RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 POTEDQ86YR6 584 aa26.35■■□□□ 1.81
LSM4-204ENST00000594828 NLRP7Q8WX94 980 aa26.35■■□□□ 1.81
LSM4-204ENST00000594828 TNFRSF25Q93038 417 aa26.35■■□□□ 1.81
LSM4-204ENST00000594828 ELAC1Q9H777 363 aaKnown RBP26.35■■□□□ 1.81
LSM4-204ENST00000594828 ATP6V0A4Q9HBG4 840 aa26.35■■□□□ 1.81
LSM4-204ENST00000594828 TMEM161AQ9NX61 479 aa26.35■■□□□ 1.81
LSM4-204ENST00000594828 IGKV6-21A0A0C4DH24 114 aa26.34■■□□□ 1.81
LSM4-204ENST00000594828 TBKBP1A7MCY6 615 aa26.34■■□□□ 1.81
LSM4-204ENST00000594828 MAFO75444 373 aaPredicted RBP26.34■■□□□ 1.81
LSM4-204ENST00000594828 BAG4O95429 457 aaKnown RBP26.34■■□□□ 1.81
LSM4-204ENST00000594828 MMP1P03956 469 aa26.34■■□□□ 1.81
LSM4-204ENST00000594828 P4HBP07237 508 aaKnown RBP26.34■■□□□ 1.81
LSM4-204ENST00000594828 TRIM29Q14134 588 aa26.34■■□□□ 1.81
LSM4-204ENST00000594828 LEXMQ3ZCV2 418 aa26.34■■□□□ 1.81
LSM4-204ENST00000594828 SLFN12Q8IYM2 578 aa26.34■■□□□ 1.81
LSM4-204ENST00000594828 FOSBP53539 338 aa26.33■■□□□ 1.81
LSM4-204ENST00000594828 EPHA7Q15375 998 aa26.33■■□□□ 1.81
LSM4-204ENST00000594828 KLHL23Q8NBE8 558 aa26.33■■□□□ 1.81
LSM4-204ENST00000594828 JPH2Q9BR39 696 aaPredicted RBP26.33■■□□□ 1.81
LSM4-204ENST00000594828 LIMCH1Q9UPQ0 1083 aa26.33■■□□□ 1.81
LSM4-204ENST00000594828 BTBD18B2RXH4 712 aa26.32■■□□□ 1.8
LSM4-204ENST00000594828 ITGB1P05556 798 aa26.32■■□□□ 1.8
LSM4-204ENST00000594828 SPOUT1Q5T280 376 aaKnown RBP26.32■■□□□ 1.8
LSM4-204ENST00000594828 PLA2G4FQ68DD2 849 aa26.32■■□□□ 1.8
LSM4-204ENST00000594828 EP400NLQ6ZTU2 488 aa26.32■■□□□ 1.8
LSM4-204ENST00000594828 SPPL3Q8TCT6 385 aa26.32■■□□□ 1.8
LSM4-204ENST00000594828 PABPC5Q96DU9 382 aaKnown RBP26.32■■□□□ 1.8
LSM4-204ENST00000594828 GCOM2Q9BZD3 368 aaPredicted RBP26.32■■□□□ 1.8
LSM4-204ENST00000594828 CYP26B1Q9NR63 512 aa26.32■■□□□ 1.8
LSM4-204ENST00000594828 SUCLA2Q9P2R7 463 aaPredicted RBP26.32■■□□□ 1.8
LSM4-204ENST00000594828 NCK2O43639 380 aa26.31■■□□□ 1.8
LSM4-204ENST00000594828 CSPG5O95196 566 aa26.31■■□□□ 1.8
LSM4-204ENST00000594828 FGFR1P11362 822 aa26.31■■□□□ 1.8
LSM4-204ENST00000594828 FGFR4P22455 802 aa26.31■■□□□ 1.8
LSM4-204ENST00000594828 CAMK1Q14012 370 aa26.31■■□□□ 1.8
LSM4-204ENST00000594828 NCAPH2Q6IBW4 605 aa26.31■■□□□ 1.8
LSM4-204ENST00000594828 DIS3L2Q8IYB7 885 aaKnown RBP26.31■■□□□ 1.8
LSM4-204ENST00000594828 GADD45GIP1Q8TAE8 222 aaPredicted RBP26.31■■□□□ 1.8
LSM4-204ENST00000594828 AAASQ9NRG9 546 aa26.31■■□□□ 1.8
LSM4-204ENST00000594828 PCDHB12Q9Y5F1 795 aa26.31■■□□□ 1.8
LSM4-204ENST00000594828 TTC28Q96AY4 2481 aa26.31■■□□□ 1.8
LSM4-204ENST00000594828 CSDE1O75534 798 aaKnown RBP26.3■■□□□ 1.8
LSM4-204ENST00000594828 NPEPPSP55786 919 aa26.3■■□□□ 1.8
LSM4-204ENST00000594828 ST3GAL1Q11201 340 aa26.3■■□□□ 1.8
LSM4-204ENST00000594828 COL19A1Q14993 1142 aa26.3■■□□□ 1.8
LSM4-204ENST00000594828 RHPN2Q8IUC4 686 aa26.3■■□□□ 1.8
LSM4-204ENST00000594828 NEK9Q8TD19 979 aa26.3■■□□□ 1.8
LSM4-204ENST00000594828 CEP170P1Q96L14 293 aa26.3■■□□□ 1.8
LSM4-204ENST00000594828 TYW1Q9NV66 732 aaKnown RBP26.3■■□□□ 1.8
LSM4-204ENST00000594828 CLDND1Q9NY35 253 aa26.3■■□□□ 1.8
LSM4-204ENST00000594828 RGL1Q9NZL6 768 aa26.3■■□□□ 1.8
LSM4-204ENST00000594828 WRAP73Q9P2S5 460 aaPredicted RBP26.3■■□□□ 1.8
LSM4-204ENST00000594828 A0A087WZ62 844 aa26.29■■□□□ 1.8
LSM4-204ENST00000594828 HOXA2O43364 376 aa26.29■■□□□ 1.8
LSM4-204ENST00000594828 DNAJB1P25685 340 aa26.29■■□□□ 1.8
LSM4-204ENST00000594828 SPIRE1Q08AE8 756 aa26.29■■□□□ 1.8
LSM4-204ENST00000594828 ZNF410Q86VK4 478 aa26.29■■□□□ 1.8
LSM4-204ENST00000594828 ECHDC2Q86YB7 292 aa26.29■■□□□ 1.8
LSM4-204ENST00000594828 C4orf19Q8IY42 314 aa26.29■■□□□ 1.8
LSM4-204ENST00000594828 EXOC8Q8IYI6 725 aa26.29■■□□□ 1.8
LSM4-204ENST00000594828 POF1BQ8WVV4 589 aa26.29■■□□□ 1.8
LSM4-204ENST00000594828 SLC7A3Q8WY07 619 aa26.29■■□□□ 1.8
LSM4-204ENST00000594828 FDXACB1Q9BRP7 624 aaPredicted RBP26.29■■□□□ 1.8
LSM4-204ENST00000594828 LXNQ9BS40 222 aa26.29■■□□□ 1.8
LSM4-204ENST00000594828 INO80BQ9C086 356 aaPredicted RBP26.29■■□□□ 1.8
LSM4-204ENST00000594828 TMEM117Q9H0C3 514 aa26.29■■□□□ 1.8
LSM4-204ENST00000594828 PCDHA12Q9UN75 941 aa26.29■■□□□ 1.8
LSM4-204ENST00000594828 PPME1Q9Y570 386 aa26.29■■□□□ 1.8
LSM4-204ENST00000594828 H3BQ06 376 aaPredicted RBP26.28■■□□□ 1.8
LSM4-204ENST00000594828 HYAL1Q12794 435 aa26.28■■□□□ 1.8
LSM4-204ENST00000594828 PUS10Q3MIT2 529 aaKnown RBP26.28■■□□□ 1.8
LSM4-204ENST00000594828 PTCRAQ6ISU1 281 aaPredicted RBP26.28■■□□□ 1.8
LSM4-204ENST00000594828 OTUD6AQ7L8S5 288 aa26.28■■□□□ 1.8
LSM4-204ENST00000594828 ZNF579Q8NAF0 562 aaKnown RBP26.28■■□□□ 1.8
LSM4-204ENST00000594828 DYDC2Q96IM9 177 aa26.28■■□□□ 1.8
LSM4-204ENST00000594828 ZSWIM4Q9H7M6 989 aa26.28■■□□□ 1.8
LSM4-204ENST00000594828 CHST12Q9NRB3 414 aa26.28■■□□□ 1.8
LSM4-204ENST00000594828 DACT1Q9NYF0 836 aa26.28■■□□□ 1.8
LSM4-204ENST00000594828 KIAA1671Q9BY89 1806 aa26.28■■□□□ 1.8
LSM4-204ENST00000594828 FNDC1Q4ZHG4 1894 aaPredicted RBP26.28■■□□□ 1.8
LSM4-204ENST00000594828 A0A0U1RQF3 1178 aa26.27■■□□□ 1.8
LSM4-204ENST00000594828 YWHABP31946 246 aaKnown RBP26.27■■□□□ 1.8
LSM4-204ENST00000594828 POLGP54098 1239 aaPredicted RBP26.27■■□□□ 1.8
LSM4-204ENST00000594828 CTTNQ14247 550 aaKnown RBP26.27■■□□□ 1.8
LSM4-204ENST00000594828 CALCRLQ16602 461 aa26.27■■□□□ 1.8
LSM4-204ENST00000594828 KSR1Q8IVT5 923 aa26.27■■□□□ 1.8
LSM4-204ENST00000594828 CCDC83Q8IWF9 413 aa26.27■■□□□ 1.8
LSM4-204ENST00000594828 ABI1Q8IZP0 508 aa26.27■■□□□ 1.8
LSM4-204ENST00000594828 RNF169Q8NCN4 708 aa26.27■■□□□ 1.8
LSM4-204ENST00000594828 IGFLR1Q9H665 355 aa26.27■■□□□ 1.8
LSM4-204ENST00000594828 SFPQP23246 707 aaKnown RBP eCLIP26.26■■□□□ 1.79
LSM4-204ENST00000594828 CYP4A11Q02928 519 aa26.26■■□□□ 1.79
LSM4-204ENST00000594828 SAFBQ15424 915 aaKnown RBP eCLIP26.26■■□□□ 1.79
LSM4-204ENST00000594828 CTC1Q2NKJ3 1217 aa26.26■■□□□ 1.79
LSM4-204ENST00000594828 C8orf34Q49A92 452 aa26.26■■□□□ 1.79
LSM4-204ENST00000594828 TPH2Q8IWU9 490 aa26.26■■□□□ 1.79
LSM4-204ENST00000594828 PPP2R3CQ969Q6 453 aa26.26■■□□□ 1.79
LSM4-204ENST00000594828 NLRP4Q96MN2 994 aa26.26■■□□□ 1.79
LSM4-204ENST00000594828 CASD1Q96PB1 797 aa26.26■■□□□ 1.79
LSM4-204ENST00000594828 LLPHQ9BRT6 129 aaKnown RBP26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms