RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 ALDH7A1P49419 539 aaKnown RBP17.26■□□□□ 0.35
ACTN4-211ENST00000589528 NLRP11P59045 1033 aaKnown RBP17.26■□□□□ 0.35
ACTN4-211ENST00000589528 SETQ01105 290 aaPredicted RBP17.26■□□□□ 0.35
ACTN4-211ENST00000589528 DSC3Q14574 896 aa17.26■□□□□ 0.35
ACTN4-211ENST00000589528 JAKMIP3Q5VZ66 844 aa17.26■□□□□ 0.35
ACTN4-211ENST00000589528 ZNF746Q6NUN9 644 aaPredicted RBP17.26■□□□□ 0.35
ACTN4-211ENST00000589528 EFCAB12Q6NXP0 572 aa17.26■□□□□ 0.35
ACTN4-211ENST00000589528 LRRC55Q6ZSA7 311 aa17.26■□□□□ 0.35
ACTN4-211ENST00000589528 ECHDC2Q86YB7 292 aa17.26■□□□□ 0.35
ACTN4-211ENST00000589528 SMAP1Q8IYB5 467 aaPredicted RBP17.26■□□□□ 0.35
ACTN4-211ENST00000589528 FAM167AQ96KS9 214 aa17.26■□□□□ 0.35
ACTN4-211ENST00000589528 LSG1Q9H089 658 aaKnown RBP17.26■□□□□ 0.35
ACTN4-211ENST00000589528 ADAM7Q9H2U9 754 aa17.26■□□□□ 0.35
ACTN4-211ENST00000589528 POMKQ9H5K3 350 aa17.26■□□□□ 0.35
ACTN4-211ENST00000589528 BARHL2Q9NY43 387 aa17.26■□□□□ 0.35
ACTN4-211ENST00000589528 FAM86B1E9PN63 330 aa17.25■□□□□ 0.35
ACTN4-211ENST00000589528 BRD1O95696 1058 aa17.25■□□□□ 0.35
ACTN4-211ENST00000589528 FAM86B2P0C5J1 330 aa17.25■□□□□ 0.35
ACTN4-211ENST00000589528 ATP4AP20648 1035 aa17.25■□□□□ 0.35
ACTN4-211ENST00000589528 CLK2P49760 499 aaKnown RBP17.25■□□□□ 0.35
ACTN4-211ENST00000589528 COL9A3Q14050 684 aaPredicted RBP17.25■□□□□ 0.35
ACTN4-211ENST00000589528 RNF20Q5VTR2 975 aa17.25■□□□□ 0.35
ACTN4-211ENST00000589528 TDRD5Q8NAT2 981 aaKnown RBP17.25■□□□□ 0.35
ACTN4-211ENST00000589528 MRPL9Q9BYD2 267 aaKnown RBP17.25■□□□□ 0.35
ACTN4-211ENST00000589528 ANO2Q9NQ90 1003 aa17.25■□□□□ 0.35
ACTN4-211ENST00000589528 GABBR1Q9UBS5 961 aa17.25■□□□□ 0.35
ACTN4-211ENST00000589528 CDH22Q9UJ99 828 aa17.25■□□□□ 0.35
ACTN4-211ENST00000589528 DBR1Q9UK59 544 aaKnown RBP17.25■□□□□ 0.35
ACTN4-211ENST00000589528 NAP1L2Q9ULW6 460 aaPredicted RBP17.25■□□□□ 0.35
ACTN4-211ENST00000589528 PCDHA10Q9Y5I2 948 aa17.25■□□□□ 0.35
ACTN4-211ENST00000589528 MAFBQ9Y5Q3 323 aaPredicted RBP17.25■□□□□ 0.35
ACTN4-211ENST00000589528 MYO15AQ9UKN7 3530 aa17.24■□□□□ 0.35
ACTN4-211ENST00000589528 C2orf71A6NGG8 1288 aa17.24■□□□□ 0.35
ACTN4-211ENST00000589528 SPDYE4A6NLX3 237 aa17.24■□□□□ 0.35
ACTN4-211ENST00000589528 GOLGA8AA7E2F4 631 aa17.24■□□□□ 0.35
ACTN4-211ENST00000589528 GOLGA8BA8MQT2 603 aa17.24■□□□□ 0.35
ACTN4-211ENST00000589528 DHX15O43143 795 aaKnown RBP17.24■□□□□ 0.35
ACTN4-211ENST00000589528 EIF4BP23588 611 aaKnown RBP17.24■□□□□ 0.35
ACTN4-211ENST00000589528 METAP2P50579 478 aaKnown RBP eCLIP17.24■□□□□ 0.351e-6■■□□□ 13.3
ACTN4-211ENST00000589528 RARS2Q5T160 578 aaKnown RBP17.24■□□□□ 0.35
ACTN4-211ENST00000589528 ZNF710Q8N1W2 664 aa17.24■□□□□ 0.35
ACTN4-211ENST00000589528 LRRC71Q8N4P6 559 aa17.24■□□□□ 0.35
ACTN4-211ENST00000589528 MRPL43Q8N983 215 aaKnown RBP17.24■□□□□ 0.35
ACTN4-211ENST00000589528 HELQQ8TDG4 1101 aa17.24■□□□□ 0.35
ACTN4-211ENST00000589528 TMEM169Q96HH4 297 aa17.24■□□□□ 0.35
ACTN4-211ENST00000589528 ZNF668Q96K58 619 aaPredicted RBP17.24■□□□□ 0.35
ACTN4-211ENST00000589528 RNF19AQ9NV58 838 aa17.24■□□□□ 0.35
ACTN4-211ENST00000589528 DACT1Q9NYF0 836 aa17.24■□□□□ 0.35
ACTN4-211ENST00000589528 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.23■□□□□ 0.35
ACTN4-211ENST00000589528 CLASP2O75122 1294 aaKnown RBP17.23■□□□□ 0.35
ACTN4-211ENST00000589528 CXCL14O95715 111 aa17.23■□□□□ 0.35
ACTN4-211ENST00000589528 FOXK2Q01167 660 aa17.23■□□□□ 0.35
ACTN4-211ENST00000589528 CLLU1OSQ5K130 101 aa17.23■□□□□ 0.35
ACTN4-211ENST00000589528 SLC39A11Q8N1S5 342 aa17.23■□□□□ 0.35
ACTN4-211ENST00000589528 NLRP7Q8WX94 980 aa17.23■□□□□ 0.35
ACTN4-211ENST00000589528 NRBP2Q9NSY0 501 aa17.23■□□□□ 0.35
ACTN4-211ENST00000589528 DZANK1Q9NVP4 752 aa17.23■□□□□ 0.35
ACTN4-211ENST00000589528 FAM186AA6NE01 2351 aa17.23■□□□□ 0.35
ACTN4-211ENST00000589528 RIF1Q5UIP0 2472 aaKnown RBP17.22■□□□□ 0.35
ACTN4-211ENST00000589528 IGLV3-22A0A075B6J6 115 aa17.22■□□□□ 0.35
ACTN4-211ENST00000589528 NT5C1B-RDH14C9J2C7 533 aa17.22■□□□□ 0.35
ACTN4-211ENST00000589528 EOMESO95936 686 aa17.22■□□□□ 0.35
ACTN4-211ENST00000589528 ASGR2P07307 311 aa17.22■□□□□ 0.35
ACTN4-211ENST00000589528 CYP3A4P08684 503 aa17.22■□□□□ 0.35
ACTN4-211ENST00000589528 WEE2P0C1S8 567 aa17.22■□□□□ 0.35
ACTN4-211ENST00000589528 BCAR1P56945 870 aa17.22■□□□□ 0.35
ACTN4-211ENST00000589528 NECTIN1Q15223 517 aa17.22■□□□□ 0.35
ACTN4-211ENST00000589528 PRR16Q569H4 304 aa17.22■□□□□ 0.35
ACTN4-211ENST00000589528 ATAT1Q5SQI0 421 aa17.22■□□□□ 0.35
ACTN4-211ENST00000589528 MCTP2Q6DN12 878 aa17.22■□□□□ 0.35
ACTN4-211ENST00000589528 ASTLQ6HA08 431 aaPredicted RBP17.22■□□□□ 0.35
ACTN4-211ENST00000589528 VPS52Q8N1B4 723 aa17.22■□□□□ 0.35
ACTN4-211ENST00000589528 PLCD3Q8N3E9 789 aa17.22■□□□□ 0.35
ACTN4-211ENST00000589528 CCDC12Q8WUD4 166 aaPredicted RBP17.22■□□□□ 0.35
ACTN4-211ENST00000589528 ESYT1Q9BSJ8 1104 aa17.22■□□□□ 0.35
ACTN4-211ENST00000589528 ADAMTS10Q9H324 1103 aa17.22■□□□□ 0.35
ACTN4-211ENST00000589528 LIMD1Q9UGP4 676 aa17.22■□□□□ 0.35
ACTN4-211ENST00000589528 A0A0U1RQF3 1178 aa17.21■□□□□ 0.35
ACTN4-211ENST00000589528 KLF18A0A0U1RQI7 1052 aa17.21■□□□□ 0.35
ACTN4-211ENST00000589528 WDR64B1ANS9 1081 aa17.21■□□□□ 0.35
ACTN4-211ENST00000589528 PROB1E7EW31 1015 aa17.21■□□□□ 0.35
ACTN4-211ENST00000589528 ZC3H11AO75152 810 aaKnown RBP eCLIP17.21■□□□□ 0.35
ACTN4-211ENST00000589528 FGFR4P22455 802 aa17.21■□□□□ 0.35
ACTN4-211ENST00000589528 FGD1P98174 961 aa17.21■□□□□ 0.35
ACTN4-211ENST00000589528 TBC1D8BQ0IIM8 1120 aa17.21■□□□□ 0.35
ACTN4-211ENST00000589528 ASCL5Q7RTU5 278 aa17.21■□□□□ 0.35
ACTN4-211ENST00000589528 REXO1Q8N1G1 1221 aaKnown RBP17.21■□□□□ 0.35
ACTN4-211ENST00000589528 TMEM105Q8N8V8 129 aa17.21■□□□□ 0.35
ACTN4-211ENST00000589528 TCEANC2Q96MN5 208 aa17.21■□□□□ 0.35
ACTN4-211ENST00000589528 C6orf50Q9HD87 102 aa17.21■□□□□ 0.35
ACTN4-211ENST00000589528 BRPF3Q9ULD4 1205 aa17.21■□□□□ 0.35
ACTN4-211ENST00000589528 VPS13AQ96RL7 3174 aa17.21■□□□□ 0.35
ACTN4-211ENST00000589528 CARNS1A5YM72 827 aa17.2■□□□□ 0.34
ACTN4-211ENST00000589528 OATP04181 439 aa17.2■□□□□ 0.34
ACTN4-211ENST00000589528 DARSP14868 501 aaKnown RBP17.2■□□□□ 0.34
ACTN4-211ENST00000589528 GPC3P51654 580 aa17.2■□□□□ 0.34
ACTN4-211ENST00000589528 PRKCEQ02156 737 aa17.2■□□□□ 0.34
ACTN4-211ENST00000589528 FUT2Q10981 343 aa17.2■□□□□ 0.34
ACTN4-211ENST00000589528 GIT2Q14161 759 aa17.2■□□□□ 0.34
ACTN4-211ENST00000589528 KIAA1841Q6NSI8 718 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms