RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 ABCD1P33897 745 aa15.62■□□□□ 0.09
SMARCA4-214ENST00000589677 SCTRP47872 440 aa15.62■□□□□ 0.09
SMARCA4-214ENST00000589677 TMED10P49755 219 aaKnown RBP15.62■□□□□ 0.09
SMARCA4-214ENST00000589677 YARSP54577 528 aaKnown RBP15.62■□□□□ 0.09
SMARCA4-214ENST00000589677 RABGAP1LQ5R372 815 aa15.62■□□□□ 0.09
SMARCA4-214ENST00000589677 RSRC2Q7L4I2 434 aaKnown RBP15.62■□□□□ 0.09
SMARCA4-214ENST00000589677 DNAJC10Q8IXB1 793 aa15.62■□□□□ 0.09
SMARCA4-214ENST00000589677 RIOK1Q9BRS2 568 aaKnown RBP15.62■□□□□ 0.09
SMARCA4-214ENST00000589677 FUCA2Q9BTY2 467 aa15.62■□□□□ 0.09
SMARCA4-214ENST00000589677 ING2Q9H160 280 aa15.62■□□□□ 0.09
SMARCA4-214ENST00000589677 KPNA7A9QM74 516 aa15.61■□□□□ 0.09
SMARCA4-214ENST00000589677 NQO1P15559 274 aaKnown RBP15.61■□□□□ 0.09
SMARCA4-214ENST00000589677 SPOPLQ6IQ16 392 aa15.61■□□□□ 0.09
SMARCA4-214ENST00000589677 RBM43Q6ZSC3 357 aaKnown RBP15.61■□□□□ 0.09
SMARCA4-214ENST00000589677 LCA5Q86VQ0 697 aa15.61■□□□□ 0.09
SMARCA4-214ENST00000589677 CCDC117Q8IWD4 279 aaPredicted RBP15.61■□□□□ 0.09
SMARCA4-214ENST00000589677 GIPC2Q8TF65 315 aa15.61■□□□□ 0.09
SMARCA4-214ENST00000589677 FBXO2Q9UK22 296 aaPredicted RBP15.61■□□□□ 0.09
SMARCA4-214ENST00000589677 ZBED4O75132 1171 aa15.61■□□□□ 0.09
SMARCA4-214ENST00000589677 TMEM191BP0C7N4 346 aa15.61■□□□□ 0.09
SMARCA4-214ENST00000589677 NOP14P78316 857 aaKnown RBP15.61■□□□□ 0.09
SMARCA4-214ENST00000589677 NUDCD3Q8IVD9 361 aa15.61■□□□□ 0.09
SMARCA4-214ENST00000589677 ENAHQ8N8S7 591 aaPredicted RBP15.61■□□□□ 0.09
SMARCA4-214ENST00000589677 TET3O43151 1660 aa15.61■□□□□ 0.09
SMARCA4-214ENST00000589677 CDH16O75309 829 aa15.61■□□□□ 0.09
SMARCA4-214ENST00000589677 GYG1P46976 350 aa15.61■□□□□ 0.09
SMARCA4-214ENST00000589677 ZNF211Q13398 564 aaPredicted RBP15.61■□□□□ 0.09
SMARCA4-214ENST00000589677 LAMB3Q13751 1172 aa15.61■□□□□ 0.09
SMARCA4-214ENST00000589677 RSPH3Q86UC2 560 aa15.61■□□□□ 0.09
SMARCA4-214ENST00000589677 LRRC47Q8N1G4 583 aaKnown RBP15.61■□□□□ 0.09
SMARCA4-214ENST00000589677 DTX3LQ8TDB6 740 aa15.61■□□□□ 0.09
SMARCA4-214ENST00000589677 LRRIQ3A6PVS8 624 aaPredicted RBP15.61■□□□□ 0.09
SMARCA4-214ENST00000589677 NCAPHQ15003 741 aa15.61■□□□□ 0.09
SMARCA4-214ENST00000589677 BRDTQ58F21 947 aaPredicted RBP15.61■□□□□ 0.09
SMARCA4-214ENST00000589677 ACBD5Q5T8D3 534 aaPredicted RBP15.61■□□□□ 0.09
SMARCA4-214ENST00000589677 ZBTB8OSQ8IWT0 167 aa15.61■□□□□ 0.09
SMARCA4-214ENST00000589677 PPCSQ9HAB8 311 aa15.61■□□□□ 0.09
SMARCA4-214ENST00000589677 IL1RAPL1Q9NZN1 696 aa15.61■□□□□ 0.09
SMARCA4-214ENST00000589677 CASP2P42575 452 aa15.6■□□□□ 0.09
SMARCA4-214ENST00000589677 PAPOLAP51003 745 aaKnown RBP15.6■□□□□ 0.09
SMARCA4-214ENST00000589677 TRIM59Q8IWR1 403 aa15.6■□□□□ 0.09
SMARCA4-214ENST00000589677 LCORLQ8N3X6 602 aa15.6■□□□□ 0.09
SMARCA4-214ENST00000589677 RNF169Q8NCN4 708 aa15.6■□□□□ 0.09
SMARCA4-214ENST00000589677 ERP27Q96DN0 273 aa15.6■□□□□ 0.09
SMARCA4-214ENST00000589677 WDR11Q9BZH6 1224 aa15.6■□□□□ 0.09
SMARCA4-214ENST00000589677 CNOT8Q9UFF9 292 aaKnown RBP15.6■□□□□ 0.09
SMARCA4-214ENST00000589677 CNGA3Q16281 694 aa15.6■□□□□ 0.09
SMARCA4-214ENST00000589677 OLFML2BQ68BL8 750 aa15.6■□□□□ 0.09
SMARCA4-214ENST00000589677 DPP8Q6V1X1 898 aaPredicted RBP15.6■□□□□ 0.09
SMARCA4-214ENST00000589677 ATP11CQ8NB49 1132 aa15.6■□□□□ 0.09
SMARCA4-214ENST00000589677 MS4A14Q96JA4 679 aa15.6■□□□□ 0.09
SMARCA4-214ENST00000589677 AMNQ9BXJ7 453 aa15.6■□□□□ 0.09
SMARCA4-214ENST00000589677 ANAPC7Q9UJX3 599 aa15.6■□□□□ 0.09
SMARCA4-214ENST00000589677 PLEKHG2Q9H7P9 1386 aa15.6■□□□□ 0.09
SMARCA4-214ENST00000589677 PHKG2P15735 406 aa15.6■□□□□ 0.09
SMARCA4-214ENST00000589677 FGFR4P22455 802 aa15.6■□□□□ 0.09
SMARCA4-214ENST00000589677 CARSP49589 748 aaKnown RBP15.6■□□□□ 0.09
SMARCA4-214ENST00000589677 PSMC1P62191 440 aaKnown RBP15.6■□□□□ 0.09
SMARCA4-214ENST00000589677 RANBP17Q9H2T7 1088 aaKnown RBP15.6■□□□□ 0.09
SMARCA4-214ENST00000589677 CCDC87Q9NVE4 849 aa15.6■□□□□ 0.09
SMARCA4-214ENST00000589677 SLC18A3Q16572 532 aa15.6■□□□□ 0.09
SMARCA4-214ENST00000589677 TRAPPC11Q7Z392 1133 aa15.6■□□□□ 0.09
SMARCA4-214ENST00000589677 TRABDQ9H4I3 376 aa15.6■□□□□ 0.09
SMARCA4-214ENST00000589677 SCHIP1Q9P0W5 487 aaPredicted RBP15.6■□□□□ 0.09
SMARCA4-214ENST00000589677 BCORL1Q5H9F3 1711 aa15.59■□□□□ 0.09
SMARCA4-214ENST00000589677 RNF103-CHMP3A0A140T963 221 aa15.59■□□□□ 0.09
SMARCA4-214ENST00000589677 HNRNPDLO14979 420 aaKnown RBP15.59■□□□□ 0.09
SMARCA4-214ENST00000589677 KIF2BQ8N4N8 673 aa15.59■□□□□ 0.09
SMARCA4-214ENST00000589677 BTBD6Q96KE9 485 aa15.59■□□□□ 0.09
SMARCA4-214ENST00000589677 KLC2Q9H0B6 622 aa15.59■□□□□ 0.09
SMARCA4-214ENST00000589677 UBN2Q6ZU65 1347 aa15.59■□□□□ 0.09
SMARCA4-214ENST00000589677 USP42Q9H9J4 1324 aaKnown RBP15.59■□□□□ 0.09
SMARCA4-214ENST00000589677 NLRP1Q9C000 1473 aa15.59■□□□□ 0.09
SMARCA4-214ENST00000589677 A0A1W2PQJ5 194 aa15.59■□□□□ 0.09
SMARCA4-214ENST00000589677 MED7O43513 233 aa15.59■□□□□ 0.09
SMARCA4-214ENST00000589677 PRKAB2O43741 272 aa15.59■□□□□ 0.09
SMARCA4-214ENST00000589677 GHRP10912 638 aa15.59■□□□□ 0.09
SMARCA4-214ENST00000589677 RFX1P22670 979 aa15.59■□□□□ 0.09
SMARCA4-214ENST00000589677 EXOSC10Q01780 885 aaKnown RBP15.59■□□□□ 0.09
SMARCA4-214ENST00000589677 PFKFB3Q16875 520 aaPredicted RBP15.59■□□□□ 0.09
SMARCA4-214ENST00000589677 PRPF31Q8WWY3 499 aaKnown RBP15.59■□□□□ 0.09
SMARCA4-214ENST00000589677 CALN1Q9BXU9 219 aa15.59■□□□□ 0.09
SMARCA4-214ENST00000589677 GREM2Q9H772 168 aa15.59■□□□□ 0.09
SMARCA4-214ENST00000589677 GYPCP04921 128 aa15.59■□□□□ 0.09
SMARCA4-214ENST00000589677 RPS8P62241 208 aaKnown RBP15.59■□□□□ 0.09
SMARCA4-214ENST00000589677 RCSD1Q6JBY9 416 aa15.59■□□□□ 0.09
SMARCA4-214ENST00000589677 ENGASEQ8NFI3 743 aa15.59■□□□□ 0.09
SMARCA4-214ENST00000589677 RAD54LQ92698 747 aa15.59■□□□□ 0.09
SMARCA4-214ENST00000589677 CDC42BPAQ5VT25 1732 aa15.59■□□□□ 0.09
SMARCA4-214ENST00000589677 PLEKHA8P1O95397 391 aa15.59■□□□□ 0.09
SMARCA4-214ENST00000589677 ATP2C1P98194 919 aaPredicted RBP15.59■□□□□ 0.09
SMARCA4-214ENST00000589677 KIAA2013Q8IYS2 634 aa15.59■□□□□ 0.09
SMARCA4-214ENST00000589677 OXER1Q8TDS5 423 aa15.59■□□□□ 0.09
SMARCA4-214ENST00000589677 FAF2Q96CS3 445 aa15.59■□□□□ 0.09
SMARCA4-214ENST00000589677 PIGSQ96S52 555 aa15.59■□□□□ 0.09
SMARCA4-214ENST00000589677 STRBPQ96SI9 672 aaKnown RBP15.59■□□□□ 0.09
SMARCA4-214ENST00000589677 PAPOLBQ9NRJ5 636 aaKnown RBP15.59■□□□□ 0.09
SMARCA4-214ENST00000589677 GOLGA8CPA6NN73 597 aa15.58■□□□□ 0.09
SMARCA4-214ENST00000589677 RAD51CO43502 376 aa15.58■□□□□ 0.09
SMARCA4-214ENST00000589677 KITP10721 976 aa15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms