RNA–Protein interactions for RNA: ENST00000590171.1

CIRBP-226, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-226ENST00000590171 SCLT1Q96NL6 688 aa23.08■■□□□ 1.29
CIRBP-226ENST00000590171 CYP26B1Q9NR63 512 aa23.08■■□□□ 1.29
CIRBP-226ENST00000590171 SH2B1Q9NRF2 756 aaPredicted RBP23.08■■□□□ 1.29
CIRBP-226ENST00000590171 RGL1Q9NZL6 768 aa23.08■■□□□ 1.29
CIRBP-226ENST00000590171 PCDHB7Q9Y5E2 793 aa23.08■■□□□ 1.29
CIRBP-226ENST00000590171 NEMFO60524 1076 aa23.07■■□□□ 1.28
CIRBP-226ENST00000590171 C4orf19Q8IY42 314 aa23.07■■□□□ 1.28
CIRBP-226ENST00000590171 ZNF579Q8NAF0 562 aaKnown RBP23.07■■□□□ 1.28
CIRBP-226ENST00000590171 C11orf84Q9BUA3 381 aaPredicted RBP23.07■■□□□ 1.28
CIRBP-226ENST00000590171 GRM6O15303 877 aa23.06■■□□□ 1.28
CIRBP-226ENST00000590171 FGFR4P22455 802 aa23.06■■□□□ 1.28
CIRBP-226ENST00000590171 DNM2P50570 870 aa23.06■■□□□ 1.28
CIRBP-226ENST00000590171 KCNQ1P51787 676 aa23.06■■□□□ 1.28
CIRBP-226ENST00000590171 HMGN5P82970 282 aaKnown RBP23.06■■□□□ 1.28
CIRBP-226ENST00000590171 CYP4A11Q02928 519 aa23.06■■□□□ 1.28
CIRBP-226ENST00000590171 CTTNQ14247 550 aaKnown RBP23.06■■□□□ 1.28
CIRBP-226ENST00000590171 SAFBQ15424 915 aaKnown RBP eCLIP23.06■■□□□ 1.28
CIRBP-226ENST00000590171 CEP170P1Q96L14 293 aa23.06■■□□□ 1.28
CIRBP-226ENST00000590171 SUCLA2Q9P2R7 463 aaPredicted RBP23.06■■□□□ 1.28
CIRBP-226ENST00000590171 PCDHA12Q9UN75 941 aa23.06■■□□□ 1.28
CIRBP-226ENST00000590171 A0A087WZ62 844 aa23.05■■□□□ 1.28
CIRBP-226ENST00000590171 CSDE1O75534 798 aaKnown RBP23.05■■□□□ 1.28
CIRBP-226ENST00000590171 YWHABP31946 246 aaKnown RBP23.05■■□□□ 1.28
CIRBP-226ENST00000590171 FAM189BP81408 668 aa23.05■■□□□ 1.28
CIRBP-226ENST00000590171 RABEP1Q15276 862 aa23.05■■□□□ 1.28
CIRBP-226ENST00000590171 AAK1Q2M2I8 961 aa23.05■■□□□ 1.28
CIRBP-226ENST00000590171 TIGD5Q53EQ6 642 aa23.05■■□□□ 1.28
CIRBP-226ENST00000590171 FAM102BQ5T8I3 360 aa23.05■■□□□ 1.28
CIRBP-226ENST00000590171 ADAMTS19Q8TE59 1207 aa23.05■■□□□ 1.28
CIRBP-226ENST00000590171 MTMR9Q96QG7 549 aa23.05■■□□□ 1.28
CIRBP-226ENST00000590171 JPH2Q9BR39 696 aaPredicted RBP23.05■■□□□ 1.28
CIRBP-226ENST00000590171 FDXACB1Q9BRP7 624 aaPredicted RBP23.05■■□□□ 1.28
CIRBP-226ENST00000590171 PLVAPQ9BX97 442 aa23.05■■□□□ 1.28
CIRBP-226ENST00000590171 ELAC1Q9H777 363 aaKnown RBP23.05■■□□□ 1.28
CIRBP-226ENST00000590171 TTC12Q9H892 705 aaPredicted RBP23.05■■□□□ 1.28
CIRBP-226ENST00000590171 RNF216Q9NWF9 866 aaPredicted RBP23.05■■□□□ 1.28
CIRBP-226ENST00000590171 TMEM161AQ9NX61 479 aa23.05■■□□□ 1.28
CIRBP-226ENST00000590171 XIRP2A4UGR9 3374 aa23.05■■□□□ 1.28
CIRBP-226ENST00000590171 CUL9Q8IWT3 2517 aa23.05■■□□□ 1.28
CIRBP-226ENST00000590171 FGFR1P11362 822 aa23.04■■□□□ 1.28
CIRBP-226ENST00000590171 BMP1P13497 986 aa23.04■■□□□ 1.28
CIRBP-226ENST00000590171 ATP2B1P20020 1258 aa23.04■■□□□ 1.28
CIRBP-226ENST00000590171 TXKP42681 527 aa23.04■■□□□ 1.28
CIRBP-226ENST00000590171 CDC42EP1Q00587 391 aa23.04■■□□□ 1.28
CIRBP-226ENST00000590171 RHPN2Q8IUC4 686 aa23.04■■□□□ 1.28
CIRBP-226ENST00000590171 KSR1Q8IVT5 923 aa23.04■■□□□ 1.28
CIRBP-226ENST00000590171 IL27Q8NEV9 243 aa23.04■■□□□ 1.28
CIRBP-226ENST00000590171 FBXO18Q8NFZ0 1043 aa23.04■■□□□ 1.28
CIRBP-226ENST00000590171 SLC7A3Q8WY07 619 aa23.04■■□□□ 1.28
CIRBP-226ENST00000590171 EIF2AK1Q9BQI3 630 aaKnown RBP23.04■■□□□ 1.28
CIRBP-226ENST00000590171 GCOM2Q9BZD3 368 aaPredicted RBP23.04■■□□□ 1.28
CIRBP-226ENST00000590171 TMEM60Q9H2L4 133 aa23.04■■□□□ 1.28
CIRBP-226ENST00000590171 DHX33Q9H6R0 707 aaKnown RBP23.04■■□□□ 1.28
CIRBP-226ENST00000590171 ZSWIM4Q9H7M6 989 aa23.04■■□□□ 1.28
CIRBP-226ENST00000590171 PPME1Q9Y570 386 aa23.04■■□□□ 1.28
CIRBP-226ENST00000590171 TBKBP1A7MCY6 615 aa23.03■■□□□ 1.28
CIRBP-226ENST00000590171 ZBTB39O15060 712 aa23.03■■□□□ 1.28
CIRBP-226ENST00000590171 SLITRK3O94933 977 aa23.03■■□□□ 1.28
CIRBP-226ENST00000590171 ZSCAN20P17040 1043 aaPredicted RBP23.03■■□□□ 1.28
CIRBP-226ENST00000590171 POLGP54098 1239 aaPredicted RBP23.03■■□□□ 1.28
CIRBP-226ENST00000590171 TCEAL5Q5H9L2 206 aa23.03■■□□□ 1.28
CIRBP-226ENST00000590171 ZNF410Q86VK4 478 aa23.03■■□□□ 1.28
CIRBP-226ENST00000590171 FAM184AQ8NB25 1140 aa23.03■■□□□ 1.28
CIRBP-226ENST00000590171 P2RX5Q93086 422 aa23.03■■□□□ 1.28
CIRBP-226ENST00000590171 NLRP4Q96MN2 994 aa23.03■■□□□ 1.28
CIRBP-226ENST00000590171 LMAN2LQ9H0V9 348 aa23.03■■□□□ 1.28
CIRBP-226ENST00000590171 UBE2ZQ9H832 354 aaPredicted RBP23.03■■□□□ 1.28
CIRBP-226ENST00000590171 ATP6V0A4Q9HBG4 840 aa23.03■■□□□ 1.28
CIRBP-226ENST00000590171 ALG13Q9NP73 1137 aaKnown RBP23.03■■□□□ 1.28
CIRBP-226ENST00000590171 BMP2KQ9NSY1 1161 aaPredicted RBP23.03■■□□□ 1.28
CIRBP-226ENST00000590171 MCM7P33993 719 aa23.02■■□□□ 1.28
CIRBP-226ENST00000590171 RFC5P40937 340 aa23.02■■□□□ 1.28
CIRBP-226ENST00000590171 OTUD6AQ7L8S5 288 aa23.02■■□□□ 1.28
CIRBP-226ENST00000590171 TPH2Q8IWU9 490 aa23.02■■□□□ 1.28
CIRBP-226ENST00000590171 HSD17B14Q9BPX1 270 aa23.02■■□□□ 1.28
CIRBP-226ENST00000590171 FOXP1Q9H334 677 aaPredicted RBP23.02■■□□□ 1.28
CIRBP-226ENST00000590171 NSUN3Q9H649 340 aaKnown RBP23.02■■□□□ 1.28
CIRBP-226ENST00000590171 HCSTQ9UBK5 93 aa23.02■■□□□ 1.28
CIRBP-226ENST00000590171 PLAGL2Q9UPG8 496 aa23.02■■□□□ 1.28
CIRBP-226ENST00000590171 KIAA1671Q9BY89 1806 aa23.01■■□□□ 1.27
CIRBP-226ENST00000590171 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.01■■□□□ 1.27
CIRBP-226ENST00000590171 ITGB1P05556 798 aa23.01■■□□□ 1.27
CIRBP-226ENST00000590171 XKR9Q5GH70 373 aa23.01■■□□□ 1.27
CIRBP-226ENST00000590171 ECHDC2Q86YB7 292 aa23.01■■□□□ 1.27
CIRBP-226ENST00000590171 KLHL23Q8NBE8 558 aa23.01■■□□□ 1.27
CIRBP-226ENST00000590171 TMEM143Q96AN5 459 aa23.01■■□□□ 1.27
CIRBP-226ENST00000590171 UHRF1Q96T88 793 aaPredicted RBP23.01■■□□□ 1.27
CIRBP-226ENST00000590171 RNF19AQ9NV58 838 aa23.01■■□□□ 1.27
CIRBP-226ENST00000590171 COL4A3BPQ9Y5P4 624 aa23.01■■□□□ 1.27
CIRBP-226ENST00000590171 POTEMA6NI47 508 aa23■■□□□ 1.27
CIRBP-226ENST00000590171 CSPG5O95196 566 aa23■■□□□ 1.27
CIRBP-226ENST00000590171 LYPLA2O95372 231 aa23■■□□□ 1.27
CIRBP-226ENST00000590171 SFPQP23246 707 aaKnown RBP eCLIP23■■□□□ 1.27
CIRBP-226ENST00000590171 CAMK1Q14012 370 aa23■■□□□ 1.27
CIRBP-226ENST00000590171 EMC2Q15006 297 aa23■■□□□ 1.27
CIRBP-226ENST00000590171 NAALADL2Q58DX5 795 aa23■■□□□ 1.27
CIRBP-226ENST00000590171 EXOC8Q8IYI6 725 aa23■■□□□ 1.27
CIRBP-226ENST00000590171 NEK9Q8TD19 979 aa23■■□□□ 1.27
CIRBP-226ENST00000590171 PRPF31Q8WWY3 499 aaKnown RBP23■■□□□ 1.27
CIRBP-226ENST00000590171 A0A0U1RQF3 1178 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms