RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 SETD4Q9NVD3 440 aa16.03■□□□□ 0.16
NPC1-207ENST00000588867 SEL1LQ9UBV2 794 aa16.03■□□□□ 0.16
NPC1-207ENST00000588867 CCDC169A6NNP5 214 aa16.02■□□□□ 0.16
NPC1-207ENST00000588867 BECN2A8MW95 431 aa16.02■□□□□ 0.16
NPC1-207ENST00000588867 SMIM10L2AP0DMW4 78 aa16.02■□□□□ 0.16
NPC1-207ENST00000588867 SMIM10L2BP0DMW5 78 aa16.02■□□□□ 0.16
NPC1-207ENST00000588867 STX17P56962 302 aa16.02■□□□□ 0.16
NPC1-207ENST00000588867 MTFR1Q15390 333 aa16.02■□□□□ 0.16
NPC1-207ENST00000588867 EFCAB12Q6NXP0 572 aa16.02■□□□□ 0.16
NPC1-207ENST00000588867 PCSK9Q8NBP7 692 aaKnown RBP16.02■□□□□ 0.16
NPC1-207ENST00000588867 JPH2Q9BR39 696 aaPredicted RBP16.02■□□□□ 0.16
NPC1-207ENST00000588867 OLFML3Q9NRN5 406 aa16.02■□□□□ 0.16
NPC1-207ENST00000588867 CTNND2Q9UQB3 1225 aa16.02■□□□□ 0.16
NPC1-207ENST00000588867 COL1A2P08123 1366 aa16.02■□□□□ 0.16
NPC1-207ENST00000588867 HAS3O00219 553 aa16.02■□□□□ 0.15
NPC1-207ENST00000588867 MYBP10242 640 aa16.02■□□□□ 0.15
NPC1-207ENST00000588867 CASP5P51878 434 aa16.02■□□□□ 0.15
NPC1-207ENST00000588867 DRP2Q13474 957 aa16.02■□□□□ 0.15
NPC1-207ENST00000588867 MYOCDQ8IZQ8 938 aa16.02■□□□□ 0.15
NPC1-207ENST00000588867 AOPEPQ8N6M6 819 aa16.02■□□□□ 0.15
NPC1-207ENST00000588867 C7orf31Q8N865 590 aa16.02■□□□□ 0.15
NPC1-207ENST00000588867 RETREG2Q8NC44 543 aa16.02■□□□□ 0.15
NPC1-207ENST00000588867 VTI1AQ96AJ9 217 aa16.02■□□□□ 0.15
NPC1-207ENST00000588867 IFT74Q96LB3 600 aa16.02■□□□□ 0.15
NPC1-207ENST00000588867 RNF208Q9H0X6 261 aa16.02■□□□□ 0.15
NPC1-207ENST00000588867 HTTP42858 3142 aa16.01■□□□□ 0.15
NPC1-207ENST00000588867 RRN3P2A6NIE6 340 aa16.01■□□□□ 0.15
NPC1-207ENST00000588867 PSMA7O14818 248 aa16.01■□□□□ 0.15
NPC1-207ENST00000588867 MAGEB2O15479 319 aa16.01■□□□□ 0.15
NPC1-207ENST00000588867 C22orf31O95567 290 aa16.01■□□□□ 0.15
NPC1-207ENST00000588867 CST5P28325 142 aaPredicted RBP16.01■□□□□ 0.15
NPC1-207ENST00000588867 DNM2P50570 870 aa16.01■□□□□ 0.15
NPC1-207ENST00000588867 PAK1Q13153 545 aa16.01■□□□□ 0.15
NPC1-207ENST00000588867 DMP1Q13316 513 aaPredicted RBP16.01■□□□□ 0.15
NPC1-207ENST00000588867 IER5Q5VY09 327 aa16.01■□□□□ 0.15
NPC1-207ENST00000588867 FBXO46Q6PJ61 603 aaPredicted RBP16.01■□□□□ 0.15
NPC1-207ENST00000588867 MTHFD1LQ6UB35 978 aa16.01■□□□□ 0.15
NPC1-207ENST00000588867 ZNF720Q7Z2F6 126 aa16.01■□□□□ 0.15
NPC1-207ENST00000588867 TCP11Q8WWU5 503 aa16.01■□□□□ 0.15
NPC1-207ENST00000588867 NELFBQ8WX92 580 aa16.01■□□□□ 0.15
NPC1-207ENST00000588867 BSNDQ8WZ55 320 aa16.01■□□□□ 0.15
NPC1-207ENST00000588867 EVPLQ92817 2033 aa16.01■□□□□ 0.15
NPC1-207ENST00000588867 NRCAMQ92823 1304 aa16.01■□□□□ 0.15
NPC1-207ENST00000588867 IGKV6-21A0A0C4DH24 114 aa16.01■□□□□ 0.15
NPC1-207ENST00000588867 K7ENM7 598 aa16.01■□□□□ 0.15
NPC1-207ENST00000588867 SLC16A4O15374 487 aa16.01■□□□□ 0.15
NPC1-207ENST00000588867 PRPF6O94906 941 aaKnown RBP16.01■□□□□ 0.15
NPC1-207ENST00000588867 CCL5P13501 91 aa16.01■□□□□ 0.15
NPC1-207ENST00000588867 ERCC5P28715 1186 aaPredicted RBP16.01■□□□□ 0.15
NPC1-207ENST00000588867 ARL2P36404 184 aa16.01■□□□□ 0.15
NPC1-207ENST00000588867 NPTX2P47972 431 aa16.01■□□□□ 0.15
NPC1-207ENST00000588867 CLCN3P51790 818 aa16.01■□□□□ 0.15
NPC1-207ENST00000588867 SMTNP53814 917 aa16.01■□□□□ 0.15
NPC1-207ENST00000588867 ZC2HC1CQ53FD0 456 aaPredicted RBP16.01■□□□□ 0.15
NPC1-207ENST00000588867 CT47A1Q5JQC4 288 aaPredicted RBP16.01■□□□□ 0.15
NPC1-207ENST00000588867 CCSAPQ6IQ19 270 aaPredicted RBP16.01■□□□□ 0.15
NPC1-207ENST00000588867 NELFCDQ8IXH7 590 aa16.01■□□□□ 0.15
NPC1-207ENST00000588867 GUF1Q8N442 669 aaKnown RBP16.01■□□□□ 0.15
NPC1-207ENST00000588867 LMBR1Q8WVP7 490 aa16.01■□□□□ 0.15
NPC1-207ENST00000588867 PRPF31Q8WWY3 499 aaKnown RBP16.01■□□□□ 0.15
NPC1-207ENST00000588867 DHTKD1Q96HY7 919 aaPredicted RBP16.01■□□□□ 0.15
NPC1-207ENST00000588867 DEFB118Q96PH6 123 aa16.01■□□□□ 0.15
NPC1-207ENST00000588867 BPIFA3Q9BQP9 254 aa16.01■□□□□ 0.15
NPC1-207ENST00000588867 C17orf75Q9HAS0 396 aa16.01■□□□□ 0.15
NPC1-207ENST00000588867 KMT5AQ9NQR1 393 aa16.01■□□□□ 0.15
NPC1-207ENST00000588867 HDAC6Q9UBN7 1215 aa16.01■□□□□ 0.15
NPC1-207ENST00000588867 GOLGA6L19H0YKK7 550 aa16■□□□□ 0.15
NPC1-207ENST00000588867 GAS2O43903 313 aaKnown RBP16■□□□□ 0.15
NPC1-207ENST00000588867 KIF20AO95235 890 aa16■□□□□ 0.15
NPC1-207ENST00000588867 PPP1R2P41236 205 aa16■□□□□ 0.15
NPC1-207ENST00000588867 MKRN4PQ13434 485 aaPredicted RBP16■□□□□ 0.15
NPC1-207ENST00000588867 IQCB1Q15051 598 aa16■□□□□ 0.15
NPC1-207ENST00000588867 NBPF20Q3BBV1 942 aa16■□□□□ 0.15
NPC1-207ENST00000588867 MARCH8Q5T0T0 291 aa16■□□□□ 0.15
NPC1-207ENST00000588867 KSR1Q8IVT5 923 aa16■□□□□ 0.15
NPC1-207ENST00000588867 DHX40Q8IX18 779 aaKnown RBP16■□□□□ 0.15
NPC1-207ENST00000588867 ARRDC4Q8NCT1 418 aa16■□□□□ 0.15
NPC1-207ENST00000588867 ASAP3Q8TDY4 903 aa16■□□□□ 0.15
NPC1-207ENST00000588867 SCFD1Q8WVM8 642 aa16■□□□□ 0.15
NPC1-207ENST00000588867 FIZ1Q96SL8 496 aa16■□□□□ 0.15
NPC1-207ENST00000588867 SUCLA2Q9P2R7 463 aaPredicted RBP16■□□□□ 0.15
NPC1-207ENST00000588867 SMTNL1A8MU46 457 aa15.99■□□□□ 0.15
NPC1-207ENST00000588867 GLRA2P23416 452 aa15.99■□□□□ 0.15
NPC1-207ENST00000588867 TMOD1P28289 359 aa15.99■□□□□ 0.15
NPC1-207ENST00000588867 ACLYP53396 1101 aa15.99■□□□□ 0.15
NPC1-207ENST00000588867 RTP1P59025 263 aa15.99■□□□□ 0.15
NPC1-207ENST00000588867 PKN2Q16513 984 aaKnown RBP15.99■□□□□ 0.15
NPC1-207ENST00000588867 COBLL1Q53SF7 1204 aa15.99■□□□□ 0.15
NPC1-207ENST00000588867 FAM47CQ5HY64 1035 aa15.99■□□□□ 0.15
NPC1-207ENST00000588867 NFRKBQ6P4R8 1299 aa15.99■□□□□ 0.15
NPC1-207ENST00000588867 STXBP4Q6ZWJ1 553 aa15.99■□□□□ 0.15
NPC1-207ENST00000588867 HAUS6Q7Z4H7 955 aa15.99■□□□□ 0.15
NPC1-207ENST00000588867 RHPN2Q8IUC4 686 aa15.99■□□□□ 0.15
NPC1-207ENST00000588867 PSPC1Q8WXF1 523 aaKnown RBP15.99■□□□□ 0.15
NPC1-207ENST00000588867 KIFC3Q9BVG8 833 aa15.99■□□□□ 0.15
NPC1-207ENST00000588867 RWDD2AQ9UIY3 292 aa15.99■□□□□ 0.15
NPC1-207ENST00000588867 PCDHB13Q9Y5F0 798 aa15.99■□□□□ 0.15
NPC1-207ENST00000588867 FSD2A1L4K1 749 aa15.99■□□□□ 0.15
NPC1-207ENST00000588867 C17orf102A2RUQ5 167 aa15.99■□□□□ 0.15
NPC1-207ENST00000588867 TRIM49BA6NDI0 452 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms