RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 ADMP35318 185 aa9.44□□□□□ -0.9
SMAD4-209ENST00000589941 TSNAXIP1Q2TAA8 658 aa9.44□□□□□ -0.9
SMAD4-209ENST00000589941 PAOXQ6QHF9 649 aa9.44□□□□□ -0.9
SMAD4-209ENST00000589941 ASCL5Q7RTU5 278 aa9.44□□□□□ -0.9
SMAD4-209ENST00000589941 ERMP1Q7Z2K6 904 aa9.44□□□□□ -0.9
SMAD4-209ENST00000589941 ATG9AQ7Z3C6 839 aa9.44□□□□□ -0.9
SMAD4-209ENST00000589941 UBE3DQ7Z6J8 389 aa9.44□□□□□ -0.9
SMAD4-209ENST00000589941 SMYD4Q8IYR2 804 aaPredicted RBP9.44□□□□□ -0.9
SMAD4-209ENST00000589941 RNF214Q8ND24 703 aa9.44□□□□□ -0.9
SMAD4-209ENST00000589941 ACER1Q8TDN7 264 aa9.44□□□□□ -0.9
SMAD4-209ENST00000589941 SH3RF3Q8TEJ3 882 aaPredicted RBP9.44□□□□□ -0.9
SMAD4-209ENST00000589941 LPIN2Q92539 896 aa9.44□□□□□ -0.9
SMAD4-209ENST00000589941 GATA6Q92908 595 aa9.44□□□□□ -0.9
SMAD4-209ENST00000589941 ISL2Q96A47 359 aa9.44□□□□□ -0.9
SMAD4-209ENST00000589941 RHOVQ96L33 236 aa9.44□□□□□ -0.9
SMAD4-209ENST00000589941 TMEM74Q96NL1 305 aa9.44□□□□□ -0.9
SMAD4-209ENST00000589941 FEZ1Q99689 392 aa9.44□□□□□ -0.9
SMAD4-209ENST00000589941 SPATC1LQ9H0A9 340 aa9.44□□□□□ -0.9
SMAD4-209ENST00000589941 MIR1-1HGQ9H1L0 117 aa9.44□□□□□ -0.9
SMAD4-209ENST00000589941 HIPK3Q9H422 1215 aa9.44□□□□□ -0.9
SMAD4-209ENST00000589941 RPAP3Q9H6T3 665 aaPredicted RBP9.44□□□□□ -0.9
SMAD4-209ENST00000589941 KBTBD4Q9NVX7 518 aa9.44□□□□□ -0.9
SMAD4-209ENST00000589941 KIAA1522Q9P206 1035 aaPredicted RBP9.44□□□□□ -0.9
SMAD4-209ENST00000589941 ABCF2Q9UG63 623 aa9.44□□□□□ -0.9
SMAD4-209ENST00000589941 MUTYHQ9UIF7 546 aa9.44□□□□□ -0.9
SMAD4-209ENST00000589941 MROH7Q68CQ1 1323 aa9.44□□□□□ -0.9
SMAD4-209ENST00000589941 TRIP12Q14669 1992 aaPredicted RBP9.44□□□□□ -0.9
SMAD4-209ENST00000589941 PTPRZ1P23471 2315 aaPredicted RBP9.44□□□□□ -0.9
SMAD4-209ENST00000589941 MAP1BP46821 2468 aaKnown RBP9.44□□□□□ -0.9
SMAD4-209ENST00000589941 USP24Q9UPU5 2620 aa9.44□□□□□ -0.9
SMAD4-209ENST00000589941 ZNF536O15090 1300 aa9.43□□□□□ -0.9
SMAD4-209ENST00000589941 MINDY4BA8MYZ0 360 aa9.43□□□□□ -0.9
SMAD4-209ENST00000589941 H3BQ06 376 aaPredicted RBP9.43□□□□□ -0.9
SMAD4-209ENST00000589941 ARVCFO00192 962 aa9.43□□□□□ -0.9
SMAD4-209ENST00000589941 GH2P01242 217 aa9.43□□□□□ -0.9
SMAD4-209ENST00000589941 ASGR1P07306 291 aa9.43□□□□□ -0.9
SMAD4-209ENST00000589941 AKR1A1P14550 325 aa9.43□□□□□ -0.9
SMAD4-209ENST00000589941 GBP2P32456 591 aaPredicted RBP9.43□□□□□ -0.9
SMAD4-209ENST00000589941 CAMK2GQ13555 558 aaPredicted RBP9.43□□□□□ -0.9
SMAD4-209ENST00000589941 MAP7Q14244 749 aa9.43□□□□□ -0.9
SMAD4-209ENST00000589941 ATP2B3Q16720 1220 aa9.43□□□□□ -0.9
SMAD4-209ENST00000589941 RELL1Q8IUW5 271 aa9.43□□□□□ -0.9
SMAD4-209ENST00000589941 NUP133Q8WUM0 1156 aa9.43□□□□□ -0.9
SMAD4-209ENST00000589941 ELMO3Q96BJ8 720 aa9.43□□□□□ -0.9
SMAD4-209ENST00000589941 MRRFQ96E11 262 aaKnown RBP9.43□□□□□ -0.9
SMAD4-209ENST00000589941 DBNDD2Q9BQY9 259 aa9.43□□□□□ -0.9
SMAD4-209ENST00000589941 C1GALT1Q9NS00 363 aa9.43□□□□□ -0.9
SMAD4-209ENST00000589941 DENND2AQ9ULE3 1009 aa9.43□□□□□ -0.9
SMAD4-209ENST00000589941 ELP1O95163 1332 aa9.42□□□□□ -0.9
SMAD4-209ENST00000589941 A0A0U1RQG5 324 aaPredicted RBP9.42□□□□□ -0.9
SMAD4-209ENST00000589941 F13BP05160 661 aa9.42□□□□□ -0.9
SMAD4-209ENST00000589941 PTGS1P23219 599 aa9.42□□□□□ -0.9
SMAD4-209ENST00000589941 RFX5P48382 616 aaPredicted RBP9.42□□□□□ -0.9
SMAD4-209ENST00000589941 VCPP55072 806 aaKnown RBP9.42□□□□□ -0.9
SMAD4-209ENST00000589941 WIPI1Q5MNZ9 446 aaPredicted RBP9.42□□□□□ -0.9
SMAD4-209ENST00000589941 BNC2Q6ZN30 1099 aaPredicted RBP9.42□□□□□ -0.9
SMAD4-209ENST00000589941 CYFIP1Q7L576 1253 aa9.42□□□□□ -0.9
SMAD4-209ENST00000589941 TMCO2Q7Z6W1 182 aaPredicted RBP9.42□□□□□ -0.9
SMAD4-209ENST00000589941 ZDHHC13Q8IUH4 622 aa9.42□□□□□ -0.9
SMAD4-209ENST00000589941 TEX11Q8IYF3 940 aa9.42□□□□□ -0.9
SMAD4-209ENST00000589941 FBXL6Q8N531 539 aa9.42□□□□□ -0.9
SMAD4-209ENST00000589941 SHKBP1Q8TBC3 707 aa9.42□□□□□ -0.9
SMAD4-209ENST00000589941 TINF2Q9BSI4 451 aa9.42□□□□□ -0.9
SMAD4-209ENST00000589941 MTUS1Q9ULD2 1270 aa9.42□□□□□ -0.9
SMAD4-209ENST00000589941 FLT1P17948 1338 aa9.41□□□□□ -0.9
SMAD4-209ENST00000589941 PRAMEF27A3QJZ7 478 aa9.41□□□□□ -0.9
SMAD4-209ENST00000589941 CTAGE5O15320 804 aa9.41□□□□□ -0.9
SMAD4-209ENST00000589941 GSC2O15499 205 aa9.41□□□□□ -0.9
SMAD4-209ENST00000589941 LMNB2Q03252 620 aa9.41□□□□□ -0.9
SMAD4-209ENST00000589941 FAM160A1Q05DH4 1040 aa9.41□□□□□ -0.9
SMAD4-209ENST00000589941 WDR43Q15061 677 aaKnown RBP eCLIP9.41□□□□□ -0.9
SMAD4-209ENST00000589941 KIAA1755Q5JYT7 1200 aa9.41□□□□□ -0.9
SMAD4-209ENST00000589941 ZBTB37Q5TC79 503 aa9.41□□□□□ -0.9
SMAD4-209ENST00000589941 METTL16Q86W50 562 aaKnown RBP9.41□□□□□ -0.9
SMAD4-209ENST00000589941 MAPKAPK5Q8IW41 473 aa9.41□□□□□ -0.9
SMAD4-209ENST00000589941 SHCBP1Q8NEM2 672 aa9.41□□□□□ -0.9
SMAD4-209ENST00000589941 GLT1D1Q96MS3 346 aa9.41□□□□□ -0.9
SMAD4-209ENST00000589941 TBC1D32Q96NH3 1257 aa9.41□□□□□ -0.9
SMAD4-209ENST00000589941 TRPV6Q9H1D0 765 aa9.41□□□□□ -0.9
SMAD4-209ENST00000589941 NRBP1Q9UHY1 535 aa9.41□□□□□ -0.9
SMAD4-209ENST00000589941 GGT7Q9UJ14 662 aa9.41□□□□□ -0.9
SMAD4-209ENST00000589941 NOP58Q9Y2X3 529 aaKnown RBP9.41□□□□□ -0.9
SMAD4-209ENST00000589941 PKD1L2Q7Z442 2459 aa9.41□□□□□ -0.9
SMAD4-209ENST00000589941 RALGAPA2Q2PPJ7 1873 aa9.4□□□□□ -0.9
SMAD4-209ENST00000589941 GRIN2DO15399 1336 aa9.4□□□□□ -0.9
SMAD4-209ENST00000589941 TPRP12270 2363 aaKnown RBP9.4□□□□□ -0.9
SMAD4-209ENST00000589941 PRR23AA6NEV1 266 aa9.4□□□□□ -0.9
SMAD4-209ENST00000589941 WDR64B1ANS9 1081 aa9.4□□□□□ -0.9
SMAD4-209ENST00000589941 EYA2O00167 538 aa9.4□□□□□ -0.9
SMAD4-209ENST00000589941 GFRA2O00451 464 aa9.4□□□□□ -0.9
SMAD4-209ENST00000589941 STRNO43815 780 aa9.4□□□□□ -0.9
SMAD4-209ENST00000589941 B4GALT4O60513 344 aa9.4□□□□□ -0.9
SMAD4-209ENST00000589941 ALDH1L1O75891 902 aa9.4□□□□□ -0.9
SMAD4-209ENST00000589941 C6orf222P0C671 652 aaPredicted RBP9.4□□□□□ -0.9
SMAD4-209ENST00000589941 GARTP22102 1010 aa9.4□□□□□ -0.9
SMAD4-209ENST00000589941 VAMP1P23763 118 aa9.4□□□□□ -0.9
SMAD4-209ENST00000589941 CST5P28325 142 aaPredicted RBP9.4□□□□□ -0.9
SMAD4-209ENST00000589941 CALD1Q05682 793 aaKnown RBP9.4□□□□□ -0.9
SMAD4-209ENST00000589941 PLS1Q14651 629 aa9.4□□□□□ -0.9
SMAD4-209ENST00000589941 SLC4A10Q6U841 1118 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms