RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 EIF4BP23588 611 aaKnown RBP24.43■■□□□ 1.5
HOMER3-206ENST00000594439 CDC42EP1Q00587 391 aa24.43■■□□□ 1.5
HOMER3-206ENST00000594439 NFX1Q12986 1120 aaKnown RBP24.43■■□□□ 1.5
HOMER3-206ENST00000594439 RHPN2Q8IUC4 686 aa24.43■■□□□ 1.5
HOMER3-206ENST00000594439 SPRYD3Q8NCJ5 442 aa24.43■■□□□ 1.5
HOMER3-206ENST00000594439 SNX29Q8TEQ0 813 aa24.43■■□□□ 1.5
HOMER3-206ENST00000594439 NLRP7Q8WX94 980 aa24.43■■□□□ 1.5
HOMER3-206ENST00000594439 MTRQ99707 1265 aa24.43■■□□□ 1.5
HOMER3-206ENST00000594439 MMTAG2Q9BU76 263 aaKnown RBP24.43■■□□□ 1.5
HOMER3-206ENST00000594439 FTHL17Q9BXU8 183 aa24.43■■□□□ 1.5
HOMER3-206ENST00000594439 ZSCAN16Q9H4T2 348 aaPredicted RBP24.43■■□□□ 1.5
HOMER3-206ENST00000594439 ST3GAL5Q9UNP4 418 aa24.43■■□□□ 1.5
HOMER3-206ENST00000594439 TTC3P53804 2025 aa24.43■■□□□ 1.5
HOMER3-206ENST00000594439 MYH15Q9Y2K3 1946 aa24.43■■□□□ 1.5
HOMER3-206ENST00000594439 VWA3AA6NCI4 1184 aa24.42■■□□□ 1.5
HOMER3-206ENST00000594439 GPR182O15218 404 aa24.42■■□□□ 1.5
HOMER3-206ENST00000594439 TLL1O43897 1013 aa24.42■■□□□ 1.5
HOMER3-206ENST00000594439 DGAT1O75907 488 aa24.42■■□□□ 1.5
HOMER3-206ENST00000594439 CDC25AP30304 524 aa24.42■■□□□ 1.5
HOMER3-206ENST00000594439 ODR4Q5SWX8 454 aa24.42■■□□□ 1.5
HOMER3-206ENST00000594439 FAM117BQ6P1L5 589 aa24.42■■□□□ 1.5
HOMER3-206ENST00000594439 FAM43BQ6ZT52 329 aaPredicted RBP24.42■■□□□ 1.5
HOMER3-206ENST00000594439 ZNF410Q86VK4 478 aa24.42■■□□□ 1.5
HOMER3-206ENST00000594439 KSR1Q8IVT5 923 aa24.42■■□□□ 1.5
HOMER3-206ENST00000594439 PRPF31Q8WWY3 499 aaKnown RBP24.42■■□□□ 1.5
HOMER3-206ENST00000594439 TOP1MTQ969P6 601 aa24.42■■□□□ 1.5
HOMER3-206ENST00000594439 CCDC43Q96MW1 224 aaKnown RBP24.42■■□□□ 1.5
HOMER3-206ENST00000594439 FAM161BQ96MY7 647 aa24.42■■□□□ 1.5
HOMER3-206ENST00000594439 ZNF576Q9H609 170 aa24.42■■□□□ 1.5
HOMER3-206ENST00000594439 COL4A3BPQ9Y5P4 624 aa24.42■■□□□ 1.5
HOMER3-206ENST00000594439 A0A087WZ62 844 aa24.41■■□□□ 1.5
HOMER3-206ENST00000594439 MGEA5O60502 916 aa24.41■■□□□ 1.5
HOMER3-206ENST00000594439 PTPAQ15257 358 aa24.41■■□□□ 1.5
HOMER3-206ENST00000594439 KRT79Q5XKE5 535 aa24.41■■□□□ 1.5
HOMER3-206ENST00000594439 TCP11Q8WWU5 503 aa24.41■■□□□ 1.5
HOMER3-206ENST00000594439 PSPC1Q8WXF1 523 aaKnown RBP24.41■■□□□ 1.5
HOMER3-206ENST00000594439 SCLT1Q96NL6 688 aa24.41■■□□□ 1.5
HOMER3-206ENST00000594439 FDXACB1Q9BRP7 624 aaPredicted RBP24.41■■□□□ 1.5
HOMER3-206ENST00000594439 ZBED2Q9BTP6 218 aa24.41■■□□□ 1.5
HOMER3-206ENST00000594439 TSPYL2Q9H2G4 693 aaPredicted RBP24.41■■□□□ 1.5
HOMER3-206ENST00000594439 ATP6V0A4Q9HBG4 840 aa24.41■■□□□ 1.5
HOMER3-206ENST00000594439 KIAA1024Q9UPX6 916 aa24.41■■□□□ 1.5
HOMER3-206ENST00000594439 CLIC4Q9Y696 253 aa24.41■■□□□ 1.5
HOMER3-206ENST00000594439 ARHGEF15O94989 841 aa24.4■■□□□ 1.5
HOMER3-206ENST00000594439 CA3P07451 260 aa24.4■■□□□ 1.5
HOMER3-206ENST00000594439 RAD9AQ99638 391 aa24.4■■□□□ 1.5
HOMER3-206ENST00000594439 GCOM2Q9BZD3 368 aaPredicted RBP24.4■■□□□ 1.5
HOMER3-206ENST00000594439 SLC28A3Q9HAS3 691 aa24.4■■□□□ 1.5
HOMER3-206ENST00000594439 DDX19AQ9NUU7 478 aaKnown RBP24.4■■□□□ 1.5
HOMER3-206ENST00000594439 LCHNA4D1U4 455 aa24.39■■□□□ 1.49
HOMER3-206ENST00000594439 USO1O60763 962 aaKnown RBP24.39■■□□□ 1.49
HOMER3-206ENST00000594439 SLC34A2O95436 690 aa24.39■■□□□ 1.49
HOMER3-206ENST00000594439 PDIA4P13667 645 aaKnown RBP24.39■■□□□ 1.49
HOMER3-206ENST00000594439 HTRA4P83105 476 aaPredicted RBP24.39■■□□□ 1.49
HOMER3-206ENST00000594439 LAMTOR4Q0VGL1 99 aa24.39■■□□□ 1.49
HOMER3-206ENST00000594439 DSC3Q14574 896 aa24.39■■□□□ 1.49
HOMER3-206ENST00000594439 NLRP4Q96MN2 994 aa24.39■■□□□ 1.49
HOMER3-206ENST00000594439 GUCD1Q96NT3 240 aa24.39■■□□□ 1.49
HOMER3-206ENST00000594439 ASAP2O43150 1006 aa24.38■■□□□ 1.49
HOMER3-206ENST00000594439 CSDE1O75534 798 aaKnown RBP24.38■■□□□ 1.49
HOMER3-206ENST00000594439 UPP2O95045 317 aa24.38■■□□□ 1.49
HOMER3-206ENST00000594439 FGFR4P22455 802 aa24.38■■□□□ 1.49
HOMER3-206ENST00000594439 ARL2P36404 184 aa24.38■■□□□ 1.49
HOMER3-206ENST00000594439 GRIN1Q05586 938 aa24.38■■□□□ 1.49
HOMER3-206ENST00000594439 HYIQ5T013 277 aa24.38■■□□□ 1.49
HOMER3-206ENST00000594439 PPP2R2DQ66LE6 453 aa24.38■■□□□ 1.49
HOMER3-206ENST00000594439 CRIPAKQ8N1N5 446 aa24.38■■□□□ 1.49
HOMER3-206ENST00000594439 USP28Q96RU2 1077 aa24.38■■□□□ 1.49
HOMER3-206ENST00000594439 IFT122Q9HBG6 1241 aa24.38■■□□□ 1.49
HOMER3-206ENST00000594439 ARHGEF35A5YM69 484 aa24.37■■□□□ 1.49
HOMER3-206ENST00000594439 GRIN2CQ14957 1233 aa24.37■■□□□ 1.49
HOMER3-206ENST00000594439 PADI6Q6TGC4 694 aa24.37■■□□□ 1.49
HOMER3-206ENST00000594439 ASAP3Q8TDY4 903 aa24.37■■□□□ 1.49
HOMER3-206ENST00000594439 AK8Q96MA6 479 aa24.37■■□□□ 1.49
HOMER3-206ENST00000594439 PNMA5Q96PV4 448 aa24.37■■□□□ 1.49
HOMER3-206ENST00000594439 ADAM2Q99965 735 aa24.37■■□□□ 1.49
HOMER3-206ENST00000594439 BHMT2Q9H2M3 363 aa24.37■■□□□ 1.49
HOMER3-206ENST00000594439 RGS18Q9NS28 235 aa24.37■■□□□ 1.49
HOMER3-206ENST00000594439 INSL6Q9Y581 213 aa24.37■■□□□ 1.49
HOMER3-206ENST00000594439 E9PMD0 336 aa24.36■■□□□ 1.49
HOMER3-206ENST00000594439 SRGAP2CP0DJJ0 459 aa24.36■■□□□ 1.49
HOMER3-206ENST00000594439 ZSCAN22P10073 491 aaPredicted RBP24.36■■□□□ 1.49
HOMER3-206ENST00000594439 TAP1Q03518 808 aa24.36■■□□□ 1.49
HOMER3-206ENST00000594439 MXD4Q14582 209 aaPredicted RBP24.36■■□□□ 1.49
HOMER3-206ENST00000594439 KCNK18Q7Z418 384 aa24.36■■□□□ 1.49
HOMER3-206ENST00000594439 MCPH1Q8NEM0 835 aa24.36■■□□□ 1.49
HOMER3-206ENST00000594439 SP7Q8TDD2 431 aaPredicted RBP24.36■■□□□ 1.49
HOMER3-206ENST00000594439 INO80BQ9C086 356 aaPredicted RBP24.36■■□□□ 1.49
HOMER3-206ENST00000594439 POLR3FQ9H1D9 316 aaPredicted RBP24.36■■□□□ 1.49
HOMER3-206ENST00000594439 MYO9BQ13459 2157 aa24.35■■□□□ 1.49
HOMER3-206ENST00000594439 COL4A6Q14031 1691 aa24.35■■□□□ 1.49
HOMER3-206ENST00000594439 DENND3A2RUS2 1198 aa24.35■■□□□ 1.49
HOMER3-206ENST00000594439 C9IYK1 514 aa24.35■■□□□ 1.49
HOMER3-206ENST00000594439 EYA4O95677 639 aa24.35■■□□□ 1.49
HOMER3-206ENST00000594439 CYP11B2P19099 503 aa24.35■■□□□ 1.49
HOMER3-206ENST00000594439 GLRA2P23416 452 aa24.35■■□□□ 1.49
HOMER3-206ENST00000594439 LONP1P36776 959 aaKnown RBP24.35■■□□□ 1.49
HOMER3-206ENST00000594439 CEBPZQ03701 1054 aaKnown RBP24.35■■□□□ 1.49
HOMER3-206ENST00000594439 GRB10Q13322 594 aa24.35■■□□□ 1.49
HOMER3-206ENST00000594439 PKP1Q13835 747 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms