RNA–Protein interactions for RNA: ENST00000591661.1

MBD1-226, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 3

Gene MBD1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-226ENST00000591661 NLRP7Q8WX94 980 aa16.04■□□□□ 0.16
MBD1-226ENST00000591661 PSPC1Q8WXF1 523 aaKnown RBP16.04■□□□□ 0.16
MBD1-226ENST00000591661 LINC01599Q8WXQ3 324 aa16.04■□□□□ 0.16
MBD1-226ENST00000591661 TOP1MTQ969P6 601 aa16.04■□□□□ 0.16
MBD1-226ENST00000591661 TMEM143Q96AN5 459 aa16.04■□□□□ 0.16
MBD1-226ENST00000591661 CCDC43Q96MW1 224 aaKnown RBP16.04■□□□□ 0.16
MBD1-226ENST00000591661 MTRQ99707 1265 aa16.04■□□□□ 0.16
MBD1-226ENST00000591661 MMTAG2Q9BU76 263 aaKnown RBP16.04■□□□□ 0.16
MBD1-226ENST00000591661 TSPYL2Q9H2G4 693 aaPredicted RBP16.04■□□□□ 0.16
MBD1-226ENST00000591661 TTYH1Q9H313 450 aaPredicted RBP16.04■□□□□ 0.16
MBD1-226ENST00000591661 TMX1Q9H3N1 280 aa16.04■□□□□ 0.16
MBD1-226ENST00000591661 SEMA6BQ9H3T3 888 aa16.04■□□□□ 0.16
MBD1-226ENST00000591661 ATP6V0A4Q9HBG4 840 aa16.04■□□□□ 0.16
MBD1-226ENST00000591661 ST3GAL5Q9UNP4 418 aa16.04■□□□□ 0.16
MBD1-226ENST00000591661 COL4A3BPQ9Y5P4 624 aa16.04■□□□□ 0.16
MBD1-226ENST00000591661 TRANK1O15050 2925 aa16.03■□□□□ 0.16
MBD1-226ENST00000591661 ASAP2O43150 1006 aa16.03■□□□□ 0.16
MBD1-226ENST00000591661 MYOGP15173 224 aa16.03■□□□□ 0.16
MBD1-226ENST00000591661 NFX1Q12986 1120 aaKnown RBP16.03■□□□□ 0.16
MBD1-226ENST00000591661 PTPAQ15257 358 aa16.03■□□□□ 0.16
MBD1-226ENST00000591661 HYIQ5T013 277 aa16.03■□□□□ 0.16
MBD1-226ENST00000591661 FAM173BQ6P4H8 233 aa16.03■□□□□ 0.16
MBD1-226ENST00000591661 TMCO2Q7Z6W1 182 aaPredicted RBP16.03■□□□□ 0.16
MBD1-226ENST00000591661 RTN4RL1Q86UN2 441 aaPredicted RBP16.03■□□□□ 0.16
MBD1-226ENST00000591661 RHPN2Q8IUC4 686 aa16.03■□□□□ 0.16
MBD1-226ENST00000591661 KCTD17Q8N5Z5 321 aa16.03■□□□□ 0.16
MBD1-226ENST00000591661 PRPF31Q8WWY3 499 aaKnown RBP16.03■□□□□ 0.16
MBD1-226ENST00000591661 AK8Q96MA6 479 aa16.03■□□□□ 0.16
MBD1-226ENST00000591661 SCLT1Q96NL6 688 aa16.03■□□□□ 0.16
MBD1-226ENST00000591661 RAD9AQ99638 391 aa16.03■□□□□ 0.16
MBD1-226ENST00000591661 GCOM2Q9BZD3 368 aaPredicted RBP16.03■□□□□ 0.16
MBD1-226ENST00000591661 NKX2-4Q9H2Z4 354 aa16.03■□□□□ 0.16
MBD1-226ENST00000591661 CLIC4Q9Y696 253 aa16.03■□□□□ 0.16
MBD1-226ENST00000591661 MORC2Q9Y6X9 1032 aaPredicted RBP16.03■□□□□ 0.16
MBD1-226ENST00000591661 A0A087WWV3 80 aa16.02■□□□□ 0.16
MBD1-226ENST00000591661 A0A087WZ62 844 aa16.02■□□□□ 0.16
MBD1-226ENST00000591661 TLL1O43897 1013 aa16.02■□□□□ 0.16
MBD1-226ENST00000591661 CDC25AP30304 524 aa16.02■□□□□ 0.16
MBD1-226ENST00000591661 HTRA4P83105 476 aaPredicted RBP16.02■□□□□ 0.16
MBD1-226ENST00000591661 ZNF668Q96K58 619 aaPredicted RBP16.02■□□□□ 0.16
MBD1-226ENST00000591661 FDXACB1Q9BRP7 624 aaPredicted RBP16.02■□□□□ 0.16
MBD1-226ENST00000591661 ZBED2Q9BTP6 218 aa16.02■□□□□ 0.16
MBD1-226ENST00000591661 INO80BQ9C086 356 aaPredicted RBP16.02■□□□□ 0.16
MBD1-226ENST00000591661 ZNF576Q9H609 170 aa16.02■□□□□ 0.16
MBD1-226ENST00000591661 SLC28A3Q9HAS3 691 aa16.02■□□□□ 0.16
MBD1-226ENST00000591661 BMP2KQ9NSY1 1161 aaPredicted RBP16.02■□□□□ 0.16
MBD1-226ENST00000591661 DDX19AQ9NUU7 478 aaKnown RBP16.02■□□□□ 0.16
MBD1-226ENST00000591661 MTMR10Q9NXD2 777 aa16.02■□□□□ 0.16
MBD1-226ENST00000591661 KIAA1024Q9UPX6 916 aa16.02■□□□□ 0.16
MBD1-226ENST00000591661 ARHGEF35A5YM69 484 aa16.01■□□□□ 0.15
MBD1-226ENST00000591661 SLC26A4O43511 780 aa16.01■□□□□ 0.15
MBD1-226ENST00000591661 MGEA5O60502 916 aa16.01■□□□□ 0.15
MBD1-226ENST00000591661 USO1O60763 962 aaKnown RBP16.01■□□□□ 0.15
MBD1-226ENST00000591661 CA3P07451 260 aa16.01■□□□□ 0.15
MBD1-226ENST00000591661 ARL2P36404 184 aa16.01■□□□□ 0.15
MBD1-226ENST00000591661 LONP1P36776 959 aaKnown RBP16.01■□□□□ 0.15
MBD1-226ENST00000591661 LAMTOR4Q0VGL1 99 aa16.01■□□□□ 0.15
MBD1-226ENST00000591661 DSC3Q14574 896 aa16.01■□□□□ 0.15
MBD1-226ENST00000591661 MXD4Q14582 209 aaPredicted RBP16.01■□□□□ 0.15
MBD1-226ENST00000591661 PADI6Q6TGC4 694 aa16.01■□□□□ 0.15
MBD1-226ENST00000591661 KSR1Q8IVT5 923 aa16.01■□□□□ 0.15
MBD1-226ENST00000591661 CRIPAKQ8N1N5 446 aa16.01■□□□□ 0.15
MBD1-226ENST00000591661 MCPH1Q8NEM0 835 aa16.01■□□□□ 0.15
MBD1-226ENST00000591661 NLRP4Q96MN2 994 aa16.01■□□□□ 0.15
MBD1-226ENST00000591661 USP28Q96RU2 1077 aa16.01■□□□□ 0.15
MBD1-226ENST00000591661 NT5C3AQ9H0P0 336 aa16.01■□□□□ 0.15
MBD1-226ENST00000591661 IFT122Q9HBG6 1241 aa16.01■□□□□ 0.15
MBD1-226ENST00000591661 INSL6Q9Y581 213 aa16.01■□□□□ 0.15
MBD1-226ENST00000591661 PTPRSQ13332 1948 aa16.01■□□□□ 0.15
MBD1-226ENST00000591661 EYSQ5T1H1 3165 aa16.01■□□□□ 0.15
MBD1-226ENST00000591661 SLC34A2O95436 690 aa16■□□□□ 0.15
MBD1-226ENST00000591661 ZSCAN22P10073 491 aaPredicted RBP16■□□□□ 0.15
MBD1-226ENST00000591661 CYP11B2P19099 503 aa16■□□□□ 0.15
MBD1-226ENST00000591661 SFPQP23246 707 aaKnown RBP eCLIP16■□□□□ 0.15
MBD1-226ENST00000591661 POU5F1BQ06416 359 aa16■□□□□ 0.15
MBD1-226ENST00000591661 PPP2R2DQ66LE6 453 aa16■□□□□ 0.15
MBD1-226ENST00000591661 SRGAP1Q7Z6B7 1085 aa16■□□□□ 0.15
MBD1-226ENST00000591661 IFNLR1Q8IU57 520 aaPredicted RBP16■□□□□ 0.15
MBD1-226ENST00000591661 SPRYD3Q8NCJ5 442 aa16■□□□□ 0.15
MBD1-226ENST00000591661 SP7Q8TDD2 431 aaPredicted RBP16■□□□□ 0.15
MBD1-226ENST00000591661 BHMT2Q9H2M3 363 aa16■□□□□ 0.15
MBD1-226ENST00000591661 RGS18Q9NS28 235 aa16■□□□□ 0.15
MBD1-226ENST00000591661 C1orf112Q9NSG2 853 aa16■□□□□ 0.15
MBD1-226ENST00000591661 DNM3Q9UQ16 869 aa16■□□□□ 0.15
MBD1-226ENST00000591661 ARID2Q68CP9 1835 aa16■□□□□ 0.15
MBD1-226ENST00000591661 TTC3P53804 2025 aa15.99■□□□□ 0.15
MBD1-226ENST00000591661 DENND3A2RUS2 1198 aa15.99■□□□□ 0.15
MBD1-226ENST00000591661 LCHNA4D1U4 455 aa15.99■□□□□ 0.15
MBD1-226ENST00000591661 C9IYK1 514 aa15.99■□□□□ 0.15
MBD1-226ENST00000591661 UPP2O95045 317 aa15.99■□□□□ 0.15
MBD1-226ENST00000591661 EYA4O95677 639 aa15.99■□□□□ 0.15
MBD1-226ENST00000591661 F13A1P00488 732 aa15.99■□□□□ 0.15
MBD1-226ENST00000591661 NASPP49321 788 aaPredicted RBP15.99■□□□□ 0.15
MBD1-226ENST00000591661 SARSP49591 514 aaKnown RBP15.99■□□□□ 0.15
MBD1-226ENST00000591661 TAP1Q03518 808 aa15.99■□□□□ 0.15
MBD1-226ENST00000591661 GRIN1Q05586 938 aa15.99■□□□□ 0.15
MBD1-226ENST00000591661 BECN1Q14457 450 aa15.99■□□□□ 0.15
MBD1-226ENST00000591661 TMEM119Q4V9L6 283 aa15.99■□□□□ 0.15
MBD1-226ENST00000591661 FAM117BQ6P1L5 589 aa15.99■□□□□ 0.15
MBD1-226ENST00000591661 SLC24A5Q71RS6 500 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms