RNA–Protein interactions for RNA: ENST00000587509.5

PRKCSH-206, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-206ENST00000587509 RGL1Q9NZL6 768 aa13.08□□□□□ -0.32
PRKCSH-206ENST00000587509 ST3GAL5Q9UNP4 418 aa13.08□□□□□ -0.32
PRKCSH-206ENST00000587509 NOC2LQ9Y3T9 749 aaKnown RBP13.08□□□□□ -0.32
PRKCSH-206ENST00000587509 PCDHB7Q9Y5E2 793 aa13.08□□□□□ -0.32
PRKCSH-206ENST00000587509 COL4A3BPQ9Y5P4 624 aa13.08□□□□□ -0.32
PRKCSH-206ENST00000587509 LCHNA4D1U4 455 aa13.07□□□□□ -0.32
PRKCSH-206ENST00000587509 CD2BP2O95400 341 aaKnown RBP13.07□□□□□ -0.32
PRKCSH-206ENST00000587509 SKIP12755 728 aa13.07□□□□□ -0.32
PRKCSH-206ENST00000587509 XRCC6P12956 609 aaKnown RBP eCLIP13.07□□□□□ -0.32
PRKCSH-206ENST00000587509 PRPHP41219 470 aa13.07□□□□□ -0.32
PRKCSH-206ENST00000587509 PHKA2P46019 1235 aa13.07□□□□□ -0.32
PRKCSH-206ENST00000587509 FXR2P51116 673 aaKnown RBP eCLIP13.07□□□□□ -0.32
PRKCSH-206ENST00000587509 NCBP1Q09161 790 aaKnown RBP13.07□□□□□ -0.32
PRKCSH-206ENST00000587509 FAM228AQ86W67 206 aa13.07□□□□□ -0.32
PRKCSH-206ENST00000587509 ABI1Q8IZP0 508 aa13.07□□□□□ -0.32
PRKCSH-206ENST00000587509 SLC17A8Q8NDX2 589 aa13.07□□□□□ -0.32
PRKCSH-206ENST00000587509 MCPH1Q8NEM0 835 aa13.07□□□□□ -0.32
PRKCSH-206ENST00000587509 TMEM40Q8WWA1 233 aa13.07□□□□□ -0.32
PRKCSH-206ENST00000587509 NACC1Q96RE7 527 aa13.07□□□□□ -0.32
PRKCSH-206ENST00000587509 ADAM2Q99965 735 aa13.07□□□□□ -0.32
PRKCSH-206ENST00000587509 HSD17B14Q9BPX1 270 aa13.07□□□□□ -0.32
PRKCSH-206ENST00000587509 C11orf84Q9BUA3 381 aaPredicted RBP13.07□□□□□ -0.32
PRKCSH-206ENST00000587509 POLR3CQ9BUI4 534 aaPredicted RBP13.07□□□□□ -0.32
PRKCSH-206ENST00000587509 ADAMTS10Q9H324 1103 aa13.07□□□□□ -0.32
PRKCSH-206ENST00000587509 DHX33Q9H6R0 707 aaKnown RBP13.07□□□□□ -0.32
PRKCSH-206ENST00000587509 CERS4Q9HA82 394 aa13.07□□□□□ -0.32
PRKCSH-206ENST00000587509 CHST12Q9NRB3 414 aa13.07□□□□□ -0.32
PRKCSH-206ENST00000587509 LMCD1Q9NZU5 365 aa13.07□□□□□ -0.32
PRKCSH-206ENST00000587509 MTUS1Q9ULD2 1270 aa13.07□□□□□ -0.32
PRKCSH-206ENST00000587509 PTPRSQ13332 1948 aa13.07□□□□□ -0.32
PRKCSH-206ENST00000587509 CARNS1A5YM72 827 aa13.06□□□□□ -0.32
PRKCSH-206ENST00000587509 TMEM150BA6NC51 233 aa13.06□□□□□ -0.32
PRKCSH-206ENST00000587509 K7ELQ4 463 aaPredicted RBP13.06□□□□□ -0.32
PRKCSH-206ENST00000587509 STBD1O95210 358 aa13.06□□□□□ -0.32
PRKCSH-206ENST00000587509 CTNNB1P35222 781 aa13.06□□□□□ -0.32
PRKCSH-206ENST00000587509 TECP42680 631 aa13.06□□□□□ -0.32
PRKCSH-206ENST00000587509 RAB27AP51159 221 aa13.06□□□□□ -0.32
PRKCSH-206ENST00000587509 NPEPPSP55786 919 aa13.06□□□□□ -0.32
PRKCSH-206ENST00000587509 TIGD5Q53EQ6 642 aa13.06□□□□□ -0.32
PRKCSH-206ENST00000587509 KRT79Q5XKE5 535 aa13.06□□□□□ -0.32
PRKCSH-206ENST00000587509 DTHD1Q6ZMT9 781 aa13.06□□□□□ -0.32
PRKCSH-206ENST00000587509 CATSPER4Q7RTX7 472 aa13.06□□□□□ -0.32
PRKCSH-206ENST00000587509 HSCBQ8IWL3 235 aa13.06□□□□□ -0.32
PRKCSH-206ENST00000587509 MICALL1Q8N3F8 863 aa13.06□□□□□ -0.32
PRKCSH-206ENST00000587509 INTS4Q96HW7 963 aaKnown RBP13.06□□□□□ -0.32
PRKCSH-206ENST00000587509 PLVAPQ9BX97 442 aa13.06□□□□□ -0.32
PRKCSH-206ENST00000587509 OSBPL7Q9BZF2 842 aa13.06□□□□□ -0.32
PRKCSH-206ENST00000587509 TMEM60Q9H2L4 133 aa13.06□□□□□ -0.32
PRKCSH-206ENST00000587509 ELAC1Q9H777 363 aaKnown RBP13.06□□□□□ -0.32
PRKCSH-206ENST00000587509 AAASQ9NRG9 546 aa13.06□□□□□ -0.32
PRKCSH-206ENST00000587509 RGS18Q9NS28 235 aa13.06□□□□□ -0.32
PRKCSH-206ENST00000587509 TMEM161AQ9NX61 479 aa13.06□□□□□ -0.32
PRKCSH-206ENST00000587509 LRWD1Q9UFC0 647 aa13.06□□□□□ -0.32
PRKCSH-206ENST00000587509 EVPLQ92817 2033 aa13.06□□□□□ -0.32
PRKCSH-206ENST00000587509 MYO9BQ13459 2157 aa13.05□□□□□ -0.32
PRKCSH-206ENST00000587509 ARHGEF35A5YM69 484 aa13.05□□□□□ -0.32
PRKCSH-206ENST00000587509 DGKIO75912 1065 aa13.05□□□□□ -0.32
PRKCSH-206ENST00000587509 ERLIN2O94905 339 aa13.05□□□□□ -0.32
PRKCSH-206ENST00000587509 SLITRK3O94933 977 aa13.05□□□□□ -0.32
PRKCSH-206ENST00000587509 RB1P06400 928 aa13.05□□□□□ -0.32
PRKCSH-206ENST00000587509 HSP90AA1P07900 732 aaKnown RBP13.05□□□□□ -0.32
PRKCSH-206ENST00000587509 POU3F3P20264 500 aaPredicted RBP13.05□□□□□ -0.32
PRKCSH-206ENST00000587509 IBSPP21815 317 aaPredicted RBP13.05□□□□□ -0.32
PRKCSH-206ENST00000587509 RPA1P27694 616 aa13.05□□□□□ -0.32
PRKCSH-206ENST00000587509 CCT6AP40227 531 aaKnown RBP13.05□□□□□ -0.32
PRKCSH-206ENST00000587509 RARRES1P49788 294 aa13.05□□□□□ -0.32
PRKCSH-206ENST00000587509 PTGDRQ13258 359 aa13.05□□□□□ -0.32
PRKCSH-206ENST00000587509 CUL4AQ13619 759 aa13.05□□□□□ -0.32
PRKCSH-206ENST00000587509 CSPP1Q1MSJ5 1256 aa13.05□□□□□ -0.32
PRKCSH-206ENST00000587509 SRGAP1Q7Z6B7 1085 aa13.05□□□□□ -0.32
PRKCSH-206ENST00000587509 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.05□□□□□ -0.322e-8■■□□□ 11.7
PRKCSH-206ENST00000587509 SNX29Q8TEQ0 813 aa13.05□□□□□ -0.32
PRKCSH-206ENST00000587509 GDPD5Q8WTR4 605 aa13.05□□□□□ -0.32
PRKCSH-206ENST00000587509 LINC01599Q8WXQ3 324 aa13.05□□□□□ -0.32
PRKCSH-206ENST00000587509 CEP89Q96ST8 783 aa13.05□□□□□ -0.32
PRKCSH-206ENST00000587509 SH2D3AQ9BRG2 576 aa13.05□□□□□ -0.32
PRKCSH-206ENST00000587509 TMX1Q9H3N1 280 aa13.05□□□□□ -0.32
PRKCSH-206ENST00000587509 WRAP73Q9P2S5 460 aaPredicted RBP13.05□□□□□ -0.32
PRKCSH-206ENST00000587509 DBR1Q9UK59 544 aaKnown RBP13.05□□□□□ -0.32
PRKCSH-206ENST00000587509 PIN4Q9Y237 131 aaKnown RBP13.05□□□□□ -0.32
PRKCSH-206ENST00000587509 COL4A4P53420 1690 aaPredicted RBP13.05□□□□□ -0.32
PRKCSH-206ENST00000587509 TTC3P53804 2025 aa13.05□□□□□ -0.32
PRKCSH-206ENST00000587509 A0A087WZ62 844 aa13.04□□□□□ -0.32
PRKCSH-206ENST00000587509 VPS37CA5D8V6 355 aaPredicted RBP13.04□□□□□ -0.32
PRKCSH-206ENST00000587509 WNT7AO00755 349 aa13.04□□□□□ -0.32
PRKCSH-206ENST00000587509 PDIA4P13667 645 aaKnown RBP13.04□□□□□ -0.32
PRKCSH-206ENST00000587509 LAMTOR4Q0VGL1 99 aa13.04□□□□□ -0.32
PRKCSH-206ENST00000587509 GRB10Q13322 594 aa13.04□□□□□ -0.32
PRKCSH-206ENST00000587509 PDIA5Q14554 519 aa13.04□□□□□ -0.32
PRKCSH-206ENST00000587509 SKIV2LQ15477 1246 aaKnown RBP13.04□□□□□ -0.32
PRKCSH-206ENST00000587509 EPC2Q52LR7 807 aa13.04□□□□□ -0.32
PRKCSH-206ENST00000587509 NAALADL2Q58DX5 795 aa13.04□□□□□ -0.32
PRKCSH-206ENST00000587509 ARL6IP4Q66PJ3 421 aaKnown RBP13.04□□□□□ -0.32
PRKCSH-206ENST00000587509 TWF2Q6IBS0 349 aaKnown RBP13.04□□□□□ -0.32
PRKCSH-206ENST00000587509 FERMT3Q86UX7 667 aa13.04□□□□□ -0.32
PRKCSH-206ENST00000587509 TMEM192Q8IY95 271 aa13.04□□□□□ -0.32
PRKCSH-206ENST00000587509 LRRC43Q8N309 656 aa13.04□□□□□ -0.32
PRKCSH-206ENST00000587509 KCTD17Q8N5Z5 321 aa13.04□□□□□ -0.32
PRKCSH-206ENST00000587509 RNF149Q8NC42 400 aa13.04□□□□□ -0.32
PRKCSH-206ENST00000587509 PPP2R3CQ969Q6 453 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms