RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 FOSL2P15408 326 aa11.23□□□□□ -0.61
BRCA1-227ENST00000591849 IGFBP4P22692 258 aa11.23□□□□□ -0.61
BRCA1-227ENST00000591849 EIF4BP23588 611 aaKnown RBP11.23□□□□□ -0.61
BRCA1-227ENST00000591849 FXR2P51116 673 aaKnown RBP eCLIP11.23□□□□□ -0.61
BRCA1-227ENST00000591849 GPC3P51654 580 aa11.23□□□□□ -0.61
BRCA1-227ENST00000591849 PDIA5Q14554 519 aa11.23□□□□□ -0.61
BRCA1-227ENST00000591849 EMC2Q15006 297 aa11.23□□□□□ -0.61
BRCA1-227ENST00000591849 ZRSR1Q15695 479 aaKnown RBP11.23□□□□□ -0.61
BRCA1-227ENST00000591849 CATSPER3Q86XQ3 398 aa11.23□□□□□ -0.61
BRCA1-227ENST00000591849 ZNF579Q8NAF0 562 aaKnown RBP11.23□□□□□ -0.61
BRCA1-227ENST00000591849 MYLIPQ8WY64 445 aa11.23□□□□□ -0.61
BRCA1-227ENST00000591849 ARNTL2Q8WYA1 636 aa11.23□□□□□ -0.61
BRCA1-227ENST00000591849 TOP1MTQ969P6 601 aa11.23□□□□□ -0.61
BRCA1-227ENST00000591849 NLRP4Q96MN2 994 aa11.23□□□□□ -0.61
BRCA1-227ENST00000591849 MTRQ99707 1265 aa11.23□□□□□ -0.61
BRCA1-227ENST00000591849 ADAM2Q99965 735 aa11.23□□□□□ -0.61
BRCA1-227ENST00000591849 POLR3CQ9BUI4 534 aaPredicted RBP11.23□□□□□ -0.61
BRCA1-227ENST00000591849 PRDM12Q9H4Q4 367 aa11.23□□□□□ -0.61
BRCA1-227ENST00000591849 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.23□□□□□ -0.61
BRCA1-227ENST00000591849 PCDHB7Q9Y5E2 793 aa11.23□□□□□ -0.61
BRCA1-227ENST00000591849 A0A087WZ62 844 aa11.22□□□□□ -0.61
BRCA1-227ENST00000591849 ARHGEF35A5YM69 484 aa11.22□□□□□ -0.61
BRCA1-227ENST00000591849 RBAK-RBAKDNI3L0D1 243 aa11.22□□□□□ -0.61
BRCA1-227ENST00000591849 ZBTB39O15060 712 aa11.22□□□□□ -0.61
BRCA1-227ENST00000591849 MED24O75448 989 aa11.22□□□□□ -0.61
BRCA1-227ENST00000591849 DGAT1O75907 488 aa11.22□□□□□ -0.61
BRCA1-227ENST00000591849 DARSP14868 501 aaKnown RBP11.22□□□□□ -0.61
BRCA1-227ENST00000591849 SYT1P21579 422 aa11.22□□□□□ -0.61
BRCA1-227ENST00000591849 SFPQP23246 707 aaKnown RBP eCLIP11.22□□□□□ -0.61
BRCA1-227ENST00000591849 RPA1P27694 616 aa11.22□□□□□ -0.61
BRCA1-227ENST00000591849 PRPHP41219 470 aa11.22□□□□□ -0.61
BRCA1-227ENST00000591849 DRP2Q13474 957 aa11.22□□□□□ -0.61
BRCA1-227ENST00000591849 SCN5AQ14524 2016 aa11.22□□□□□ -0.61
BRCA1-227ENST00000591849 MAEAQ7L5Y9 396 aa11.22□□□□□ -0.61
BRCA1-227ENST00000591849 ZNF410Q86VK4 478 aa11.22□□□□□ -0.61
BRCA1-227ENST00000591849 FIBCD1Q8N539 461 aa11.22□□□□□ -0.61
BRCA1-227ENST00000591849 LINC01465Q8N7H1 131 aa11.22□□□□□ -0.61
BRCA1-227ENST00000591849 C4orf32Q8N8J7 132 aa11.22□□□□□ -0.61
BRCA1-227ENST00000591849 SPRYD3Q8NCJ5 442 aa11.22□□□□□ -0.61
BRCA1-227ENST00000591849 SNX29Q8TEQ0 813 aa11.22□□□□□ -0.61
BRCA1-227ENST00000591849 TMEM40Q8WWA1 233 aa11.22□□□□□ -0.61
BRCA1-227ENST00000591849 PRPF31Q8WWY3 499 aaKnown RBP11.22□□□□□ -0.61
BRCA1-227ENST00000591849 CDK5RAP3Q96JB5 506 aa11.22□□□□□ -0.61
BRCA1-227ENST00000591849 FDXACB1Q9BRP7 624 aaPredicted RBP11.22□□□□□ -0.61
BRCA1-227ENST00000591849 ADAMTS10Q9H324 1103 aa11.22□□□□□ -0.61
BRCA1-227ENST00000591849 DHX33Q9H6R0 707 aaKnown RBP11.22□□□□□ -0.61
BRCA1-227ENST00000591849 ATP6V0A4Q9HBG4 840 aa11.22□□□□□ -0.61
BRCA1-227ENST00000591849 ERVK-5Q9HDB9 667 aa11.22□□□□□ -0.61
BRCA1-227ENST00000591849 C1orf112Q9NSG2 853 aa11.22□□□□□ -0.61
BRCA1-227ENST00000591849 KIAA1024Q9UPX6 916 aa11.22□□□□□ -0.61
BRCA1-227ENST00000591849 COL4A3BPQ9Y5P4 624 aa11.22□□□□□ -0.61
BRCA1-227ENST00000591849 IGKV6-21A0A0C4DH24 114 aa11.21□□□□□ -0.61
BRCA1-227ENST00000591849 VWA3AA6NCI4 1184 aa11.21□□□□□ -0.61
BRCA1-227ENST00000591849 GTPBP6O43824 516 aaPredicted RBP11.21□□□□□ -0.61
BRCA1-227ENST00000591849 USO1O60763 962 aaKnown RBP11.21□□□□□ -0.61
BRCA1-227ENST00000591849 SPATA31C1P0DKV0 1188 aa11.21□□□□□ -0.61
BRCA1-227ENST00000591849 MUTP22033 750 aa11.21□□□□□ -0.61
BRCA1-227ENST00000591849 FGFR4P22455 802 aa11.21□□□□□ -0.61
BRCA1-227ENST00000591849 TAP1Q03518 808 aa11.21□□□□□ -0.61
BRCA1-227ENST00000591849 NCBP1Q09161 790 aaKnown RBP11.21□□□□□ -0.61
BRCA1-227ENST00000591849 LAMTOR4Q0VGL1 99 aa11.21□□□□□ -0.61
BRCA1-227ENST00000591849 MKRN4PQ13434 485 aaPredicted RBP11.21□□□□□ -0.61
BRCA1-227ENST00000591849 TFDP1Q14186 410 aa11.21□□□□□ -0.61
BRCA1-227ENST00000591849 MXD4Q14582 209 aaPredicted RBP11.21□□□□□ -0.61
BRCA1-227ENST00000591849 POTEGQ6S5H5 508 aa11.21□□□□□ -0.61
BRCA1-227ENST00000591849 CATSPER4Q7RTX7 472 aa11.21□□□□□ -0.61
BRCA1-227ENST00000591849 FAM228AQ86W67 206 aa11.21□□□□□ -0.61
BRCA1-227ENST00000591849 NPAS4Q8IUM7 802 aa11.21□□□□□ -0.61
BRCA1-227ENST00000591849 KSR1Q8IVT5 923 aa11.21□□□□□ -0.61
BRCA1-227ENST00000591849 RNF169Q8NCN4 708 aa11.21□□□□□ -0.61
BRCA1-227ENST00000591849 RASSF8Q8NHQ8 419 aa11.21□□□□□ -0.61
BRCA1-227ENST00000591849 MAFAQ8NHW3 353 aaPredicted RBP11.21□□□□□ -0.61
BRCA1-227ENST00000591849 TGS1Q96RS0 853 aaKnown RBP11.21□□□□□ -0.61
BRCA1-227ENST00000591849 CEP89Q96ST8 783 aa11.21□□□□□ -0.61
BRCA1-227ENST00000591849 TSPYL2Q9H2G4 693 aaPredicted RBP11.21□□□□□ -0.61
BRCA1-227ENST00000591849 MTUS1Q9ULD2 1270 aa11.21□□□□□ -0.61
BRCA1-227ENST00000591849 DNM3Q9UQ16 869 aa11.21□□□□□ -0.61
BRCA1-227ENST00000591849 MUC3AQ02505 3323 aa11.2□□□□□ -0.62
BRCA1-227ENST00000591849 LCHNA4D1U4 455 aa11.2□□□□□ -0.62
BRCA1-227ENST00000591849 STX6O43752 255 aa11.2□□□□□ -0.62
BRCA1-227ENST00000591849 CSDE1O75534 798 aaKnown RBP11.2□□□□□ -0.62
BRCA1-227ENST00000591849 PHKA2P46019 1235 aa11.2□□□□□ -0.62
BRCA1-227ENST00000591849 SARSP49591 514 aaKnown RBP11.2□□□□□ -0.62
BRCA1-227ENST00000591849 RARRES1P49788 294 aa11.2□□□□□ -0.62
BRCA1-227ENST00000591849 ATP2C1P98194 919 aaPredicted RBP11.2□□□□□ -0.62
BRCA1-227ENST00000591849 BTG3Q14201 252 aaPredicted RBP11.2□□□□□ -0.62
BRCA1-227ENST00000591849 SF3A1Q15459 793 aaKnown RBP11.2□□□□□ -0.62
BRCA1-227ENST00000591849 SPOUT1Q5T280 376 aaKnown RBP11.2□□□□□ -0.62
BRCA1-227ENST00000591849 FAM102BQ5T8I3 360 aa11.2□□□□□ -0.62
BRCA1-227ENST00000591849 ARL6IP4Q66PJ3 421 aaKnown RBP11.2□□□□□ -0.62
BRCA1-227ENST00000591849 SLC24A5Q71RS6 500 aa11.2□□□□□ -0.62
BRCA1-227ENST00000591849 RTN4RL1Q86UN2 441 aaPredicted RBP11.2□□□□□ -0.62
BRCA1-227ENST00000591849 MICALL1Q8N3F8 863 aa11.2□□□□□ -0.62
BRCA1-227ENST00000591849 RNF149Q8NC42 400 aa11.2□□□□□ -0.62
BRCA1-227ENST00000591849 MCPH1Q8NEM0 835 aa11.2□□□□□ -0.62
BRCA1-227ENST00000591849 PPM1EQ8WY54 764 aa11.2□□□□□ -0.62
BRCA1-227ENST00000591849 COL25A1Q9BXS0 654 aaPredicted RBP11.2□□□□□ -0.62
BRCA1-227ENST00000591849 TMX1Q9H3N1 280 aa11.2□□□□□ -0.62
BRCA1-227ENST00000591849 ZSCAN16Q9H4T2 348 aaPredicted RBP11.2□□□□□ -0.62
BRCA1-227ENST00000591849 RGS18Q9NS28 235 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms