.96■□□□□ 0.47
IRF3-210ENST00000595240 PCDHB7Q9Y5E2 793 aa17.96■□□□□ 0.47
IRF3-210ENST00000595240 MRPL42Q9Y6G3 142 aaKnown RBP17.96■□□□□ 0.47
IRF3-210ENST00000595240 XIRP2A4UGR9 3374 aa17.96■□□□□ 0.46
IRF3-210ENST00000595240 TTC28Q96AY4 2481 aa17.95■□□□□ 0.46
IRF3-210ENST00000595240 NPEPPSP55786 919 aa17.95■□□□□ 0.46
IRF3-210ENST00000595240 TFF2Q03403 129 aa17.95■□□□□ 0.46
IRF3-210ENST00000595240 ZNF579Q8NAF0 562 aaKnown RBP17.95■□□□□ 0.46
IRF3-210ENST00000595240 NLRP7Q8WX94 980 aa17.95■□□□□ 0.46
IRF3-210ENST00000595240 DYDC2Q96IM9 177 aa17.95■□□□□ 0.46
IRF3-210ENST00000595240 SCLT1Q96NL6 688 aa17.95■□□□□ 0.46
IRF3-210ENST00000595240 JPH2Q9BR39 696 aaPredicted RBP17.95■□□□□ 0.46
IRF3-210ENST00000595240 C11orf84Q9BUA3 381 aaPredicted RBP17.95■□□□□ 0.46
IRF3-210ENST00000595240 FOXP1Q9H334 677 aaPredicted RBP17.95■□□□□ 0.46
IRF3-210ENST00000595240 ZSWIM4Q9H7M6 989 aa17.95■□□□□ 0.46
IRF3-210ENST00000595240 TTC12Q9H892 705 aaPredicted RBP17.95■□□□□ 0.46
IRF3-210ENST00000595240 SUCLA2Q9P2R7 463 aaPredicted RBP17.95■□□□□ 0.46
IRF3-210ENST00000595240 LOXHD1Q8IVV2 1947 aa17.94■□□□□ 0.46
IRF3-210ENST00000595240 YWHABP31946 246 aaKnown RBP17.94■□□□□ 0.46
IRF3-210ENST00000595240 GATMP50440 423 aa17.94■□□□□ 0.46
IRF3-210ENST00000595240 CYP4A11Q02928 519 aa17.94■□□□□ 0.46
IRF3-210ENST00000595240 PAN2Q504Q3 1202 aaKnown RBP17.94■□□□□ 0.46
IRF3-210ENST00000595240 IL27Q8NEV9 243 aa17.94■□□□□ 0.46
IRF3-210ENST00000595240 SLC7A3Q8WY07 619 aa17.94■□□□□ 0.46
IRF3-210ENST00000595240 HLA-CQ95604 372 aa17.94■□□□□ 0.46
IRF3-210ENST00000595240 CEP170P1Q96L14 293 aa17.94■□□□□ 0.46
IRF3-210ENST00000595240 HSD17B14Q9BPX1 270 aa17.94■□□□□ 0.46
IRF3-210ENST00000595240 PLVAPQ9BX97 442 aa17.94■□□□□ 0.46
IRF3-210ENST00000595240 DHX33Q9H6R0 707 aaKnown RBP17.94■□□□□ 0.46
IRF3-210ENST00000595240 ELAC1Q9H777 363 aaKnown RBP17.94■□□□□ 0.46
IRF3-210ENST00000595240 TMEM161AQ9NX61 479 aa17.94■□□□□ 0.46
IRF3-210ENST00000595240 SLITRK3O94933 977 aa17.93■□□□□ 0.46
IRF3-210ENST00000595240 IBSPP21815 317 aaPredicted RBP17.93■□□□□ 0.46
IRF3-210ENST00000595240 RFC5P40937 340 aa17.93■□□□□ 0.46
IRF3-210ENST00000595240 CTTNQ14247 550 aaKnown RBP17.93■□□□□ 0.46
IRF3-210ENST00000595240 AAK1Q2M2I8 961 aa17.93■□□□□ 0.46
IRF3-210ENST00000595240 TIGD5Q53EQ6 642 aa17.93■□□□□ 0.46
IRF3-210ENST00000595240 ZNF410Q86VK4 478 aa17.93■□□□□ 0.46
IRF3-210ENST00000595240 EXOC8Q8IYI6 725 aa17.93■□□□□ 0.46
IRF3-210ENST00000595240 FAM184AQ8NB25 1140 aa17.93■□□□□ 0.46
IRF3-210ENST00000595240 EIF2AK1Q9BQI3 630 aaKnown RBP17.93■□□□□ 0.46
IRF3-210ENST00000595240 GCOM2Q9BZD3 368 aaPredicted RBP17.93■□□□□ 0.46
IRF3-210ENST00000595240 TMEM60Q9H2L4 133 aa17.93■□□□□ 0.46
IRF3-210ENST00000595240 UPF2Q9HAU5 1272 aaKnown RBP17.93■□□□□ 0.46
IRF3-210ENST00000595240 A0A087WZ62 844 aa17.92■□□□□ 0.46
IRF3-210ENST00000595240 GRM6O15303 877 aa17.92■□□□□ 0.46
IRF3-210ENST00000595240 ST18O60284 1047 aa17.92■□□□□ 0.46
IRF3-210ENST00000595240 LYPLA2O95372 231 aa17.92■□□□□ 0.46
IRF3-210ENST00000595240 ZSCAN20P17040 1043 aaPredicted RBP17.92■□□□□ 0.46
IRF3-210ENST00000595240 ATP2B1P20020 1258 aa17.92■□□□□ 0.46
IRF3-210ENST00000595240 FGFR4P22455 802 aa17.92■□□□□ 0.46
IRF3-210ENST00000595240 MCM7P33993 719 aa17.92■□□□□ 0.46
IRF3-210ENST00000595240 TXKP42681 527 aa17.92■□□□□ 0.46
IRF3-210ENST00000595240 POLGP54098 1239 aaPredicted RBP17.92■□□□□ 0.46
IRF3-210ENST00000595240 FAM102BQ5T8I3 360 aa17.92■□□□□ 0.46
IRF3-210ENST00000595240 OTUD6AQ7L8S5 288 aa17.92■□□□□ 0.46
IRF3-210ENST00000595240 RHPN2Q8IUC4 686 aa17.92■□□□□ 0.46
IRF3-210ENST00000595240 TPH2Q8IWU9 490 aa17.92■□□□□ 0.46
IRF3-210ENST00000595240 NEK9Q8TD19 979 aa17.92■□□□□ 0.46
IRF3-210ENST00000595240 P2RX5Q93086 422 aa17.92■□□□□ 0.46
IRF3-210ENST00000595240 FDXACB1Q9BRP7 624 aaPredicted RBP17.92■□□□□ 0.46
IRF3-210ENST00000595240 LMAN2LQ9H0V9 348 aa17.92■□□□□ 0.46
IRF3-210ENST00000595240 ATP6V0A4Q9HBG4 840 aa17.92■□□□□ 0.46
IRF3-210ENST00000595240 RALGAPA2Q2PPJ7 1873 aa17.92■□□□□ 0.46
IRF3-210ENST00000595240 ZBTB39O15060 712 aa17.91■□□□□ 0.46
IRF3-210ENST00000595240 GAS2O43903 313 aaKnown RBP17.91■□□□□ 0.46
IRF3-210ENST00000595240 CSDE1O75534 798 aaKnown RBP17.91■□□□□ 0.46
IRF3-210ENST00000595240 FGFR1P11362 822 aa17.91■□□□□ 0.46
IRF3-210ENST00000595240 BMP1P13497 986 aa17.91■□□□□ 0.46
IRF3-210ENST00000595240 ORC2Q13416 577 aaPredicted RBP17.91■□□□□ 0.46
IRF3-210ENST00000595240 NAALADL2Q58DX5 795 aa17.91■□□□□ 0.46
IRF3-210ENST00000595240 ECHDC2Q86YB7 292 aa17.91■□□□□ 0.46
IRF3-210ENST00000595240 NOSTRINQ8IVI9 506 aa17.91■□□□□ 0.46
IRF3-210ENST00000595240 KSR1Q8IVT5 923 aa17.91■□□□□ 0.46
IRF3-210ENST00000595240 NLRP4Q96MN2 994 aa17.91■□□□□ 0.46
IRF3-210ENST00000595240 PLAGL2Q9UPG8 496 aa17.91■□□□□ 0.46
IRF3-210ENST00000595240 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.9■□□□□ 0.46
IRF3-210ENST00000595240 A0A0U1RQF3 1178 aa17.9■□□□□ 0.46
IRF3-210ENST00000595240 TBKBP1A7MCY6 615 aa17.9■□□□□ 0.46
IRF3-210ENST00000595240 SFPQP23246 707 aaKnown RBP eCLIP17.9■□□□□ 0.46
IRF3-210ENST00000595240 KCNQ1P51787 676 aa17.9■□□□□ 0.46
IRF3-210ENST00000595240 EMC2Q15006 297 aa17.9■□□□□ 0.46
IRF3-210ENST00000595240 XKR9Q5GH70 373 aa17.9■□□□□ 0.46
IRF3-210ENST00000595240 ADAMTS19Q8TE59 1207 aa17.9■□□□□ 0.46
IRF3-210ENST00000595240 PRPF31Q8WWY3 499 aaKnown RBP17.9■□□□□ 0.46
IRF3-210ENST00000595240 PSPC1Q8WXF1 523 aaKnown RBP17.9■□□□□ 0.46
IRF3-210ENST00000595240 TMEM143Q96AN5 459 aa17.9■□□□□ 0.46
IRF3-210ENST00000595240 TBC1D32Q96NH3 1257 aa17.9■□□□□ 0.46
IRF3-210ENST00000595240 INO80BQ9C086 356 aaPredicted RBP17.9■□□□□ 0.46
IRF3-210ENST00000595240 NSUN3Q9H649 340 aaKnown RBP17.9■□□□□ 0.46
IRF3-210ENST00000595240 IFT122Q9HBG6 1241 aa17.9■□□□□ 0.46
IRF3-210ENST00000595240 CHST12Q9NRB3 414 aa17.9■□□□□ 0.46
IRF3-210ENST00000595240 RNF19AQ9NV58 838 aa17.9■□□□□ 0.46
IRF3-210ENST00000595240 COL4A3BPQ9Y5P4 624 aa17.9■□□□□ 0.46
IRF3-210ENST00000595240 NLRC5Q86WI3 1866 aa17.89■□□□□ 0.45
IRF3-210ENST00000595240 POTEMA6NI47 508 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms