RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 NHLH1Q02575 133 aa12.06□□□□□ -0.48
USE1-203ENST00000593597 UBE3AQ05086 875 aa12.06□□□□□ -0.48
USE1-203ENST00000593597 SPOUT1Q5T280 376 aaKnown RBP12.06□□□□□ -0.48
USE1-203ENST00000593597 PLPP4Q5VZY2 271 aa12.06□□□□□ -0.48
USE1-203ENST00000593597 SYCE2Q6PIF2 218 aa12.06□□□□□ -0.48
USE1-203ENST00000593597 ECHDC2Q86YB7 292 aa12.06□□□□□ -0.48
USE1-203ENST00000593597 CCDC136Q96JN2 1154 aa12.06□□□□□ -0.48
USE1-203ENST00000593597 AIFM3Q96NN9 605 aa12.06□□□□□ -0.48
USE1-203ENST00000593597 POP1Q99575 1024 aaKnown RBP12.06□□□□□ -0.48
USE1-203ENST00000593597 SH2D3AQ9BRG2 576 aa12.06□□□□□ -0.48
USE1-203ENST00000593597 S1PR5Q9H228 398 aa12.06□□□□□ -0.48
USE1-203ENST00000593597 ATP6V0A4Q9HBG4 840 aa12.06□□□□□ -0.48
USE1-203ENST00000593597 DISC1Q9NRI5 854 aa12.06□□□□□ -0.48
USE1-203ENST00000593597 AKT3Q9Y243 479 aa12.06□□□□□ -0.48
USE1-203ENST00000593597 DMDP11532 3685 aa12.06□□□□□ -0.48
USE1-203ENST00000593597 CCDC196A0A1B0GTZ2 297 aa12.05□□□□□ -0.48
USE1-203ENST00000593597 PSMD10O75832 226 aa12.05□□□□□ -0.48
USE1-203ENST00000593597 DARSP14868 501 aaKnown RBP12.05□□□□□ -0.48
USE1-203ENST00000593597 LAG3P18627 525 aa12.05□□□□□ -0.48
USE1-203ENST00000593597 PLCB3Q01970 1234 aa12.05□□□□□ -0.48
USE1-203ENST00000593597 KCNT2Q6UVM3 1135 aa12.05□□□□□ -0.48
USE1-203ENST00000593597 ALYREFQ86V81 257 aaKnown RBP12.05□□□□□ -0.48
USE1-203ENST00000593597 THNSL1Q8IYQ7 743 aa12.05□□□□□ -0.48
USE1-203ENST00000593597 PRSS33Q8NF86 280 aa12.05□□□□□ -0.48
USE1-203ENST00000593597 TBCKQ8TEA7 893 aa12.05□□□□□ -0.48
USE1-203ENST00000593597 MRPS27Q92552 414 aaKnown RBP12.05□□□□□ -0.48
USE1-203ENST00000593597 EDAQ92838 391 aa12.05□□□□□ -0.48
USE1-203ENST00000593597 MBOAT7Q96N66 472 aa12.05□□□□□ -0.48
USE1-203ENST00000593597 PHOX2BQ99453 314 aa12.05□□□□□ -0.48
USE1-203ENST00000593597 LARP6Q9BRS8 491 aaKnown RBP12.05□□□□□ -0.48
USE1-203ENST00000593597 TMEM117Q9H0C3 514 aa12.05□□□□□ -0.48
USE1-203ENST00000593597 TLE6Q9H808 572 aa12.05□□□□□ -0.48
USE1-203ENST00000593597 PCDHB12Q9Y5F1 795 aa12.05□□□□□ -0.48
USE1-203ENST00000593597 PLXNA3P51805 1871 aa12.05□□□□□ -0.48
USE1-203ENST00000593597 IGKV6-21A0A0C4DH24 114 aa12.04□□□□□ -0.48
USE1-203ENST00000593597 MEIS3P2A8K0S8 358 aa12.04□□□□□ -0.48
USE1-203ENST00000593597 MAGEB2O15479 319 aa12.04□□□□□ -0.48
USE1-203ENST00000593597 B4GALT3O60512 393 aa12.04□□□□□ -0.48
USE1-203ENST00000593597 EIF4BP23588 611 aaKnown RBP12.04□□□□□ -0.48
USE1-203ENST00000593597 GNA11P29992 359 aa12.04□□□□□ -0.48
USE1-203ENST00000593597 FGD1P98174 961 aa12.04□□□□□ -0.48
USE1-203ENST00000593597 CSPP1Q1MSJ5 1256 aa12.04□□□□□ -0.48
USE1-203ENST00000593597 MCTP2Q6DN12 878 aa12.04□□□□□ -0.48
USE1-203ENST00000593597 TMEM184AQ6ZMB5 413 aa12.04□□□□□ -0.48
USE1-203ENST00000593597 TMEM173Q86WV6 379 aaPredicted RBP12.04□□□□□ -0.48
USE1-203ENST00000593597 ETNPPLQ8TBG4 499 aa12.04□□□□□ -0.48
USE1-203ENST00000593597 HELQQ8TDG4 1101 aa12.04□□□□□ -0.48
USE1-203ENST00000593597 CCDC12Q8WUD4 166 aaPredicted RBP12.04□□□□□ -0.48
USE1-203ENST00000593597 BCL7CQ8WUZ0 217 aaPredicted RBP12.04□□□□□ -0.48
USE1-203ENST00000593597 PPP2R3CQ969Q6 453 aa12.04□□□□□ -0.48
USE1-203ENST00000593597 FAM167AQ96KS9 214 aa12.04□□□□□ -0.48
USE1-203ENST00000593597 RIT2Q99578 217 aa12.04□□□□□ -0.48
USE1-203ENST00000593597 APOL5Q9BWW9 433 aa12.04□□□□□ -0.48
USE1-203ENST00000593597 PHF7Q9BWX1 381 aaPredicted RBP12.04□□□□□ -0.48
USE1-203ENST00000593597 UPF3BQ9BZI7 483 aaKnown RBP12.04□□□□□ -0.48
USE1-203ENST00000593597 CEP131Q9UPN4 1083 aa12.04□□□□□ -0.48
USE1-203ENST00000593597 LZTS1Q9Y250 596 aa12.04□□□□□ -0.48
USE1-203ENST00000593597 SAMM50Q9Y512 469 aa12.04□□□□□ -0.48
USE1-203ENST00000593597 CACNA1HO95180 2353 aa12.03□□□□□ -0.48
USE1-203ENST00000593597 CYP3A7-CYP3A51PA0A087WV96 503 aa12.03□□□□□ -0.48
USE1-203ENST00000593597 SLC37A4O43826 429 aa12.03□□□□□ -0.48
USE1-203ENST00000593597 GAS7O60861 476 aa12.03□□□□□ -0.48
USE1-203ENST00000593597 CYP3A7P24462 503 aa12.03□□□□□ -0.48
USE1-203ENST00000593597 ZXDAP98168 799 aa12.03□□□□□ -0.48
USE1-203ENST00000593597 Q4G0T1 1027 aa12.03□□□□□ -0.48
USE1-203ENST00000593597 ODR4Q5SWX8 454 aa12.03□□□□□ -0.48
USE1-203ENST00000593597 IER5LQ5T953 404 aa12.03□□□□□ -0.48
USE1-203ENST00000593597 LRCH2Q5VUJ6 765 aa12.03□□□□□ -0.48
USE1-203ENST00000593597 ANKRD54Q6NXT1 300 aa12.03□□□□□ -0.48
USE1-203ENST00000593597 LLGL2Q6P1M3 1020 aa12.03□□□□□ -0.48
USE1-203ENST00000593597 FAM43BQ6ZT52 329 aaPredicted RBP12.03□□□□□ -0.48
USE1-203ENST00000593597 TRIM67Q6ZTA4 783 aa12.03□□□□□ -0.48
USE1-203ENST00000593597 SLC39A11Q8N1S5 342 aa12.03□□□□□ -0.48
USE1-203ENST00000593597 LRRC43Q8N309 656 aa12.03□□□□□ -0.48
USE1-203ENST00000593597 CCDC148Q8NFR7 591 aa12.03□□□□□ -0.48
USE1-203ENST00000593597 MICAL1Q8TDZ2 1067 aa12.03□□□□□ -0.48
USE1-203ENST00000593597 ASIC4Q96FT7 647 aa12.03□□□□□ -0.48
USE1-203ENST00000593597 RPGRIP1Q96KN7 1286 aa12.03□□□□□ -0.48
USE1-203ENST00000593597 CDCA3Q99618 268 aaPredicted RBP12.03□□□□□ -0.48
USE1-203ENST00000593597 TCF25Q9BQ70 676 aa12.03□□□□□ -0.48
USE1-203ENST00000593597 TEKT3Q9BXF9 490 aa12.03□□□□□ -0.48
USE1-203ENST00000593597 SH3GLB2Q9NR46 395 aa12.03□□□□□ -0.48
USE1-203ENST00000593597 AAASQ9NRG9 546 aa12.03□□□□□ -0.48
USE1-203ENST00000593597 WRAP73Q9P2S5 460 aaPredicted RBP12.03□□□□□ -0.48
USE1-203ENST00000593597 VPS13AQ96RL7 3174 aa12.03□□□□□ -0.48
USE1-203ENST00000593597 A0A087WZ62 844 aa12.02□□□□□ -0.49
USE1-203ENST00000593597 A0A0U1RQF3 1178 aa12.02□□□□□ -0.49
USE1-203ENST00000593597 TMEM221A6NGB7 291 aa12.02□□□□□ -0.49
USE1-203ENST00000593597 NT5C1B-RDH14C9J2C7 533 aa12.02□□□□□ -0.49
USE1-203ENST00000593597 M0R296 226 aa12.02□□□□□ -0.49
USE1-203ENST00000593597 EML1O00423 815 aa12.02□□□□□ -0.49
USE1-203ENST00000593597 TECP42680 631 aa12.02□□□□□ -0.49
USE1-203ENST00000593597 USP11P51784 963 aa12.02□□□□□ -0.49
USE1-203ENST00000593597 JAK3P52333 1124 aa12.02□□□□□ -0.49
USE1-203ENST00000593597 MTERF2Q49AM1 385 aa12.02□□□□□ -0.49
USE1-203ENST00000593597 PLA2G4FQ68DD2 849 aa12.02□□□□□ -0.49
USE1-203ENST00000593597 RUFY3Q7L099 469 aa12.02□□□□□ -0.49
USE1-203ENST00000593597 BMP8AQ7Z5Y6 402 aa12.02□□□□□ -0.49
USE1-203ENST00000593597 KSR1Q8IVT5 923 aa12.02□□□□□ -0.49
USE1-203ENST00000593597 ZNF579Q8NAF0 562 aaKnown RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms