RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 DUSP8Q13202 625 aa6.19□□□□□ -1.42
VMP1-205ENST00000587470 CRIP3Q6Q6R5 217 aa6.19□□□□□ -1.42
VMP1-205ENST00000587470 ZNF747Q9BV97 191 aa6.19□□□□□ -1.42
VMP1-205ENST00000587470 PLA2G12BQ9BX93 195 aa6.19□□□□□ -1.42
VMP1-205ENST00000587470 NELFAQ9H3P2 528 aa6.19□□□□□ -1.42
VMP1-205ENST00000587470 FAM184BQ9ULE4 1060 aa6.19□□□□□ -1.42
VMP1-205ENST00000587470 VWA7Q9Y334 891 aa6.19□□□□□ -1.42
VMP1-205ENST00000587470 SHROOM2Q13796 1616 aa6.18□□□□□ -1.42
VMP1-205ENST00000587470 PRG4Q92954 1404 aaPredicted RBP6.18□□□□□ -1.42
VMP1-205ENST00000587470 GRIN2AQ12879 1464 aa6.18□□□□□ -1.42
VMP1-205ENST00000587470 PTPDC1A2A3K4 754 aa6.18□□□□□ -1.42
VMP1-205ENST00000587470 PMS2P1A4D2B8 440 aa6.18□□□□□ -1.42
VMP1-205ENST00000587470 TRAF5O00463 557 aa6.18□□□□□ -1.42
VMP1-205ENST00000587470 DVL2O14641 736 aa6.18□□□□□ -1.42
VMP1-205ENST00000587470 PPP1R12AO14974 1030 aaPredicted RBP6.18□□□□□ -1.42
VMP1-205ENST00000587470 RFPL3O75679 317 aa6.18□□□□□ -1.42
VMP1-205ENST00000587470 FSHBP01225 129 aa6.18□□□□□ -1.42
VMP1-205ENST00000587470 CYP17A1P05093 508 aa6.18□□□□□ -1.42
VMP1-205ENST00000587470 ACO1P21399 889 aaKnown RBP6.18□□□□□ -1.42
VMP1-205ENST00000587470 ROM1Q03395 351 aa6.18□□□□□ -1.42
VMP1-205ENST00000587470 HGFACQ04756 655 aa6.18□□□□□ -1.42
VMP1-205ENST00000587470 ZNF174Q15697 407 aa6.18□□□□□ -1.42
VMP1-205ENST00000587470 CCDC144BQ3MJ40 725 aa6.18□□□□□ -1.42
VMP1-205ENST00000587470 Q6ZSN1 163 aa6.18□□□□□ -1.42
VMP1-205ENST00000587470 UBE2R2Q712K3 238 aaPredicted RBP6.18□□□□□ -1.42
VMP1-205ENST00000587470 SLC16A11Q8NCK7 471 aa6.18□□□□□ -1.42
VMP1-205ENST00000587470 FAM89AQ96GI7 184 aa6.18□□□□□ -1.42
VMP1-205ENST00000587470 VPS11Q9H270 941 aa6.18□□□□□ -1.42
VMP1-205ENST00000587470 KANSL2Q9H9L4 492 aa6.18□□□□□ -1.42
VMP1-205ENST00000587470 TMEM260Q9NX78 707 aa6.18□□□□□ -1.42
VMP1-205ENST00000587470 ABCA10Q8WWZ4 1543 aa6.18□□□□□ -1.42
VMP1-205ENST00000587470 BIVM-ERCC5R4GMW8 1640 aa6.17□□□□□ -1.42
VMP1-205ENST00000587470 NUP160Q12769 1436 aa6.17□□□□□ -1.42
VMP1-205ENST00000587470 SLC6A3Q01959 620 aa6.17□□□□□ -1.42
VMP1-205ENST00000587470 ZNF460Q14592 562 aa6.17□□□□□ -1.42
VMP1-205ENST00000587470 PIK3R6Q5UE93 754 aa6.17□□□□□ -1.42
VMP1-205ENST00000587470 BCL6BQ8N143 479 aaPredicted RBP6.17□□□□□ -1.42
VMP1-205ENST00000587470 SYNPOQ8N3V7 929 aa6.17□□□□□ -1.42
VMP1-205ENST00000587470 OR14K1Q8NGZ2 314 aa6.17□□□□□ -1.42
VMP1-205ENST00000587470 LPPQ93052 612 aa6.17□□□□□ -1.42
VMP1-205ENST00000587470 MAML3Q96JK9 1138 aa6.17□□□□□ -1.42
VMP1-205ENST00000587470 SCAND2PQ9GZW5 306 aaPredicted RBP6.17□□□□□ -1.42
VMP1-205ENST00000587470 PCIF1Q9H4Z3 704 aa6.17□□□□□ -1.42
VMP1-205ENST00000587470 B4GALT6Q9UBX8 382 aa6.17□□□□□ -1.42
VMP1-205ENST00000587470 SRRDQ9UH36 339 aa6.17□□□□□ -1.42
VMP1-205ENST00000587470 PBRM1Q86U86 1689 aa6.17□□□□□ -1.42
VMP1-205ENST00000587470 H7C1D1 291 aa6.16□□□□□ -1.42
VMP1-205ENST00000587470 FZD7O75084 574 aa6.16□□□□□ -1.42
VMP1-205ENST00000587470 ASMTLO95671 621 aa6.16□□□□□ -1.42
VMP1-205ENST00000587470 PRLP01236 227 aa6.16□□□□□ -1.42
VMP1-205ENST00000587470 JMJD7P0C870 316 aa6.16□□□□□ -1.42
VMP1-205ENST00000587470 SDSP20132 328 aa6.16□□□□□ -1.42
VMP1-205ENST00000587470 GDF5P43026 501 aa6.16□□□□□ -1.42
VMP1-205ENST00000587470 SESN2P58004 480 aaPredicted RBP6.16□□□□□ -1.42
VMP1-205ENST00000587470 MAMDC4Q6UXC1 1216 aa6.16□□□□□ -1.42
VMP1-205ENST00000587470 NME9Q86XW9 330 aa6.16□□□□□ -1.42
VMP1-205ENST00000587470 INTS7Q9NVH2 962 aaKnown RBP6.16□□□□□ -1.42
VMP1-205ENST00000587470 PLA2G3Q9NZ20 509 aa6.16□□□□□ -1.42
VMP1-205ENST00000587470 SAE1Q9UBE0 346 aaPredicted RBP6.16□□□□□ -1.42
VMP1-205ENST00000587470 UBA6A0AVT1 1052 aaPredicted RBP6.15□□□□□ -1.42
VMP1-205ENST00000587470 CBX4O00257 560 aa6.15□□□□□ -1.42
VMP1-205ENST00000587470 SLC26A4O43511 780 aa6.15□□□□□ -1.42
VMP1-205ENST00000587470 H2AFYO75367 372 aaKnown RBP6.15□□□□□ -1.42
VMP1-205ENST00000587470 RGS3P49796 1198 aa6.15□□□□□ -1.42
VMP1-205ENST00000587470 FOXL1Q12952 345 aa6.15□□□□□ -1.42
VMP1-205ENST00000587470 PABPC4Q13310 644 aaKnown RBP eCLIP6.15□□□□□ -1.42
VMP1-205ENST00000587470 ADAM15Q13444 863 aa6.15□□□□□ -1.42
VMP1-205ENST00000587470 FOXE3Q13461 319 aa6.15□□□□□ -1.42
VMP1-205ENST00000587470 GRM7Q14831 915 aa6.15□□□□□ -1.42
VMP1-205ENST00000587470 CFAP100Q494V2 611 aa6.15□□□□□ -1.42
VMP1-205ENST00000587470 TTC38Q5R3I4 469 aa6.15□□□□□ -1.42
VMP1-205ENST00000587470 CDCA2Q69YH5 1023 aaPredicted RBP6.15□□□□□ -1.42
VMP1-205ENST00000587470 KLHDC10Q6PID8 442 aa6.15□□□□□ -1.42
VMP1-205ENST00000587470 USP51Q70EK9 711 aa6.15□□□□□ -1.42
VMP1-205ENST00000587470 GPR135Q8IZ08 494 aa6.15□□□□□ -1.42
VMP1-205ENST00000587470 KIAA1958Q8N8K9 716 aa6.15□□□□□ -1.42
VMP1-205ENST00000587470 GFM2Q969S9 779 aaKnown RBP6.15□□□□□ -1.42
VMP1-205ENST00000587470 C16orf92Q96LL3 132 aa6.15□□□□□ -1.42
VMP1-205ENST00000587470 MAGEC2Q9UBF1 373 aaPredicted RBP6.15□□□□□ -1.42
VMP1-205ENST00000587470 CTDP1Q9Y5B0 961 aaPredicted RBP6.15□□□□□ -1.42
VMP1-205ENST00000587470 MSX2P35548 267 aaPredicted RBP6.14□□□□□ -1.43
VMP1-205ENST00000587470 ACVRL1P37023 503 aa6.14□□□□□ -1.43
VMP1-205ENST00000587470 NRN1LQ496H8 165 aa6.14□□□□□ -1.43
VMP1-205ENST00000587470 USP39Q53GS9 565 aaKnown RBP6.14□□□□□ -1.43
VMP1-205ENST00000587470 SLFN12LQ6IEE8 588 aa6.14□□□□□ -1.43
VMP1-205ENST00000587470 RNF207Q6ZRF8 634 aa6.14□□□□□ -1.43
VMP1-205ENST00000587470 ADGRE4PQ86SQ3 457 aa6.14□□□□□ -1.43
VMP1-205ENST00000587470 SHCBP1Q8NEM2 672 aa6.14□□□□□ -1.43
VMP1-205ENST00000587470 SORCS2Q96PQ0 1159 aa6.14□□□□□ -1.43
VMP1-205ENST00000587470 ORAI3Q9BRQ5 295 aa6.14□□□□□ -1.43
VMP1-205ENST00000587470 KCMF1Q9P0J7 381 aa6.14□□□□□ -1.43
VMP1-205ENST00000587470 CYR61O00622 381 aa6.13□□□□□ -1.43
VMP1-205ENST00000587470 SLPIP03973 132 aa6.13□□□□□ -1.43
VMP1-205ENST00000587470 PTX3P26022 381 aaPredicted RBP6.13□□□□□ -1.43
VMP1-205ENST00000587470 HHEXQ03014 270 aa6.13□□□□□ -1.43
VMP1-205ENST00000587470 ADCY1Q08828 1119 aa6.13□□□□□ -1.43
VMP1-205ENST00000587470 EPHA7Q15375 998 aa6.13□□□□□ -1.43
VMP1-205ENST00000587470 TCEA2Q15560 299 aa6.13□□□□□ -1.43
VMP1-205ENST00000587470 DGKDQ16760 1214 aa6.13□□□□□ -1.43
VMP1-205ENST00000587470 RABGGTAQ92696 567 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms