RNA–Protein interactions for RNA: ENST00000591275.5

DDX39A-216, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-216ENST00000591275 C2orf71A6NGG8 1288 aa18.05■□□□□ 0.48
DDX39A-216ENST00000591275 ASGR2P07307 311 aa18.05■□□□□ 0.48
DDX39A-216ENST00000591275 ZSCAN20P17040 1043 aaPredicted RBP18.05■□□□□ 0.48
DDX39A-216ENST00000591275 CLK2P49760 499 aaKnown RBP18.05■□□□□ 0.48
DDX39A-216ENST00000591275 FUT2Q10981 343 aa18.05■□□□□ 0.48
DDX39A-216ENST00000591275 SMC1AQ14683 1233 aaKnown RBP18.05■□□□□ 0.48
DDX39A-216ENST00000591275 CLLU1OSQ5K130 101 aa18.05■□□□□ 0.48
DDX39A-216ENST00000591275 APOA5Q6Q788 366 aa18.05■□□□□ 0.48
DDX39A-216ENST00000591275 UBALD2Q8IYN6 164 aa18.05■□□□□ 0.48
DDX39A-216ENST00000591275 LRRC71Q8N4P6 559 aa18.05■□□□□ 0.48
DDX39A-216ENST00000591275 MRPL43Q8N983 215 aaKnown RBP18.05■□□□□ 0.48
DDX39A-216ENST00000591275 TCEANC2Q96MN5 208 aa18.05■□□□□ 0.48
DDX39A-216ENST00000591275 ZNF577Q9BSK1 485 aa18.05■□□□□ 0.48
DDX39A-216ENST00000591275 ADAM7Q9H2U9 754 aa18.05■□□□□ 0.48
DDX39A-216ENST00000591275 RBM28Q9NW13 759 aaKnown RBP18.05■□□□□ 0.48
DDX39A-216ENST00000591275 MAFBQ9Y5Q3 323 aaPredicted RBP18.05■□□□□ 0.48
DDX39A-216ENST00000591275 NT5C1B-RDH14C9J2C7 533 aa18.04■□□□□ 0.48
DDX39A-216ENST00000591275 CLASP2O75122 1294 aaKnown RBP18.04■□□□□ 0.48
DDX39A-216ENST00000591275 ITIH3Q06033 890 aa18.04■□□□□ 0.48
DDX39A-216ENST00000591275 RTN1Q16799 776 aa18.04■□□□□ 0.48
DDX39A-216ENST00000591275 RARS2Q5T160 578 aaKnown RBP18.04■□□□□ 0.48
DDX39A-216ENST00000591275 EFCAB12Q6NXP0 572 aa18.04■□□□□ 0.48
DDX39A-216ENST00000591275 KANK3Q6NY19 840 aa18.04■□□□□ 0.48
DDX39A-216ENST00000591275 SLC39A11Q8N1S5 342 aa18.04■□□□□ 0.48
DDX39A-216ENST00000591275 C12orf76Q8N812 135 aaPredicted RBP18.04■□□□□ 0.48
DDX39A-216ENST00000591275 HELQQ8TDG4 1101 aa18.04■□□□□ 0.48
DDX39A-216ENST00000591275 NECTIN4Q96NY8 510 aa18.04■□□□□ 0.48
DDX39A-216ENST00000591275 ADAMTS10Q9H324 1103 aa18.04■□□□□ 0.48
DDX39A-216ENST00000591275 BARHL2Q9NY43 387 aa18.04■□□□□ 0.48
DDX39A-216ENST00000591275 GABBR1Q9UBS5 961 aa18.04■□□□□ 0.48
DDX39A-216ENST00000591275 PROB1E7EW31 1015 aa18.03■□□□□ 0.48
DDX39A-216ENST00000591275 ADAMTS3O15072 1205 aa18.03■□□□□ 0.48
DDX39A-216ENST00000591275 FGFR4P22455 802 aa18.03■□□□□ 0.48
DDX39A-216ENST00000591275 METAP2P50579 478 aaKnown RBP eCLIP18.03■□□□□ 0.48
DDX39A-216ENST00000591275 NUBP1P53384 320 aa18.03■□□□□ 0.48
DDX39A-216ENST00000591275 NECTIN1Q15223 517 aa18.03■□□□□ 0.48
DDX39A-216ENST00000591275 MAP7D2Q96T17 732 aa18.03■□□□□ 0.48
DDX39A-216ENST00000591275 LIMD1Q9UGP4 676 aa18.03■□□□□ 0.48
DDX39A-216ENST00000591275 TCEAL9Q9UHQ7 104 aa18.03■□□□□ 0.48
DDX39A-216ENST00000591275 BRPF3Q9ULD4 1205 aa18.03■□□□□ 0.48
DDX39A-216ENST00000591275 DMDP11532 3685 aa18.03■□□□□ 0.48
DDX39A-216ENST00000591275 PRR23AA6NEV1 266 aa18.02■□□□□ 0.48
DDX39A-216ENST00000591275 ZBTB43O43298 467 aa18.02■□□□□ 0.48
DDX39A-216ENST00000591275 CXCL14O95715 111 aa18.02■□□□□ 0.48
DDX39A-216ENST00000591275 PSAPP07602 524 aa18.02■□□□□ 0.48
DDX39A-216ENST00000591275 EIF4BP23588 611 aaKnown RBP18.02■□□□□ 0.48
DDX39A-216ENST00000591275 MTHFRP42898 656 aa18.02■□□□□ 0.48
DDX39A-216ENST00000591275 ZNF746Q6NUN9 644 aaPredicted RBP18.02■□□□□ 0.48
DDX39A-216ENST00000591275 TEX2Q8IWB9 1127 aa18.02■□□□□ 0.48
DDX39A-216ENST00000591275 AUTS2Q8WXX7 1259 aa18.02■□□□□ 0.48
DDX39A-216ENST00000591275 SCLT1Q96NL6 688 aa18.02■□□□□ 0.48
DDX39A-216ENST00000591275 GLT8D2Q9H1C3 349 aa18.02■□□□□ 0.48
DDX39A-216ENST00000591275 TBC1D22BQ9NU19 505 aa18.02■□□□□ 0.48
DDX39A-216ENST00000591275 CEP131Q9UPN4 1083 aa18.02■□□□□ 0.48
DDX39A-216ENST00000591275 SAMM50Q9Y512 469 aa18.02■□□□□ 0.48
DDX39A-216ENST00000591275 PCDHA10Q9Y5I2 948 aa18.02■□□□□ 0.48
DDX39A-216ENST00000591275 GOLGA8AA7E2F4 631 aa18.01■□□□□ 0.47
DDX39A-216ENST00000591275 GOLGA8BA8MQT2 603 aa18.01■□□□□ 0.47
DDX39A-216ENST00000591275 hCG_1984214I3L0E3 225 aa18.01■□□□□ 0.47
DDX39A-216ENST00000591275 MAGEB2O15479 319 aa18.01■□□□□ 0.47
DDX39A-216ENST00000591275 TMOD1P28289 359 aa18.01■□□□□ 0.47
DDX39A-216ENST00000591275 BCAR1P56945 870 aa18.01■□□□□ 0.47
DDX39A-216ENST00000591275 ASTLQ6HA08 431 aaPredicted RBP18.01■□□□□ 0.47
DDX39A-216ENST00000591275 VPS52Q8N1B4 723 aa18.01■□□□□ 0.47
DDX39A-216ENST00000591275 LINC01465Q8N7H1 131 aa18.01■□□□□ 0.47
DDX39A-216ENST00000591275 ZNF713Q8N859 430 aaPredicted RBP18.01■□□□□ 0.47
DDX39A-216ENST00000591275 TDRD5Q8NAT2 981 aaKnown RBP18.01■□□□□ 0.47
DDX39A-216ENST00000591275 FEZF2Q8TBJ5 459 aa18.01■□□□□ 0.47
DDX39A-216ENST00000591275 CRYGNQ8WXF5 182 aa18.01■□□□□ 0.47
DDX39A-216ENST00000591275 ESYT1Q9BSJ8 1104 aa18.01■□□□□ 0.47
DDX39A-216ENST00000591275 MFSD1Q9H3U5 465 aa18.01■□□□□ 0.47
DDX39A-216ENST00000591275 ANO2Q9NQ90 1003 aa18.01■□□□□ 0.47
DDX39A-216ENST00000591275 WDR81Q562E7 1941 aa18.01■□□□□ 0.47
DDX39A-216ENST00000591275 A0A0U1RQF3 1178 aa18■□□□□ 0.47
DDX39A-216ENST00000591275 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18■□□□□ 0.47
DDX39A-216ENST00000591275 CSDE1O75534 798 aaKnown RBP18■□□□□ 0.47
DDX39A-216ENST00000591275 CYP3A4P08684 503 aa18■□□□□ 0.47
DDX39A-216ENST00000591275 EPCAMP16422 314 aa18■□□□□ 0.47
DDX39A-216ENST00000591275 NBL1P41271 181 aa18■□□□□ 0.47
DDX39A-216ENST00000591275 ALDH7A1P49419 539 aaKnown RBP18■□□□□ 0.47
DDX39A-216ENST00000591275 GPC3P51654 580 aa18■□□□□ 0.47
DDX39A-216ENST00000591275 PRR16Q569H4 304 aa18■□□□□ 0.47
DDX39A-216ENST00000591275 FRMD5Q7Z6J6 570 aa18■□□□□ 0.47
DDX39A-216ENST00000591275 ZNF598Q86UK7 904 aaKnown RBP18■□□□□ 0.47
DDX39A-216ENST00000591275 TMEM173Q86WV6 379 aaPredicted RBP18■□□□□ 0.47
DDX39A-216ENST00000591275 SMAP1Q8IYB5 467 aaPredicted RBP18■□□□□ 0.47
DDX39A-216ENST00000591275 TMEM87AQ8NBN3 555 aa18■□□□□ 0.47
DDX39A-216ENST00000591275 TMEM169Q96HH4 297 aa18■□□□□ 0.47
DDX39A-216ENST00000591275 DBR1Q9UK59 544 aaKnown RBP18■□□□□ 0.47
DDX39A-216ENST00000591275 ZNF292O60281 2723 aa18■□□□□ 0.47
DDX39A-216ENST00000591275 EP300Q09472 2414 aaPredicted RBP17.99■□□□□ 0.47
DDX39A-216ENST00000591275 ZNF862O60290 1169 aa17.99■□□□□ 0.47
DDX39A-216ENST00000591275 ZC3H11AO75152 810 aaKnown RBP eCLIP17.99■□□□□ 0.47
DDX39A-216ENST00000591275 DARSP14868 501 aaKnown RBP17.99■□□□□ 0.47
DDX39A-216ENST00000591275 CDC27P30260 824 aa17.99■□□□□ 0.47
DDX39A-216ENST00000591275 SETQ01105 290 aaPredicted RBP17.99■□□□□ 0.47
DDX39A-216ENST00000591275 LONRF3Q496Y0 759 aa17.99■□□□□ 0.47
DDX39A-216ENST00000591275 ATAT1Q5SQI0 421 aa17.99■□□□□ 0.47
DDX39A-216ENST00000591275 KIAA1841Q6NSI8 718 aa17.99■□□□□ 0.47
DDX39A-216ENST00000591275 ZDHHC14Q8IZN3 488 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms