RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 OTOP1Q7RTM1 612 aa6.37□□□□□ -1.39
SDF2-206ENST00000587788 FBXO11Q86XK2 927 aa6.37□□□□□ -1.39
SDF2-206ENST00000587788 MCF2L2Q86YR7 1114 aa6.37□□□□□ -1.39
SDF2-206ENST00000587788 MNS1Q8NEH6 495 aa6.37□□□□□ -1.39
SDF2-206ENST00000587788 ZNF397Q8NF99 534 aaPredicted RBP6.37□□□□□ -1.39
SDF2-206ENST00000587788 RASGRP4Q8TDF6 673 aa6.37□□□□□ -1.39
SDF2-206ENST00000587788 GTF3C2Q8WUA4 911 aaPredicted RBP6.37□□□□□ -1.39
SDF2-206ENST00000587788 P2RX5Q93086 422 aa6.37□□□□□ -1.39
SDF2-206ENST00000587788 C12orf42Q96LP6 360 aa6.37□□□□□ -1.39
SDF2-206ENST00000587788 MTMR9Q96QG7 549 aa6.37□□□□□ -1.39
SDF2-206ENST00000587788 MKNK1Q9BUB5 465 aa6.37□□□□□ -1.39
SDF2-206ENST00000587788 TRIM9Q9C026 710 aa6.37□□□□□ -1.39
SDF2-206ENST00000587788 NT5C3AQ9H0P0 336 aa6.37□□□□□ -1.39
SDF2-206ENST00000587788 ZFYVE28Q9HCC9 887 aa6.37□□□□□ -1.39
SDF2-206ENST00000587788 ZCCHC17Q9NP64 241 aaKnown RBP6.37□□□□□ -1.39
SDF2-206ENST00000587788 ARGLU1Q9NWB6 273 aaPredicted RBP6.37□□□□□ -1.39
SDF2-206ENST00000587788 ZNHIT6Q9NWK9 470 aaKnown RBP6.37□□□□□ -1.39
SDF2-206ENST00000587788 OGFRQ9NZT2 677 aa6.37□□□□□ -1.39
SDF2-206ENST00000587788 LRWD1Q9UFC0 647 aa6.37□□□□□ -1.39
SDF2-206ENST00000587788 PRR12Q9ULL5 1215 aa6.37□□□□□ -1.39
SDF2-206ENST00000587788 AGTPBP1Q9UPW5 1226 aa6.37□□□□□ -1.39
SDF2-206ENST00000587788 MRPL11Q9Y3B7 192 aaKnown RBP6.37□□□□□ -1.39
SDF2-206ENST00000587788 RABGAP1Q9Y3P9 1069 aa6.37□□□□□ -1.39
SDF2-206ENST00000587788 CTDP1Q9Y5B0 961 aaPredicted RBP6.37□□□□□ -1.39
SDF2-206ENST00000587788 PCDHA1Q9Y5I3 950 aa6.37□□□□□ -1.39
SDF2-206ENST00000587788 DNMT3AQ9Y6K1 912 aaPredicted RBP6.37□□□□□ -1.39
SDF2-206ENST00000587788 LCTP09848 1927 aa6.37□□□□□ -1.39
SDF2-206ENST00000587788 FRMPD2Q68DX3 1309 aaPredicted RBP6.36□□□□□ -1.39
SDF2-206ENST00000587788 TBX3O15119 743 aa6.36□□□□□ -1.39
SDF2-206ENST00000587788 TEX33O43247 280 aa6.36□□□□□ -1.39
SDF2-206ENST00000587788 MARCH6O60337 910 aa6.36□□□□□ -1.39
SDF2-206ENST00000587788 TUBBP07437 444 aa6.36□□□□□ -1.39
SDF2-206ENST00000587788 BCRP11274 1271 aa6.36□□□□□ -1.39
SDF2-206ENST00000587788 NPR3P17342 541 aa6.36□□□□□ -1.39
SDF2-206ENST00000587788 GPC1P35052 558 aa6.36□□□□□ -1.39
SDF2-206ENST00000587788 OAZ1P54368 228 aa6.36□□□□□ -1.39
SDF2-206ENST00000587788 ADKP55263 362 aaKnown RBP6.36□□□□□ -1.39
SDF2-206ENST00000587788 GNG11P61952 73 aa6.36□□□□□ -1.39
SDF2-206ENST00000587788 ASIC1P78348 528 aa6.36□□□□□ -1.39
SDF2-206ENST00000587788 SP3Q02447 781 aa6.36□□□□□ -1.39
SDF2-206ENST00000587788 CENPCQ03188 943 aa6.36□□□□□ -1.39
SDF2-206ENST00000587788 UBXN1Q04323 297 aa6.36□□□□□ -1.39
SDF2-206ENST00000587788 LRRC63Q05C16 580 aa6.36□□□□□ -1.39
SDF2-206ENST00000587788 PABPC4Q13310 644 aaKnown RBP eCLIP6.36□□□□□ -1.395e-6■□□□□ 10.8
SDF2-206ENST00000587788 AP3B2Q13367 1082 aa6.36□□□□□ -1.39
SDF2-206ENST00000587788 ZNF211Q13398 564 aaPredicted RBP6.36□□□□□ -1.39
SDF2-206ENST00000587788 TEAD4Q15561 434 aa6.36□□□□□ -1.39
SDF2-206ENST00000587788 FIGNQ5HY92 759 aa6.36□□□□□ -1.39
SDF2-206ENST00000587788 JAKMIP3Q5VZ66 844 aa6.36□□□□□ -1.39
SDF2-206ENST00000587788 TTI2Q6NXR4 508 aa6.36□□□□□ -1.39
SDF2-206ENST00000587788 CATSPERGQ6ZRH7 1159 aa6.36□□□□□ -1.39
SDF2-206ENST00000587788 ZNF662Q6ZS27 426 aa6.36□□□□□ -1.39
SDF2-206ENST00000587788 UNC13DQ70J99 1090 aa6.36□□□□□ -1.39
SDF2-206ENST00000587788 CTU1Q7Z7A3 348 aaKnown RBP6.36□□□□□ -1.39
SDF2-206ENST00000587788 SLFN12Q8IYM2 578 aa6.36□□□□□ -1.39
SDF2-206ENST00000587788 SMYD4Q8IYR2 804 aaPredicted RBP6.36□□□□□ -1.39
SDF2-206ENST00000587788 TXLNBQ8N3L3 684 aa6.36□□□□□ -1.39
SDF2-206ENST00000587788 CSGALNACT2Q8N6G5 542 aa6.36□□□□□ -1.39
SDF2-206ENST00000587788 MB21D1Q8N884 522 aa6.36□□□□□ -1.39
SDF2-206ENST00000587788 OR8K1Q8NGG5 319 aa6.36□□□□□ -1.39
SDF2-206ENST00000587788 HELQQ8TDG4 1101 aa6.36□□□□□ -1.39
SDF2-206ENST00000587788 ZDHHC1Q8WTX9 485 aa6.36□□□□□ -1.39
SDF2-206ENST00000587788 UBXN4Q92575 508 aa6.36□□□□□ -1.39
SDF2-206ENST00000587788 ABHD8Q96I13 439 aa6.36□□□□□ -1.39
SDF2-206ENST00000587788 TRIM47Q96LD4 638 aa6.36□□□□□ -1.39
SDF2-206ENST00000587788 NUP88Q99567 741 aaPredicted RBP6.36□□□□□ -1.39
SDF2-206ENST00000587788 SLF1Q9BQI6 1058 aa6.36□□□□□ -1.39
SDF2-206ENST00000587788 ASCC2Q9H1I8 757 aaPredicted RBP6.36□□□□□ -1.39
SDF2-206ENST00000587788 BIN2Q9UBW5 565 aaPredicted RBP6.36□□□□□ -1.39
SDF2-206ENST00000587788 ZNF215Q9UL58 517 aaPredicted RBP6.36□□□□□ -1.39
SDF2-206ENST00000587788 CAPN11Q9UMQ6 739 aa6.36□□□□□ -1.39
SDF2-206ENST00000587788 ADAMTS5Q9UNA0 930 aa6.36□□□□□ -1.39
SDF2-206ENST00000587788 LUC7L2Q9Y383 392 aaKnown RBP6.36□□□□□ -1.39
SDF2-206ENST00000587788 ZNF236Q9UL36 1845 aa6.36□□□□□ -1.39
SDF2-206ENST00000587788 MCM3APO60318 1980 aa6.35□□□□□ -1.39
SDF2-206ENST00000587788 MYPNQ86TC9 1320 aa6.35□□□□□ -1.39
SDF2-206ENST00000587788 CYP3A7-CYP3A51PA0A087WV96 503 aa6.35□□□□□ -1.39
SDF2-206ENST00000587788 A0A1W2PQJ5 194 aa6.35□□□□□ -1.39
SDF2-206ENST00000587788 EML1O00423 815 aa6.35□□□□□ -1.39
SDF2-206ENST00000587788 ATP2A1O14983 1001 aa6.35□□□□□ -1.39
SDF2-206ENST00000587788 ADAMTS3O15072 1205 aa6.35□□□□□ -1.39
SDF2-206ENST00000587788 SPINT1O43278 529 aa6.35□□□□□ -1.39
SDF2-206ENST00000587788 ATP8B1O43520 1251 aa6.35□□□□□ -1.39
SDF2-206ENST00000587788 URI1O94763 535 aaPredicted RBP6.35□□□□□ -1.39
SDF2-206ENST00000587788 AVPP01185 164 aa6.35□□□□□ -1.39
SDF2-206ENST00000587788 GYPCP04921 128 aa6.35□□□□□ -1.39
SDF2-206ENST00000587788 VCAM1P19320 739 aa6.35□□□□□ -1.39
SDF2-206ENST00000587788 CYP3A7P24462 503 aa6.35□□□□□ -1.39
SDF2-206ENST00000587788 CASP1P29466 404 aa6.35□□□□□ -1.39
SDF2-206ENST00000587788 CASP14P31944 242 aa6.35□□□□□ -1.39
SDF2-206ENST00000587788 TECP42680 631 aa6.35□□□□□ -1.39
SDF2-206ENST00000587788 TXKP42681 527 aa6.35□□□□□ -1.39
SDF2-206ENST00000587788 FAM193AP78312 1265 aa6.35□□□□□ -1.39
SDF2-206ENST00000587788 KRT83P78385 493 aa6.35□□□□□ -1.39
SDF2-206ENST00000587788 LACTBP83111 547 aaPredicted RBP6.35□□□□□ -1.39
SDF2-206ENST00000587788 CDK17Q00537 523 aa6.35□□□□□ -1.39
SDF2-206ENST00000587788 RELBQ01201 579 aa6.35□□□□□ -1.39
SDF2-206ENST00000587788 CDC37Q16543 378 aaPredicted RBP6.35□□□□□ -1.39
SDF2-206ENST00000587788 QRICH1Q2TAL8 776 aa6.35□□□□□ -1.39
SDF2-206ENST00000587788 TKFCQ3LXA3 575 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms