RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 JADE2Q9NQC1 790 aa18.62■□□□□ 0.57
SHKBP1-205ENST00000594973 ASTN1O14525 1302 aa18.62■□□□□ 0.57
SHKBP1-205ENST00000594973 TESPA1A2RU30 521 aaPredicted RBP18.62■□□□□ 0.57
SHKBP1-205ENST00000594973 ARHGEF35A5YM69 484 aa18.62■□□□□ 0.57
SHKBP1-205ENST00000594973 KIF3CO14782 793 aa18.62■□□□□ 0.57
SHKBP1-205ENST00000594973 SKOR1P84550 965 aa18.62■□□□□ 0.57
SHKBP1-205ENST00000594973 GHRHRQ02643 423 aa18.62■□□□□ 0.57
SHKBP1-205ENST00000594973 BAATQ14032 418 aaPredicted RBP18.62■□□□□ 0.57
SHKBP1-205ENST00000594973 SNRNP48Q6IEG0 339 aaKnown RBP18.62■□□□□ 0.57
SHKBP1-205ENST00000594973 CCDC170Q8IYT3 715 aa18.62■□□□□ 0.57
SHKBP1-205ENST00000594973 GPC2Q8N158 579 aa18.62■□□□□ 0.57
SHKBP1-205ENST00000594973 KLRG1Q96E93 195 aa18.62■□□□□ 0.57
SHKBP1-205ENST00000594973 SH2D3AQ9BRG2 576 aa18.62■□□□□ 0.57
SHKBP1-205ENST00000594973 ARHGAP20Q9P2F6 1191 aa18.62■□□□□ 0.57
SHKBP1-205ENST00000594973 FRMPD4Q14CM0 1322 aa18.62■□□□□ 0.57
SHKBP1-205ENST00000594973 GOLGA6BA6NDN3 693 aa18.61■□□□□ 0.57
SHKBP1-205ENST00000594973 H0YHG0 523 aa18.61■□□□□ 0.57
SHKBP1-205ENST00000594973 AKAP3O75969 853 aa18.61■□□□□ 0.57
SHKBP1-205ENST00000594973 TFRCP02786 760 aaKnown RBP18.61■□□□□ 0.57
SHKBP1-205ENST00000594973 NR3C1P04150 777 aa18.61■□□□□ 0.57
SHKBP1-205ENST00000594973 GNGT1P63211 74 aa18.61■□□□□ 0.57
SHKBP1-205ENST00000594973 KCNH2Q12809 1159 aa18.61■□□□□ 0.57
SHKBP1-205ENST00000594973 BMT2Q1RMZ1 405 aa18.61■□□□□ 0.57
SHKBP1-205ENST00000594973 MICALCLQ6ZW33 695 aa18.61■□□□□ 0.57
SHKBP1-205ENST00000594973 OTUD6BQ8N6M0 293 aa18.61■□□□□ 0.57
SHKBP1-205ENST00000594973 RIN2Q8WYP3 895 aaPredicted RBP18.61■□□□□ 0.57
SHKBP1-205ENST00000594973 BAP1Q92560 729 aa18.61■□□□□ 0.57
SHKBP1-205ENST00000594973 PXMP2Q9NR77 195 aa18.61■□□□□ 0.57
SHKBP1-205ENST00000594973 TYW1Q9NV66 732 aaKnown RBP18.61■□□□□ 0.57
SHKBP1-205ENST00000594973 ARMCX3Q9UH62 379 aaPredicted RBP18.61■□□□□ 0.57
SHKBP1-205ENST00000594973 RCCD1A6NED2 376 aa18.61■□□□□ 0.57
SHKBP1-205ENST00000594973 MEFVO15553 781 aaPredicted RBP18.61■□□□□ 0.57
SHKBP1-205ENST00000594973 CKAP4Q07065 602 aaKnown RBP18.61■□□□□ 0.57
SHKBP1-205ENST00000594973 DCAF17Q5H9S7 520 aaPredicted RBP18.61■□□□□ 0.57
SHKBP1-205ENST00000594973 ODR4Q5SWX8 454 aa18.61■□□□□ 0.57
SHKBP1-205ENST00000594973 FAM178BQ8IXR5 827 aa18.61■□□□□ 0.57
SHKBP1-205ENST00000594973 PDCD2LQ9BRP1 358 aa18.61■□□□□ 0.57
SHKBP1-205ENST00000594973 HAUS4Q9H6D7 363 aa18.61■□□□□ 0.57
SHKBP1-205ENST00000594973 KCNG1Q9UIX4 513 aa18.61■□□□□ 0.57
SHKBP1-205ENST00000594973 ATP9AO75110 1047 aa18.6■□□□□ 0.57
SHKBP1-205ENST00000594973 LMNB1P20700 586 aa18.6■□□□□ 0.57
SHKBP1-205ENST00000594973 MUTP22033 750 aa18.6■□□□□ 0.57
SHKBP1-205ENST00000594973 HNRNPH3P31942 346 aaKnown RBP18.6■□□□□ 0.57
SHKBP1-205ENST00000594973 CASP4P49662 377 aa18.6■□□□□ 0.57
SHKBP1-205ENST00000594973 POLR2FP61218 127 aaKnown RBP18.6■□□□□ 0.57
SHKBP1-205ENST00000594973 CDK17Q00537 523 aa18.6■□□□□ 0.57
SHKBP1-205ENST00000594973 PLCB4Q15147 1175 aa18.6■□□□□ 0.57
SHKBP1-205ENST00000594973 CCNI2Q6ZMN8 369 aaPredicted RBP18.6■□□□□ 0.57
SHKBP1-205ENST00000594973 NIPA1Q7RTP0 329 aa18.6■□□□□ 0.57
SHKBP1-205ENST00000594973 JAKMIP2Q96AA8 810 aa18.6■□□□□ 0.57
SHKBP1-205ENST00000594973 SELENOOQ9BVL4 669 aa18.6■□□□□ 0.57
SHKBP1-205ENST00000594973 LACRTQ9GZZ8 138 aa18.6■□□□□ 0.57
SHKBP1-205ENST00000594973 MAP3K20Q9NYL2 800 aaKnown RBP18.6■□□□□ 0.57
SHKBP1-205ENST00000594973 FAM184BQ9ULE4 1060 aa18.6■□□□□ 0.57
SHKBP1-205ENST00000594973 PCDHB13Q9Y5F0 798 aa18.6■□□□□ 0.57
SHKBP1-205ENST00000594973 DOCK1Q14185 1865 aa18.6■□□□□ 0.57
SHKBP1-205ENST00000594973 RBBP6Q7Z6E9 1792 aaKnown RBP18.6■□□□□ 0.57
SHKBP1-205ENST00000594973 ZNF263O14978 683 aa18.6■□□□□ 0.57
SHKBP1-205ENST00000594973 TGFB1I1O43294 461 aa18.6■□□□□ 0.57
SHKBP1-205ENST00000594973 NOL4O94818 638 aa18.6■□□□□ 0.57
SHKBP1-205ENST00000594973 P4HBP07237 508 aaKnown RBP18.6■□□□□ 0.57
SHKBP1-205ENST00000594973 EIF4A3P38919 411 aaKnown RBP18.6■□□□□ 0.57
SHKBP1-205ENST00000594973 WLSQ5T9L3 541 aa18.6■□□□□ 0.57
SHKBP1-205ENST00000594973 TCERG1LQ5VWI1 586 aa18.6■□□□□ 0.57
SHKBP1-205ENST00000594973 RUBCNQ92622 972 aa18.6■□□□□ 0.57
SHKBP1-205ENST00000594973 DUSP10Q9Y6W6 482 aa18.6■□□□□ 0.57
SHKBP1-205ENST00000594973 OPA1O60313 960 aa18.59■□□□□ 0.57
SHKBP1-205ENST00000594973 ZEB2O60315 1214 aa18.59■□□□□ 0.57
SHKBP1-205ENST00000594973 HIP1RO75146 1068 aa18.59■□□□□ 0.57
SHKBP1-205ENST00000594973 EPB41P11171 864 aaKnown RBP18.59■□□□□ 0.57
SHKBP1-205ENST00000594973 RPL13P26373 211 aaKnown RBP18.59■□□□□ 0.57
SHKBP1-205ENST00000594973 NF2P35240 595 aa18.59■□□□□ 0.57
SHKBP1-205ENST00000594973 PLS1Q14651 629 aa18.59■□□□□ 0.57
SHKBP1-205ENST00000594973 SPA17Q15506 151 aa18.59■□□□□ 0.57
SHKBP1-205ENST00000594973 PDXDC1Q6P996 788 aa18.59■□□□□ 0.57
SHKBP1-205ENST00000594973 PADI6Q6TGC4 694 aa18.59■□□□□ 0.57
SHKBP1-205ENST00000594973 FRMD5Q7Z6J6 570 aa18.59■□□□□ 0.57
SHKBP1-205ENST00000594973 ZMYM2Q9UBW7 1377 aa18.59■□□□□ 0.57
SHKBP1-205ENST00000594973 TMEM150BA6NC51 233 aa18.58■□□□□ 0.57
SHKBP1-205ENST00000594973 DDNO94850 711 aaPredicted RBP18.58■□□□□ 0.57
SHKBP1-205ENST00000594973 XRCC5P13010 732 aaKnown RBP18.58■□□□□ 0.57
SHKBP1-205ENST00000594973 DSG3P32926 999 aa18.58■□□□□ 0.57
SHKBP1-205ENST00000594973 COG2Q14746 738 aa18.58■□□□□ 0.57
SHKBP1-205ENST00000594973 TMEM132BQ14DG7 1078 aa18.58■□□□□ 0.57
SHKBP1-205ENST00000594973 ZNF720Q7Z2F6 126 aa18.58■□□□□ 0.57
SHKBP1-205ENST00000594973 NEK9Q8TD19 979 aa18.58■□□□□ 0.57
SHKBP1-205ENST00000594973 FIZ1Q96SL8 496 aa18.58■□□□□ 0.57
SHKBP1-205ENST00000594973 CEP72Q9P209 647 aa18.58■□□□□ 0.57
SHKBP1-205ENST00000594973 TCEAL9Q9UHQ7 104 aa18.58■□□□□ 0.57
SHKBP1-205ENST00000594973 KRT86O43790 486 aa18.58■□□□□ 0.56
SHKBP1-205ENST00000594973 AKR1B10O60218 316 aa18.58■□□□□ 0.56
SHKBP1-205ENST00000594973 FDX1P10109 184 aa18.58■□□□□ 0.56
SHKBP1-205ENST00000594973 KIF11P52732 1056 aa18.58■□□□□ 0.56
SHKBP1-205ENST00000594973 ZNF131P52739 623 aa18.58■□□□□ 0.56
SHKBP1-205ENST00000594973 SMTNP53814 917 aa18.58■□□□□ 0.56
SHKBP1-205ENST00000594973 REPS2Q8NFH8 660 aa18.58■□□□□ 0.56
SHKBP1-205ENST00000594973 TBC1D22BQ9NU19 505 aa18.58■□□□□ 0.56
SHKBP1-205ENST00000594973 TMOD4Q9NZQ9 345 aa18.58■□□□□ 0.56
SHKBP1-205ENST00000594973 KCND2Q9NZV8 630 aa18.58■□□□□ 0.56
SHKBP1-205ENST00000594973 ZNF214Q9UL59 606 aaPredicted RBP18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms