RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 GPBP1Q86WP2 473 aa10.74□□□□□ -0.69
DDX39A-220ENST00000593008 C4orf19Q8IY42 314 aa10.74□□□□□ -0.69
DDX39A-220ENST00000593008 LRRC71Q8N4P6 559 aa10.74□□□□□ -0.69
DDX39A-220ENST00000593008 NEK9Q8TD19 979 aa10.74□□□□□ -0.69
DDX39A-220ENST00000593008 CALML4Q96GE6 196 aa10.74□□□□□ -0.69
DDX39A-220ENST00000593008 MYMKA6NI61 221 aa10.73□□□□□ -0.69
DDX39A-220ENST00000593008 ZNF202O95125 648 aa10.73□□□□□ -0.69
DDX39A-220ENST00000593008 C22orf31O95567 290 aa10.73□□□□□ -0.69
DDX39A-220ENST00000593008 EYA4O95677 639 aa10.73□□□□□ -0.69
DDX39A-220ENST00000593008 GNAT1P11488 350 aa10.73□□□□□ -0.69
DDX39A-220ENST00000593008 RFC2P35250 354 aa10.73□□□□□ -0.69
DDX39A-220ENST00000593008 CLCN3P51790 818 aa10.73□□□□□ -0.69
DDX39A-220ENST00000593008 RABGGTBP53611 331 aa10.73□□□□□ -0.69
DDX39A-220ENST00000593008 PNOCQ13519 176 aa10.73□□□□□ -0.69
DDX39A-220ENST00000593008 CUL4BQ13620 913 aa10.73□□□□□ -0.69
DDX39A-220ENST00000593008 MBTPS1Q14703 1052 aa10.73□□□□□ -0.69
DDX39A-220ENST00000593008 EMC2Q15006 297 aa10.73□□□□□ -0.69
DDX39A-220ENST00000593008 CAMK4Q16566 473 aa10.73□□□□□ -0.69
DDX39A-220ENST00000593008 CSPP1Q1MSJ5 1256 aa10.73□□□□□ -0.69
DDX39A-220ENST00000593008 TCTN1Q2MV58 587 aa10.73□□□□□ -0.69
DDX39A-220ENST00000593008 ZNF697Q5TEC3 545 aa10.73□□□□□ -0.69
DDX39A-220ENST00000593008 RASIP1Q5U651 963 aa10.73□□□□□ -0.69
DDX39A-220ENST00000593008 GPR153Q6NV75 609 aa10.73□□□□□ -0.69
DDX39A-220ENST00000593008 TRAF7Q6Q0C0 670 aa10.73□□□□□ -0.69
DDX39A-220ENST00000593008 PADI6Q6TGC4 694 aa10.73□□□□□ -0.69
DDX39A-220ENST00000593008 KRBA2Q6ZNG9 492 aa10.73□□□□□ -0.69
DDX39A-220ENST00000593008 DYMQ7RTS9 669 aa10.73□□□□□ -0.69
DDX39A-220ENST00000593008 DAW1Q8N136 415 aa10.73□□□□□ -0.69
DDX39A-220ENST00000593008 BSNDQ8WZ55 320 aa10.73□□□□□ -0.69
DDX39A-220ENST00000593008 LARP4BQ92615 738 aaKnown RBP10.73□□□□□ -0.69
DDX39A-220ENST00000593008 HPS3Q969F9 1004 aa10.73□□□□□ -0.69
DDX39A-220ENST00000593008 CEP170P1Q96L14 293 aa10.73□□□□□ -0.69
DDX39A-220ENST00000593008 NACC1Q96RE7 527 aa10.73□□□□□ -0.69
DDX39A-220ENST00000593008 FGFBP2Q9BYJ0 223 aa10.73□□□□□ -0.69
DDX39A-220ENST00000593008 MTIF3Q9H2K0 278 aaKnown RBP10.73□□□□□ -0.69
DDX39A-220ENST00000593008 CYP26B1Q9NR63 512 aa10.73□□□□□ -0.69
DDX39A-220ENST00000593008 CCDC39Q9UFE4 941 aa10.73□□□□□ -0.69
DDX39A-220ENST00000593008 SLC4A7Q9Y6M7 1214 aa10.73□□□□□ -0.69
DDX39A-220ENST00000593008 MYH9P35579 1960 aaKnown RBP10.73□□□□□ -0.69
DDX39A-220ENST00000593008 NRCAMQ92823 1304 aa10.73□□□□□ -0.69
DDX39A-220ENST00000593008 ARHGEF35A5YM69 484 aa10.72□□□□□ -0.69
DDX39A-220ENST00000593008 PFKMP08237 780 aa10.72□□□□□ -0.69
DDX39A-220ENST00000593008 ACTN1P12814 892 aa10.72□□□□□ -0.69
DDX39A-220ENST00000593008 MYOGP15173 224 aa10.72□□□□□ -0.69
DDX39A-220ENST00000593008 CYP11B2P19099 503 aa10.72□□□□□ -0.69
DDX39A-220ENST00000593008 DNAJB2P25686 324 aa10.72□□□□□ -0.69
DDX39A-220ENST00000593008 ADAM17P78536 824 aa10.72□□□□□ -0.69
DDX39A-220ENST00000593008 RBL2Q08999 1139 aa10.72□□□□□ -0.69
DDX39A-220ENST00000593008 TMEM62Q0P6H9 643 aa10.72□□□□□ -0.69
DDX39A-220ENST00000593008 MAPK7Q13164 816 aa10.72□□□□□ -0.69
DDX39A-220ENST00000593008 RINT1Q6NUQ1 792 aa10.72□□□□□ -0.69
DDX39A-220ENST00000593008 TMCO2Q7Z6W1 182 aaPredicted RBP10.72□□□□□ -0.69
DDX39A-220ENST00000593008 KSR1Q8IVT5 923 aa10.72□□□□□ -0.69
DDX39A-220ENST00000593008 ASAP3Q8TDY4 903 aa10.72□□□□□ -0.69
DDX39A-220ENST00000593008 BBXQ8WY36 941 aaPredicted RBP10.72□□□□□ -0.69
DDX39A-220ENST00000593008 TMEM143Q96AN5 459 aa10.72□□□□□ -0.69
DDX39A-220ENST00000593008 PAGE5Q96GU1 130 aa10.72□□□□□ -0.69
DDX39A-220ENST00000593008 REEP2Q9BRK0 252 aa10.72□□□□□ -0.69
DDX39A-220ENST00000593008 KIFC3Q9BVG8 833 aa10.72□□□□□ -0.69
DDX39A-220ENST00000593008 NIFKQ9BYG3 293 aaKnown RBP10.72□□□□□ -0.69
DDX39A-220ENST00000593008 PBX4Q9BYU1 374 aa10.72□□□□□ -0.69
DDX39A-220ENST00000593008 OSBPL7Q9BZF2 842 aa10.72□□□□□ -0.69
DDX39A-220ENST00000593008 FAM49AQ9H0Q0 323 aaPredicted RBP10.72□□□□□ -0.69
DDX39A-220ENST00000593008 TTYH1Q9H313 450 aaPredicted RBP10.72□□□□□ -0.69
DDX39A-220ENST00000593008 MTMR10Q9NXD2 777 aa10.72□□□□□ -0.69
DDX39A-220ENST00000593008 TUBE1Q9UJT0 475 aa10.72□□□□□ -0.69
DDX39A-220ENST00000593008 DNM3Q9UQ16 869 aa10.72□□□□□ -0.69
DDX39A-220ENST00000593008 SFI1A8K8P3 1242 aa10.71□□□□□ -0.69
DDX39A-220ENST00000593008 GOLGA6L22H0YM25 854 aa10.71□□□□□ -0.69
DDX39A-220ENST00000593008 SLFN14P0C7P3 912 aa10.71□□□□□ -0.69
DDX39A-220ENST00000593008 ATP2A2P16615 1042 aaKnown RBP10.71□□□□□ -0.69
DDX39A-220ENST00000593008 POLGP54098 1239 aaPredicted RBP10.71□□□□□ -0.69
DDX39A-220ENST00000593008 SCN5AQ14524 2016 aa10.71□□□□□ -0.69
DDX39A-220ENST00000593008 TRIP12Q14669 1992 aaPredicted RBP10.71□□□□□ -0.69
DDX39A-220ENST00000593008 MTHFD1LQ6UB35 978 aa10.71□□□□□ -0.69
DDX39A-220ENST00000593008 C1orf186Q6ZWK4 172 aa10.71□□□□□ -0.69
DDX39A-220ENST00000593008 LINC01465Q8N7H1 131 aa10.71□□□□□ -0.69
DDX39A-220ENST00000593008 SYT2Q8N9I0 419 aaPredicted RBP10.71□□□□□ -0.69
DDX39A-220ENST00000593008 IQUBQ8NA54 791 aa10.71□□□□□ -0.69
DDX39A-220ENST00000593008 CNNM3Q8NE01 707 aa10.71□□□□□ -0.69
DDX39A-220ENST00000593008 GLIS3Q8NEA6 775 aa10.71□□□□□ -0.69
DDX39A-220ENST00000593008 TIFAQ96CG3 184 aa10.71□□□□□ -0.69
DDX39A-220ENST00000593008 DNAJC19Q96DA6 116 aa10.71□□□□□ -0.69
DDX39A-220ENST00000593008 FAM167AQ96KS9 214 aa10.71□□□□□ -0.69
DDX39A-220ENST00000593008 CCDC43Q96MW1 224 aaKnown RBP10.71□□□□□ -0.69
DDX39A-220ENST00000593008 GUCD1Q96NT3 240 aa10.71□□□□□ -0.69
DDX39A-220ENST00000593008 NT5C3AQ9H0P0 336 aa10.71□□□□□ -0.69
DDX39A-220ENST00000593008 POLR3FQ9H1D9 316 aaPredicted RBP10.71□□□□□ -0.69
DDX39A-220ENST00000593008 SEMA6BQ9H3T3 888 aa10.71□□□□□ -0.69
DDX39A-220ENST00000593008 SUGCTQ9HAC7 445 aa10.71□□□□□ -0.69
DDX39A-220ENST00000593008 ANKEF1Q9NU02 776 aa10.71□□□□□ -0.69
DDX39A-220ENST00000593008 KBTBD4Q9NVX7 518 aa10.71□□□□□ -0.69
DDX39A-220ENST00000593008 TMEM63CQ9P1W3 806 aa10.71□□□□□ -0.69
DDX39A-220ENST00000593008 STK17AQ9UEE5 414 aa10.71□□□□□ -0.69
DDX39A-220ENST00000593008 DBR1Q9UK59 544 aaKnown RBP10.71□□□□□ -0.69
DDX39A-220ENST00000593008 CDH23Q9H251 3354 aa10.71□□□□□ -0.7
DDX39A-220ENST00000593008 ADGRA3Q8IWK6 1321 aa10.7□□□□□ -0.7
DDX39A-220ENST00000593008 HBP1O60381 514 aa10.7□□□□□ -0.7
DDX39A-220ENST00000593008 KINO60870 393 aaKnown RBP10.7□□□□□ -0.7
DDX39A-220ENST00000593008 HIP1RO75146 1068 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms