RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 TMEM266Q2M3C6 531 aa11.74□□□□□ -0.53
TPM4-209ENST00000588483 TTC38Q5R3I4 469 aa11.74□□□□□ -0.53
TPM4-209ENST00000588483 PLA2G4FQ68DD2 849 aa11.74□□□□□ -0.53
TPM4-209ENST00000588483 SLC24A5Q71RS6 500 aa11.74□□□□□ -0.53
TPM4-209ENST00000588483 OTUD6AQ7L8S5 288 aa11.74□□□□□ -0.53
TPM4-209ENST00000588483 CMTR2Q8IYT2 770 aaKnown RBP11.74□□□□□ -0.53
TPM4-209ENST00000588483 C4orf32Q8N8J7 132 aa11.74□□□□□ -0.53
TPM4-209ENST00000588483 SLC17A8Q8NDX2 589 aa11.74□□□□□ -0.53
TPM4-209ENST00000588483 SLC7A3Q8WY07 619 aa11.74□□□□□ -0.53
TPM4-209ENST00000588483 TRAIPQ9BWF2 469 aa11.74□□□□□ -0.53
TPM4-209ENST00000588483 ELAC1Q9H777 363 aaKnown RBP11.74□□□□□ -0.53
TPM4-209ENST00000588483 SUGCTQ9HAC7 445 aa11.74□□□□□ -0.53
TPM4-209ENST00000588483 ANKEF1Q9NU02 776 aa11.74□□□□□ -0.53
TPM4-209ENST00000588483 NOL7Q9UMY1 257 aaKnown RBP11.74□□□□□ -0.53
TPM4-209ENST00000588483 GINS2Q9Y248 185 aa11.74□□□□□ -0.53
TPM4-209ENST00000588483 RWDD3Q9Y3V2 267 aa11.74□□□□□ -0.53
TPM4-209ENST00000588483 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.74□□□□□ -0.53
TPM4-209ENST00000588483 POTEMA6NI47 508 aa11.73□□□□□ -0.53
TPM4-209ENST00000588483 LAD1O00515 517 aa11.73□□□□□ -0.53
TPM4-209ENST00000588483 GTPBP6O43824 516 aaPredicted RBP11.73□□□□□ -0.53
TPM4-209ENST00000588483 SPATA31C1P0DKV0 1188 aa11.73□□□□□ -0.53
TPM4-209ENST00000588483 MUTP22033 750 aa11.73□□□□□ -0.53
TPM4-209ENST00000588483 GJB2P29033 226 aa11.73□□□□□ -0.53
TPM4-209ENST00000588483 TOB1P50616 345 aaPredicted RBP11.73□□□□□ -0.53
TPM4-209ENST00000588483 FXR2P51116 673 aaKnown RBP eCLIP11.73□□□□□ -0.532e-7■□□□□ 10.7
TPM4-209ENST00000588483 CYP4A11Q02928 519 aa11.73□□□□□ -0.53
TPM4-209ENST00000588483 NFX1Q12986 1120 aaKnown RBP11.73□□□□□ -0.53
TPM4-209ENST00000588483 CTTNQ14247 550 aaKnown RBP11.73□□□□□ -0.53
TPM4-209ENST00000588483 EPC2Q52LR7 807 aa11.73□□□□□ -0.53
TPM4-209ENST00000588483 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.73□□□□□ -0.53
TPM4-209ENST00000588483 FIBCD1Q8N539 461 aa11.73□□□□□ -0.53
TPM4-209ENST00000588483 ZNF579Q8NAF0 562 aaKnown RBP11.73□□□□□ -0.53
TPM4-209ENST00000588483 CEP170P1Q96L14 293 aa11.73□□□□□ -0.53
TPM4-209ENST00000588483 ADAM2Q99965 735 aa11.73□□□□□ -0.53
TPM4-209ENST00000588483 SH2D3AQ9BRG2 576 aa11.73□□□□□ -0.53
TPM4-209ENST00000588483 C17orf80Q9BSJ5 609 aa11.73□□□□□ -0.53
TPM4-209ENST00000588483 POLR3CQ9BUI4 534 aaPredicted RBP11.73□□□□□ -0.53
TPM4-209ENST00000588483 CERS4Q9HA82 394 aa11.73□□□□□ -0.53
TPM4-209ENST00000588483 TUFT1Q9NNX1 390 aa11.73□□□□□ -0.53
TPM4-209ENST00000588483 BRWD1Q9NSI6 2320 aa11.73□□□□□ -0.53
TPM4-209ENST00000588483 TTC28Q96AY4 2481 aa11.72□□□□□ -0.53
TPM4-209ENST00000588483 KIAA1671Q9BY89 1806 aa11.72□□□□□ -0.53
TPM4-209ENST00000588483 DENND3A2RUS2 1198 aa11.72□□□□□ -0.53
TPM4-209ENST00000588483 H3BNC9 293 aa11.72□□□□□ -0.53
TPM4-209ENST00000588483 RFXAPO00287 272 aa11.72□□□□□ -0.53
TPM4-209ENST00000588483 ASAP2O43150 1006 aa11.72□□□□□ -0.53
TPM4-209ENST00000588483 DGAT1O75907 488 aa11.72□□□□□ -0.53
TPM4-209ENST00000588483 RB1P06400 928 aa11.72□□□□□ -0.53
TPM4-209ENST00000588483 IGFBP4P22692 258 aa11.72□□□□□ -0.53
TPM4-209ENST00000588483 RPA1P27694 616 aa11.72□□□□□ -0.53
TPM4-209ENST00000588483 PRPHP41219 470 aa11.72□□□□□ -0.53
TPM4-209ENST00000588483 RARRES1P49788 294 aa11.72□□□□□ -0.53
TPM4-209ENST00000588483 POLGP54098 1239 aaPredicted RBP11.72□□□□□ -0.53
TPM4-209ENST00000588483 POU5F1BQ06416 359 aa11.72□□□□□ -0.53
TPM4-209ENST00000588483 GNL2Q13823 731 aaKnown RBP11.72□□□□□ -0.53
TPM4-209ENST00000588483 PDIA5Q14554 519 aa11.72□□□□□ -0.53
TPM4-209ENST00000588483 EMC2Q15006 297 aa11.72□□□□□ -0.53
TPM4-209ENST00000588483 ZNF174Q15697 407 aa11.72□□□□□ -0.53
TPM4-209ENST00000588483 RILPL1Q5EBL4 403 aa11.72□□□□□ -0.53
TPM4-209ENST00000588483 TPH2Q8IWU9 490 aa11.72□□□□□ -0.53
TPM4-209ENST00000588483 TMEM192Q8IY95 271 aa11.72□□□□□ -0.53
TPM4-209ENST00000588483 IGSF22Q8N9C0 903 aa11.72□□□□□ -0.53
TPM4-209ENST00000588483 FBXO22Q8NEZ5 403 aa11.72□□□□□ -0.53
TPM4-209ENST00000588483 GDPD5Q8WTR4 605 aa11.72□□□□□ -0.53
TPM4-209ENST00000588483 TCP11Q8WWU5 503 aa11.72□□□□□ -0.53
TPM4-209ENST00000588483 NLRP7Q8WX94 980 aa11.72□□□□□ -0.53
TPM4-209ENST00000588483 PPP1R16BQ96T49 567 aa11.72□□□□□ -0.53
TPM4-209ENST00000588483 PLVAPQ9BX97 442 aa11.72□□□□□ -0.53
TPM4-209ENST00000588483 GCOM2Q9BZD3 368 aaPredicted RBP11.72□□□□□ -0.53
TPM4-209ENST00000588483 INO80BQ9C086 356 aaPredicted RBP11.72□□□□□ -0.53
TPM4-209ENST00000588483 IFT122Q9HBG6 1241 aa11.72□□□□□ -0.53
TPM4-209ENST00000588483 XPNPEP1Q9NQW7 623 aa11.72□□□□□ -0.53
TPM4-209ENST00000588483 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.72□□□□□ -0.53
TPM4-209ENST00000588483 CHST12Q9NRB3 414 aa11.72□□□□□ -0.53
TPM4-209ENST00000588483 TMEM161AQ9NX61 479 aa11.72□□□□□ -0.53
TPM4-209ENST00000588483 SUCLA2Q9P2R7 463 aaPredicted RBP11.72□□□□□ -0.53
TPM4-209ENST00000588483 COL4A3BPQ9Y5P4 624 aa11.72□□□□□ -0.53
TPM4-209ENST00000588483 ATG2AQ2TAZ0 1938 aa11.71□□□□□ -0.53
TPM4-209ENST00000588483 A0A087WZ62 844 aa11.71□□□□□ -0.53
TPM4-209ENST00000588483 ZBTB39O15060 712 aa11.71□□□□□ -0.53
TPM4-209ENST00000588483 ATP2B1P20020 1258 aa11.71□□□□□ -0.53
TPM4-209ENST00000588483 SFPQP23246 707 aaKnown RBP eCLIP11.71□□□□□ -0.53
TPM4-209ENST00000588483 BMPR1AP36894 532 aa11.71□□□□□ -0.53
TPM4-209ENST00000588483 PCBP1Q15365 356 aaKnown RBP eCLIP11.71□□□□□ -0.53
TPM4-209ENST00000588483 NAALADL2Q58DX5 795 aa11.71□□□□□ -0.53
TPM4-209ENST00000588483 XKR9Q5GH70 373 aa11.71□□□□□ -0.53
TPM4-209ENST00000588483 HAUS3Q68CZ6 603 aa11.71□□□□□ -0.53
TPM4-209ENST00000588483 FERMT3Q86UX7 667 aa11.71□□□□□ -0.53
TPM4-209ENST00000588483 CATSPER3Q86XQ3 398 aa11.71□□□□□ -0.53
TPM4-209ENST00000588483 IFNLR1Q8IU57 520 aaPredicted RBP11.71□□□□□ -0.53
TPM4-209ENST00000588483 RHPN2Q8IUC4 686 aa11.71□□□□□ -0.53
TPM4-209ENST00000588483 ERMNQ8TAM6 284 aa11.71□□□□□ -0.53
TPM4-209ENST00000588483 PSPC1Q8WXF1 523 aaKnown RBP11.71□□□□□ -0.53
TPM4-209ENST00000588483 RSPH1Q8WYR4 309 aa11.71□□□□□ -0.53
TPM4-209ENST00000588483 P2RX5Q93086 422 aa11.71□□□□□ -0.53
TPM4-209ENST00000588483 MTRQ99707 1265 aa11.71□□□□□ -0.53
TPM4-209ENST00000588483 FDXACB1Q9BRP7 624 aaPredicted RBP11.71□□□□□ -0.53
TPM4-209ENST00000588483 DBR1Q9UK59 544 aaKnown RBP11.71□□□□□ -0.53
TPM4-209ENST00000588483 SMC3Q9UQE7 1217 aa11.71□□□□□ -0.53
TPM4-209ENST00000588483 PCDHB6Q9Y5E3 794 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms