RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 TMEM87BQ96K49 555 aa19.68■□□□□ 0.74
RETREG3-210ENST00000590541 RIC8AQ9NPQ8 531 aa19.68■□□□□ 0.74
RETREG3-210ENST00000590541 USTQ9Y2C2 406 aa19.68■□□□□ 0.74
RETREG3-210ENST00000590541 NT5C1B-RDH14C9J2C7 533 aa19.67■□□□□ 0.74
RETREG3-210ENST00000590541 NPR3P17342 541 aa19.67■□□□□ 0.74
RETREG3-210ENST00000590541 NECTIN1Q15223 517 aa19.67■□□□□ 0.74
RETREG3-210ENST00000590541 MIS18BP1Q6P0N0 1132 aa19.67■□□□□ 0.74
RETREG3-210ENST00000590541 PLCD3Q8N3E9 789 aa19.67■□□□□ 0.74
RETREG3-210ENST00000590541 METTL13Q8N6R0 699 aa19.67■□□□□ 0.74
RETREG3-210ENST00000590541 FLCNQ8NFG4 579 aa19.67■□□□□ 0.74
RETREG3-210ENST00000590541 BBXQ8WY36 941 aaPredicted RBP19.67■□□□□ 0.74
RETREG3-210ENST00000590541 ADAMTS10Q9H324 1103 aa19.67■□□□□ 0.74
RETREG3-210ENST00000590541 ANO2Q9NQ90 1003 aa19.67■□□□□ 0.74
RETREG3-210ENST00000590541 DBR1Q9UK59 544 aaKnown RBP19.67■□□□□ 0.74
RETREG3-210ENST00000590541 CXCL14O95715 111 aa19.66■□□□□ 0.74
RETREG3-210ENST00000590541 EOMESO95936 686 aa19.66■□□□□ 0.74
RETREG3-210ENST00000590541 FOSP01100 380 aaPredicted RBP19.66■□□□□ 0.74
RETREG3-210ENST00000590541 EPCAMP16422 314 aa19.66■□□□□ 0.74
RETREG3-210ENST00000590541 ZSCAN20P17040 1043 aaPredicted RBP19.66■□□□□ 0.74
RETREG3-210ENST00000590541 AOC1P19801 751 aa19.66■□□□□ 0.74
RETREG3-210ENST00000590541 CA8P35219 290 aa19.66■□□□□ 0.74
RETREG3-210ENST00000590541 SREBF1P36956 1147 aa19.66■□□□□ 0.74
RETREG3-210ENST00000590541 LIFRP42702 1097 aa19.66■□□□□ 0.74
RETREG3-210ENST00000590541 METAP2P50579 478 aaKnown RBP eCLIP19.66■□□□□ 0.74
RETREG3-210ENST00000590541 CLCN3P51790 818 aa19.66■□□□□ 0.74
RETREG3-210ENST00000590541 NLRP11P59045 1033 aaKnown RBP19.66■□□□□ 0.74
RETREG3-210ENST00000590541 ATAT1Q5SQI0 421 aa19.66■□□□□ 0.74
RETREG3-210ENST00000590541 ZNF598Q86UK7 904 aaKnown RBP19.66■□□□□ 0.74
RETREG3-210ENST00000590541 FANCBQ8NB91 859 aa19.66■□□□□ 0.74
RETREG3-210ENST00000590541 RNF169Q8NCN4 708 aa19.66■□□□□ 0.74
RETREG3-210ENST00000590541 CCDC136Q96JN2 1154 aa19.66■□□□□ 0.74
RETREG3-210ENST00000590541 CYP26B1Q9NR63 512 aa19.66■□□□□ 0.74
RETREG3-210ENST00000590541 MAFBQ9Y5Q3 323 aaPredicted RBP19.66■□□□□ 0.74
RETREG3-210ENST00000590541 FAM86B1E9PN63 330 aa19.65■□□□□ 0.74
RETREG3-210ENST00000590541 SLC27A2O14975 620 aa19.65■□□□□ 0.74
RETREG3-210ENST00000590541 FAM86B2P0C5J1 330 aa19.65■□□□□ 0.74
RETREG3-210ENST00000590541 NAPAP54920 295 aa19.65■□□□□ 0.74
RETREG3-210ENST00000590541 BCAR1P56945 870 aa19.65■□□□□ 0.74
RETREG3-210ENST00000590541 NIPA1Q7RTP0 329 aa19.65■□□□□ 0.74
RETREG3-210ENST00000590541 TRMT1LQ7Z2T5 733 aaKnown RBP19.65■□□□□ 0.74
RETREG3-210ENST00000590541 CKAP2LQ8IYA6 745 aa19.65■□□□□ 0.74
RETREG3-210ENST00000590541 CCDC105Q8IYK2 499 aa19.65■□□□□ 0.74
RETREG3-210ENST00000590541 LINC01465Q8N7H1 131 aa19.65■□□□□ 0.74
RETREG3-210ENST00000590541 HELQQ8TDG4 1101 aa19.65■□□□□ 0.74
RETREG3-210ENST00000590541 AUTS2Q8WXX7 1259 aa19.65■□□□□ 0.74
RETREG3-210ENST00000590541 ZBP1Q9H171 429 aa19.65■□□□□ 0.74
RETREG3-210ENST00000590541 DZANK1Q9NVP4 752 aa19.65■□□□□ 0.74
RETREG3-210ENST00000590541 SLC12A7Q9Y666 1083 aa19.65■□□□□ 0.74
RETREG3-210ENST00000590541 DENND4AQ7Z401 1863 aa19.65■□□□□ 0.74
RETREG3-210ENST00000590541 A0A0U1RQF3 1178 aa19.64■□□□□ 0.73
RETREG3-210ENST00000590541 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.64■□□□□ 0.73
RETREG3-210ENST00000590541 EIF4BP23588 611 aaKnown RBP19.64■□□□□ 0.73
RETREG3-210ENST00000590541 CLK2P49760 499 aaKnown RBP19.64■□□□□ 0.73
RETREG3-210ENST00000590541 ANGPT1Q15389 498 aa19.64■□□□□ 0.73
RETREG3-210ENST00000590541 CREB3L3Q68CJ9 461 aa19.64■□□□□ 0.73
RETREG3-210ENST00000590541 TMEM173Q86WV6 379 aaPredicted RBP19.64■□□□□ 0.73
RETREG3-210ENST00000590541 PLA2G4DQ86XP0 818 aa19.64■□□□□ 0.73
RETREG3-210ENST00000590541 TEX2Q8IWB9 1127 aa19.64■□□□□ 0.73
RETREG3-210ENST00000590541 VPS52Q8N1B4 723 aa19.64■□□□□ 0.73
RETREG3-210ENST00000590541 SLC22A17Q8WUG5 538 aa19.64■□□□□ 0.73
RETREG3-210ENST00000590541 AKT3Q9Y243 479 aa19.64■□□□□ 0.73
RETREG3-210ENST00000590541 IRAK3Q9Y616 596 aa19.64■□□□□ 0.73
RETREG3-210ENST00000590541 CNTNAP5Q8WYK1 1306 aa19.64■□□□□ 0.73
RETREG3-210ENST00000590541 GVINP1Q7Z2Y8 2422 aa19.63■□□□□ 0.73
RETREG3-210ENST00000590541 IGLV3-22A0A075B6J6 115 aa19.63■□□□□ 0.73
RETREG3-210ENST00000590541 CDC45O75419 566 aa19.63■□□□□ 0.73
RETREG3-210ENST00000590541 ZNF76P36508 570 aa19.63■□□□□ 0.73
RETREG3-210ENST00000590541 ALDH7A1P49419 539 aaKnown RBP19.63■□□□□ 0.73
RETREG3-210ENST00000590541 ADCY7P51828 1080 aa19.63■□□□□ 0.73
RETREG3-210ENST00000590541 EFCAB12Q6NXP0 572 aa19.63■□□□□ 0.73
RETREG3-210ENST00000590541 PPP1R18Q6NYC8 613 aa19.63■□□□□ 0.73
RETREG3-210ENST00000590541 TMEM169Q96HH4 297 aa19.63■□□□□ 0.73
RETREG3-210ENST00000590541 ZNF668Q96K58 619 aaPredicted RBP19.63■□□□□ 0.73
RETREG3-210ENST00000590541 MRPL9Q9BYD2 267 aaKnown RBP19.63■□□□□ 0.73
RETREG3-210ENST00000590541 LRRC2Q9BYS8 371 aa19.63■□□□□ 0.73
RETREG3-210ENST00000590541 IPO5O00410 1097 aaKnown RBP19.62■□□□□ 0.73
RETREG3-210ENST00000590541 MAGEB2O15479 319 aa19.62■□□□□ 0.73
RETREG3-210ENST00000590541 FGFR4P22455 802 aa19.62■□□□□ 0.73
RETREG3-210ENST00000590541 AP3B2Q13367 1082 aa19.62■□□□□ 0.73
RETREG3-210ENST00000590541 BMS1Q14692 1282 aaKnown RBP19.62■□□□□ 0.73
RETREG3-210ENST00000590541 TMC5Q6UXY8 1006 aa19.62■□□□□ 0.73
RETREG3-210ENST00000590541 MICU3Q86XE3 530 aa19.62■□□□□ 0.73
RETREG3-210ENST00000590541 LRRC71Q8N4P6 559 aa19.62■□□□□ 0.73
RETREG3-210ENST00000590541 CEP131Q9UPN4 1083 aa19.62■□□□□ 0.73
RETREG3-210ENST00000590541 SMCO2A6NFE2 343 aa19.61■□□□□ 0.73
RETREG3-210ENST00000590541 CTSAP10619 480 aa19.61■□□□□ 0.73
RETREG3-210ENST00000590541 DARSP14868 501 aaKnown RBP19.61■□□□□ 0.73
RETREG3-210ENST00000590541 GPC3P51654 580 aa19.61■□□□□ 0.73
RETREG3-210ENST00000590541 FUT2Q10981 343 aa19.61■□□□□ 0.73
RETREG3-210ENST00000590541 TDGQ13569 410 aa19.61■□□□□ 0.73
RETREG3-210ENST00000590541 TSGA10IPQ3SY00 556 aa19.61■□□□□ 0.73
RETREG3-210ENST00000590541 ZNF746Q6NUN9 644 aaPredicted RBP19.61■□□□□ 0.73
RETREG3-210ENST00000590541 GPR149Q86SP6 731 aa19.61■□□□□ 0.73
RETREG3-210ENST00000590541 SGMS1Q86VZ5 419 aa19.61■□□□□ 0.73
RETREG3-210ENST00000590541 DTWD2Q8NBA8 298 aa19.61■□□□□ 0.73
RETREG3-210ENST00000590541 BCL7CQ8WUZ0 217 aaPredicted RBP19.61■□□□□ 0.73
RETREG3-210ENST00000590541 CRYGNQ8WXF5 182 aa19.61■□□□□ 0.73
RETREG3-210ENST00000590541 ACSF2Q96CM8 615 aaPredicted RBP19.61■□□□□ 0.73
RETREG3-210ENST00000590541 MAP7D2Q96T17 732 aa19.61■□□□□ 0.73
RETREG3-210ENST00000590541 RTP3Q9BQQ7 232 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms