RNA–Protein interactions for RNA: ENST00000592023.5

ERCC1-213, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-213ENST00000592023 EIF2AK1Q9BQI3 630 aaKnown RBP17.01■□□□□ 0.31
ERCC1-213ENST00000592023 TMEM60Q9H2L4 133 aa17.01■□□□□ 0.31
ERCC1-213ENST00000592023 FOXP1Q9H334 677 aaPredicted RBP17.01■□□□□ 0.31
ERCC1-213ENST00000592023 RGS18Q9NS28 235 aa17.01■□□□□ 0.31
ERCC1-213ENST00000592023 LMCD1Q9NZU5 365 aa17.01■□□□□ 0.31
ERCC1-213ENST00000592023 SUCLA2Q9P2R7 463 aaPredicted RBP17.01■□□□□ 0.31
ERCC1-213ENST00000592023 PCDHB7Q9Y5E2 793 aa17.01■□□□□ 0.31
ERCC1-213ENST00000592023 MRPL42Q9Y6G3 142 aaKnown RBP17.01■□□□□ 0.31
ERCC1-213ENST00000592023 POTEMA6NI47 508 aa17■□□□□ 0.31
ERCC1-213ENST00000592023 C9IYK1 514 aa17■□□□□ 0.31
ERCC1-213ENST00000592023 H3BNC9 293 aa17■□□□□ 0.31
ERCC1-213ENST00000592023 DSC3Q14574 896 aa17■□□□□ 0.31
ERCC1-213ENST00000592023 TJAP1Q5JTD0 557 aa17■□□□□ 0.31
ERCC1-213ENST00000592023 SLC24A5Q71RS6 500 aa17■□□□□ 0.31
ERCC1-213ENST00000592023 RHPN2Q8IUC4 686 aa17■□□□□ 0.31
ERCC1-213ENST00000592023 TPH2Q8IWU9 490 aa17■□□□□ 0.31
ERCC1-213ENST00000592023 ZNF710Q8N1W2 664 aa17■□□□□ 0.31
ERCC1-213ENST00000592023 ATXN2LQ8WWM7 1075 aaKnown RBP17■□□□□ 0.31
ERCC1-213ENST00000592023 SLC7A3Q8WY07 619 aa17■□□□□ 0.31
ERCC1-213ENST00000592023 NLRP4Q96MN2 994 aa17■□□□□ 0.31
ERCC1-213ENST00000592023 TBC1D32Q96NH3 1257 aa17■□□□□ 0.31
ERCC1-213ENST00000592023 MTMR9Q96QG7 549 aa17■□□□□ 0.31
ERCC1-213ENST00000592023 JPH2Q9BR39 696 aaPredicted RBP17■□□□□ 0.31
ERCC1-213ENST00000592023 ZSWIM4Q9H7M6 989 aa17■□□□□ 0.31
ERCC1-213ENST00000592023 RWDD3Q9Y3V2 267 aa17■□□□□ 0.31
ERCC1-213ENST00000592023 UNC80Q8N2C7 3258 aa17■□□□□ 0.31
ERCC1-213ENST00000592023 ATG2AQ2TAZ0 1938 aa17■□□□□ 0.31
ERCC1-213ENST00000592023 PRUNE2Q8WUY3 3088 aa16.99■□□□□ 0.31
ERCC1-213ENST00000592023 A0A087WZ62 844 aa16.99■□□□□ 0.31
ERCC1-213ENST00000592023 CSDE1O75534 798 aaKnown RBP16.99■□□□□ 0.31
ERCC1-213ENST00000592023 CSPG5O95196 566 aa16.99■□□□□ 0.31
ERCC1-213ENST00000592023 BMPR1AP36894 532 aa16.99■□□□□ 0.31
ERCC1-213ENST00000592023 TFF2Q03403 129 aa16.99■□□□□ 0.31
ERCC1-213ENST00000592023 PTPROQ16827 1216 aa16.99■□□□□ 0.31
ERCC1-213ENST00000592023 XKR9Q5GH70 373 aa16.99■□□□□ 0.31
ERCC1-213ENST00000592023 NOSTRINQ8IVI9 506 aa16.99■□□□□ 0.31
ERCC1-213ENST00000592023 KSR1Q8IVT5 923 aa16.99■□□□□ 0.31
ERCC1-213ENST00000592023 NEK9Q8TD19 979 aa16.99■□□□□ 0.31
ERCC1-213ENST00000592023 MRPL38Q96DV4 380 aaKnown RBP16.99■□□□□ 0.31
ERCC1-213ENST00000592023 TMX3Q96JJ7 454 aa16.99■□□□□ 0.31
ERCC1-213ENST00000592023 FDXACB1Q9BRP7 624 aaPredicted RBP16.99■□□□□ 0.31
ERCC1-213ENST00000592023 GCOM2Q9BZD3 368 aaPredicted RBP16.99■□□□□ 0.31
ERCC1-213ENST00000592023 FNDC1Q4ZHG4 1894 aaPredicted RBP16.99■□□□□ 0.31
ERCC1-213ENST00000592023 TBKBP1A7MCY6 615 aa16.98■□□□□ 0.31
ERCC1-213ENST00000592023 C5orf67F2Z3F1 127 aa16.98■□□□□ 0.31
ERCC1-213ENST00000592023 ZBTB39O15060 712 aa16.98■□□□□ 0.31
ERCC1-213ENST00000592023 SLITRK3O94933 977 aa16.98■□□□□ 0.31
ERCC1-213ENST00000592023 OR52Z1P0C646 297 aa16.98■□□□□ 0.31
ERCC1-213ENST00000592023 FGFR1P11362 822 aa16.98■□□□□ 0.31
ERCC1-213ENST00000592023 ZSCAN20P17040 1043 aaPredicted RBP16.98■□□□□ 0.31
ERCC1-213ENST00000592023 RFC5P40937 340 aa16.98■□□□□ 0.31
ERCC1-213ENST00000592023 MRPS5P82675 430 aaKnown RBP16.98■□□□□ 0.31
ERCC1-213ENST00000592023 NBR1Q14596 966 aa16.98■□□□□ 0.31
ERCC1-213ENST00000592023 EMC2Q15006 297 aa16.98■□□□□ 0.31
ERCC1-213ENST00000592023 ZNF174Q15697 407 aa16.98■□□□□ 0.31
ERCC1-213ENST00000592023 TTC38Q5R3I4 469 aa16.98■□□□□ 0.31
ERCC1-213ENST00000592023 FAM43BQ6ZT52 329 aaPredicted RBP16.98■□□□□ 0.31
ERCC1-213ENST00000592023 OTUD6AQ7L8S5 288 aa16.98■□□□□ 0.31
ERCC1-213ENST00000592023 ZNF410Q86VK4 478 aa16.98■□□□□ 0.31
ERCC1-213ENST00000592023 CLP1Q92989 425 aaKnown RBP16.98■□□□□ 0.31
ERCC1-213ENST00000592023 TMEM143Q96AN5 459 aa16.98■□□□□ 0.31
ERCC1-213ENST00000592023 CCDC43Q96MW1 224 aaKnown RBP16.98■□□□□ 0.31
ERCC1-213ENST00000592023 ASB2Q96Q27 587 aa16.98■□□□□ 0.31
ERCC1-213ENST00000592023 C11orf84Q9BUA3 381 aaPredicted RBP16.98■□□□□ 0.31
ERCC1-213ENST00000592023 DHX33Q9H6R0 707 aaKnown RBP16.98■□□□□ 0.31
ERCC1-213ENST00000592023 ATP6V0A4Q9HBG4 840 aa16.98■□□□□ 0.31
ERCC1-213ENST00000592023 TMEM161AQ9NX61 479 aa16.98■□□□□ 0.31
ERCC1-213ENST00000592023 NOL7Q9UMY1 257 aaKnown RBP16.98■□□□□ 0.31
ERCC1-213ENST00000592023 PPME1Q9Y570 386 aa16.98■□□□□ 0.31
ERCC1-213ENST00000592023 SFPQP23246 707 aaKnown RBP eCLIP16.97■□□□□ 0.31
ERCC1-213ENST00000592023 TIGD5Q53EQ6 642 aa16.97■□□□□ 0.31
ERCC1-213ENST00000592023 FAM102BQ5T8I3 360 aa16.97■□□□□ 0.31
ERCC1-213ENST00000592023 RNF169Q8NCN4 708 aa16.97■□□□□ 0.31
ERCC1-213ENST00000592023 PSPC1Q8WXF1 523 aaKnown RBP16.97■□□□□ 0.31
ERCC1-213ENST00000592023 RNF216Q9NWF9 866 aaPredicted RBP16.97■□□□□ 0.31
ERCC1-213ENST00000592023 HCSTQ9UBK5 93 aa16.97■□□□□ 0.31
ERCC1-213ENST00000592023 KIF3AQ9Y496 699 aa16.97■□□□□ 0.31
ERCC1-213ENST00000592023 COL4A3BPQ9Y5P4 624 aa16.97■□□□□ 0.31
ERCC1-213ENST00000592023 GRM6O15303 877 aa16.96■□□□□ 0.31
ERCC1-213ENST00000592023 LYPLA2O95372 231 aa16.96■□□□□ 0.31
ERCC1-213ENST00000592023 RB1P06400 928 aa16.96■□□□□ 0.31
ERCC1-213ENST00000592023 CDC42EP1Q00587 391 aa16.96■□□□□ 0.31
ERCC1-213ENST00000592023 ORC2Q13416 577 aaPredicted RBP16.96■□□□□ 0.31
ERCC1-213ENST00000592023 SPOUT1Q5T280 376 aaKnown RBP16.96■□□□□ 0.31
ERCC1-213ENST00000592023 IL27Q8NEV9 243 aa16.96■□□□□ 0.31
ERCC1-213ENST00000592023 MTRQ99707 1265 aa16.96■□□□□ 0.31
ERCC1-213ENST00000592023 HSD17B14Q9BPX1 270 aa16.96■□□□□ 0.31
ERCC1-213ENST00000592023 ELAC1Q9H777 363 aaKnown RBP16.96■□□□□ 0.31
ERCC1-213ENST00000592023 COG5Q9UP83 839 aa16.96■□□□□ 0.31
ERCC1-213ENST00000592023 PIN4Q9Y237 131 aaKnown RBP16.96■□□□□ 0.31
ERCC1-213ENST00000592023 GAS2O43903 313 aaKnown RBP16.95■□□□□ 0.3
ERCC1-213ENST00000592023 TECP42680 631 aa16.95■□□□□ 0.3
ERCC1-213ENST00000592023 TRAPPC10P48553 1259 aa16.95■□□□□ 0.3
ERCC1-213ENST00000592023 MCM2P49736 904 aa16.95■□□□□ 0.3
ERCC1-213ENST00000592023 KCNQ1P51787 676 aa16.95■□□□□ 0.3
ERCC1-213ENST00000592023 CATSPER4Q7RTX7 472 aa16.95■□□□□ 0.3
ERCC1-213ENST00000592023 ECHDC2Q86YB7 292 aa16.95■□□□□ 0.3
ERCC1-213ENST00000592023 EXOC8Q8IYI6 725 aa16.95■□□□□ 0.3
ERCC1-213ENST00000592023 PIGOQ8TEQ8 1089 aa16.95■□□□□ 0.3
ERCC1-213ENST00000592023 TCP11Q8WWU5 503 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms