RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 OATP04181 439 aa14.89□□□□□ -0.03
VMP1-217ENST00000593168 MYCNP04198 464 aaPredicted RBP14.89□□□□□ -0.03
VMP1-217ENST00000593168 ZNF865P0CJ78 1059 aaPredicted RBP14.89□□□□□ -0.03
VMP1-217ENST00000593168 CCNE1P24864 410 aa14.89□□□□□ -0.03
VMP1-217ENST00000593168 SLC26A2P50443 739 aa14.89□□□□□ -0.03
VMP1-217ENST00000593168 SMAD3P84022 425 aaKnown RBP14.89□□□□□ -0.03
VMP1-217ENST00000593168 CACNB1Q02641 598 aaPredicted RBP14.89□□□□□ -0.03
VMP1-217ENST00000593168 RAD51AP2Q09MP3 1159 aa14.89□□□□□ -0.03
VMP1-217ENST00000593168 LRRC41Q15345 812 aa14.89□□□□□ -0.03
VMP1-217ENST00000593168 CCDC144BQ3MJ40 725 aa14.89□□□□□ -0.03
VMP1-217ENST00000593168 TMEM63BQ5T3F8 832 aa14.89□□□□□ -0.03
VMP1-217ENST00000593168 UTP14CQ5TAP6 766 aaKnown RBP14.89□□□□□ -0.03
VMP1-217ENST00000593168 FOXR2Q6PJQ5 311 aa14.89□□□□□ -0.03
VMP1-217ENST00000593168 SARM1Q6SZW1 724 aa14.89□□□□□ -0.03
VMP1-217ENST00000593168 NELFBQ8WX92 580 aa14.89□□□□□ -0.03
VMP1-217ENST00000593168 HPS3Q969F9 1004 aa14.89□□□□□ -0.03
VMP1-217ENST00000593168 FAM167AQ96KS9 214 aa14.89□□□□□ -0.03
VMP1-217ENST00000593168 PARVGQ9HBI0 331 aa14.89□□□□□ -0.03
VMP1-217ENST00000593168 OLFML3Q9NRN5 406 aa14.89□□□□□ -0.03
VMP1-217ENST00000593168 ZHX1Q9UKY1 873 aaPredicted RBP14.89□□□□□ -0.03
VMP1-217ENST00000593168 CTNND2Q9UQB3 1225 aa14.89□□□□□ -0.03
VMP1-217ENST00000593168 MAPK8IP1Q9UQF2 711 aa14.89□□□□□ -0.03
VMP1-217ENST00000593168 NFE2L3Q9Y4A8 694 aa14.89□□□□□ -0.03
VMP1-217ENST00000593168 PPME1Q9Y570 386 aa14.89□□□□□ -0.03
VMP1-217ENST00000593168 SYNRGQ9UMZ2 1314 aa14.89□□□□□ -0.03
VMP1-217ENST00000593168 BICDL2A1A5D9 508 aa14.88□□□□□ -0.03
VMP1-217ENST00000593168 RSPH10B2B2RC85 870 aa14.88□□□□□ -0.03
VMP1-217ENST00000593168 DGAT1O75907 488 aa14.88□□□□□ -0.03
VMP1-217ENST00000593168 RSPH10BP0C881 870 aa14.88□□□□□ -0.03
VMP1-217ENST00000593168 SMPD1P17405 629 aa14.88□□□□□ -0.03
VMP1-217ENST00000593168 ITGB8P26012 769 aa14.88□□□□□ -0.03
VMP1-217ENST00000593168 NPEPPSP55786 919 aa14.88□□□□□ -0.03
VMP1-217ENST00000593168 MAPK7Q13164 816 aa14.88□□□□□ -0.03
VMP1-217ENST00000593168 CENPPQ6IPU0 288 aa14.88□□□□□ -0.03
VMP1-217ENST00000593168 SFR1Q86XK3 245 aa14.88□□□□□ -0.03
VMP1-217ENST00000593168 MYOCDQ8IZQ8 938 aa14.88□□□□□ -0.03
VMP1-217ENST00000593168 PPTC7Q8NI37 304 aa14.88□□□□□ -0.03
VMP1-217ENST00000593168 P2RX5Q93086 422 aa14.88□□□□□ -0.03
VMP1-217ENST00000593168 CEP170P1Q96L14 293 aa14.88□□□□□ -0.03
VMP1-217ENST00000593168 HSD3B7Q9H2F3 369 aa14.88□□□□□ -0.03
VMP1-217ENST00000593168 ZHX3Q9H4I2 956 aa14.88□□□□□ -0.03
VMP1-217ENST00000593168 SMARCAD1Q9H4L7 1026 aa14.88□□□□□ -0.03
VMP1-217ENST00000593168 CYP26B1Q9NR63 512 aa14.88□□□□□ -0.03
VMP1-217ENST00000593168 FANCLQ9NW38 375 aa14.88□□□□□ -0.03
VMP1-217ENST00000593168 SEPT9Q9UHD8 586 aaPredicted RBP14.88□□□□□ -0.03
VMP1-217ENST00000593168 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.87□□□□□ -0.03
VMP1-217ENST00000593168 TMEM150BA6NC51 233 aa14.87□□□□□ -0.03
VMP1-217ENST00000593168 HIP1RO75146 1068 aa14.87□□□□□ -0.03
VMP1-217ENST00000593168 PPFIA4O75335 1185 aa14.87□□□□□ -0.03
VMP1-217ENST00000593168 MAPTP10636 758 aaKnown RBP14.87□□□□□ -0.03
VMP1-217ENST00000593168 FOSL2P15408 326 aa14.87□□□□□ -0.03
VMP1-217ENST00000593168 STX17P56962 302 aa14.87□□□□□ -0.03
VMP1-217ENST00000593168 TNFAIP2Q03169 654 aa14.87□□□□□ -0.03
VMP1-217ENST00000593168 CCDC173Q0VFZ6 552 aa14.87□□□□□ -0.03
VMP1-217ENST00000593168 C1orf53Q5VUE5 145 aa14.87□□□□□ -0.03
VMP1-217ENST00000593168 PLA2G4FQ68DD2 849 aa14.87□□□□□ -0.03
VMP1-217ENST00000593168 EPM2AIP1Q7L775 607 aaPredicted RBP14.87□□□□□ -0.03
VMP1-217ENST00000593168 DAW1Q8N136 415 aa14.87□□□□□ -0.03
VMP1-217ENST00000593168 MYCT1Q8N699 235 aa14.87□□□□□ -0.03
VMP1-217ENST00000593168 MCPH1Q8NEM0 835 aa14.87□□□□□ -0.03
VMP1-217ENST00000593168 BBXQ8WY36 941 aaPredicted RBP14.87□□□□□ -0.03
VMP1-217ENST00000593168 GLG1Q92896 1179 aa14.87□□□□□ -0.03
VMP1-217ENST00000593168 DRC1Q96MC2 740 aa14.87□□□□□ -0.03
VMP1-217ENST00000593168 LARSQ9P2J5 1176 aaKnown RBP14.87□□□□□ -0.03
VMP1-217ENST00000593168 Q9Y3F1 56 aa14.87□□□□□ -0.03
VMP1-217ENST00000593168 AP5Z1O43299 807 aa14.86□□□□□ -0.03
VMP1-217ENST00000593168 USO1O60763 962 aaKnown RBP14.86□□□□□ -0.03
VMP1-217ENST00000593168 HOXD8P13378 290 aaPredicted RBP14.86□□□□□ -0.03
VMP1-217ENST00000593168 ZNF18P17022 549 aa14.86□□□□□ -0.03
VMP1-217ENST00000593168 EPHB4P54760 987 aa14.86□□□□□ -0.03
VMP1-217ENST00000593168 PLCB2Q00722 1185 aa14.86□□□□□ -0.03
VMP1-217ENST00000593168 TLE2Q04725 743 aa14.86□□□□□ -0.03
VMP1-217ENST00000593168 TARBP2Q15633 366 aaKnown RBP14.86□□□□□ -0.03
VMP1-217ENST00000593168 BMT2Q1RMZ1 405 aa14.86□□□□□ -0.03
VMP1-217ENST00000593168 TTI2Q6NXR4 508 aa14.86□□□□□ -0.03
VMP1-217ENST00000593168 TRMT1LQ7Z2T5 733 aaKnown RBP14.86□□□□□ -0.03
VMP1-217ENST00000593168 ZNF507Q8TCN5 953 aa14.86□□□□□ -0.03
VMP1-217ENST00000593168 ATP8B4Q8TF62 1192 aa14.86□□□□□ -0.03
VMP1-217ENST00000593168 NOC3LQ8WTT2 800 aaKnown RBP14.86□□□□□ -0.03
VMP1-217ENST00000593168 AFG1LQ8WV93 481 aa14.86□□□□□ -0.03
VMP1-217ENST00000593168 SCFD1Q8WVM8 642 aa14.86□□□□□ -0.03
VMP1-217ENST00000593168 PPP1R9BQ96SB3 815 aa14.86□□□□□ -0.03
VMP1-217ENST00000593168 CEP89Q96ST8 783 aa14.86□□□□□ -0.03
VMP1-217ENST00000593168 MRPL44Q9H9J2 332 aaKnown RBP14.86□□□□□ -0.03
VMP1-217ENST00000593168 C17orf75Q9HAS0 396 aa14.86□□□□□ -0.03
VMP1-217ENST00000593168 PRDM6Q9NQX0 595 aa14.86□□□□□ -0.03
VMP1-217ENST00000593168 TBC1D7Q9P0N9 293 aa14.86□□□□□ -0.03
VMP1-217ENST00000593168 KCNG1Q9UIX4 513 aa14.86□□□□□ -0.03
VMP1-217ENST00000593168 GNEQ9Y223 722 aaKnown RBP14.86□□□□□ -0.03
VMP1-217ENST00000593168 SFI1A8K8P3 1242 aa14.85□□□□□ -0.03
VMP1-217ENST00000593168 EIF3DO15371 548 aaKnown RBP eCLIP14.85□□□□□ -0.03
VMP1-217ENST00000593168 ADCY5O95622 1261 aa14.85□□□□□ -0.03
VMP1-217ENST00000593168 PLS3P13797 630 aa14.85□□□□□ -0.03
VMP1-217ENST00000593168 RFC5P40937 340 aa14.85□□□□□ -0.03
VMP1-217ENST00000593168 PMS1P54277 932 aaKnown RBP14.85□□□□□ -0.03
VMP1-217ENST00000593168 LRRC63Q05C16 580 aa14.85□□□□□ -0.03
VMP1-217ENST00000593168 TPD52L1Q16890 204 aaPredicted RBP14.85□□□□□ -0.03
VMP1-217ENST00000593168 CDKAL1Q5VV42 579 aa14.85□□□□□ -0.03
VMP1-217ENST00000593168 STXBP4Q6ZWJ1 553 aa14.85□□□□□ -0.03
VMP1-217ENST00000593168 ZNF720Q7Z2F6 126 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms