RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 EPB41P11171 864 aaKnown RBP21.8■■□□□ 1.08
TRIM47-204ENST00000587339 KRT9P35527 623 aa21.8■■□□□ 1.08
TRIM47-204ENST00000587339 GTF2BQ00403 316 aa21.8■■□□□ 1.08
TRIM47-204ENST00000587339 ACCSQ96QU6 501 aa21.8■■□□□ 1.08
TRIM47-204ENST00000587339 NAA15Q9BXJ9 866 aaKnown RBP21.8■■□□□ 1.08
TRIM47-204ENST00000587339 NIFKQ9BYG3 293 aaKnown RBP21.8■■□□□ 1.08
TRIM47-204ENST00000587339 VTA1Q9NP79 307 aa21.8■■□□□ 1.08
TRIM47-204ENST00000587339 XPNPEP1Q9NQW7 623 aa21.8■■□□□ 1.08
TRIM47-204ENST00000587339 NRBP2Q9NSY0 501 aa21.8■■□□□ 1.08
TRIM47-204ENST00000587339 LUC7L2Q9Y383 392 aaKnown RBP21.8■■□□□ 1.08
TRIM47-204ENST00000587339 MCM3APO60318 1980 aa21.79■■□□□ 1.08
TRIM47-204ENST00000587339 MYH9P35579 1960 aaKnown RBP21.79■■□□□ 1.08
TRIM47-204ENST00000587339 RNF225M0QZC1 329 aaPredicted RBP21.79■■□□□ 1.08
TRIM47-204ENST00000587339 NPTX2P47972 431 aa21.79■■□□□ 1.08
TRIM47-204ENST00000587339 KLK7P49862 253 aa21.79■■□□□ 1.08
TRIM47-204ENST00000587339 DNTTIP2Q5QJE6 756 aaKnown RBP21.79■■□□□ 1.08
TRIM47-204ENST00000587339 E4F1Q66K89 784 aaPredicted RBP21.79■■□□□ 1.08
TRIM47-204ENST00000587339 GLG1Q92896 1179 aa21.79■■□□□ 1.08
TRIM47-204ENST00000587339 METTL14Q9HCE5 456 aaKnown RBP21.79■■□□□ 1.08
TRIM47-204ENST00000587339 KCND1Q9NSA2 647 aa21.79■■□□□ 1.08
TRIM47-204ENST00000587339 CAPN11Q9UMQ6 739 aa21.79■■□□□ 1.08
TRIM47-204ENST00000587339 DIS3Q9Y2L1 958 aaKnown RBP21.79■■□□□ 1.08
TRIM47-204ENST00000587339 ARID2Q68CP9 1835 aa21.79■■□□□ 1.08
TRIM47-204ENST00000587339 SLC10A3P09131 477 aa21.78■■□□□ 1.08
TRIM47-204ENST00000587339 CASP4P49662 377 aa21.78■■□□□ 1.08
TRIM47-204ENST00000587339 SOX10P56693 466 aa21.78■■□□□ 1.08
TRIM47-204ENST00000587339 INHBEP58166 350 aa21.78■■□□□ 1.08
TRIM47-204ENST00000587339 RTP1P59025 263 aa21.78■■□□□ 1.08
TRIM47-204ENST00000587339 MAMDC4Q6UXC1 1216 aa21.78■■□□□ 1.08
TRIM47-204ENST00000587339 CCAR2Q8N163 923 aaKnown RBP21.78■■□□□ 1.08
TRIM47-204ENST00000587339 SLC7A3Q8WY07 619 aa21.78■■□□□ 1.08
TRIM47-204ENST00000587339 COPS5Q92905 334 aa21.78■■□□□ 1.08
TRIM47-204ENST00000587339 NTPCRQ9BSD7 190 aaKnown RBP21.78■■□□□ 1.08
TRIM47-204ENST00000587339 GPBP1L1Q9HC44 474 aaPredicted RBP21.78■■□□□ 1.08
TRIM47-204ENST00000587339 KMT5AQ9NQR1 393 aa21.78■■□□□ 1.08
TRIM47-204ENST00000587339 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.78■■□□□ 1.08
TRIM47-204ENST00000587339 PLXNA1Q9UIW2 1896 aa21.78■■□□□ 1.08
TRIM47-204ENST00000587339 XRCC5P13010 732 aaKnown RBP21.78■■□□□ 1.08
TRIM47-204ENST00000587339 PSMC2P35998 433 aaKnown RBP21.78■■□□□ 1.08
TRIM47-204ENST00000587339 PPP2R3AQ06190 1150 aa21.78■■□□□ 1.08
TRIM47-204ENST00000587339 EMC2Q15006 297 aa21.78■■□□□ 1.08
TRIM47-204ENST00000587339 FIGNQ5HY92 759 aa21.78■■□□□ 1.08
TRIM47-204ENST00000587339 TAPT1Q6NXT6 567 aa21.78■■□□□ 1.08
TRIM47-204ENST00000587339 SPIRE2Q8WWL2 714 aa21.78■■□□□ 1.08
TRIM47-204ENST00000587339 IQCDQ96DY2 449 aa21.78■■□□□ 1.08
TRIM47-204ENST00000587339 MAML3Q96JK9 1138 aa21.78■■□□□ 1.08
TRIM47-204ENST00000587339 TTYH3Q9C0H2 523 aa21.78■■□□□ 1.08
TRIM47-204ENST00000587339 TRMT1Q9NXH9 659 aaKnown RBP21.78■■□□□ 1.08
TRIM47-204ENST00000587339 SIK3Q9Y2K2 1263 aa21.78■■□□□ 1.08
TRIM47-204ENST00000587339 TLL2Q9Y6L7 1015 aa21.78■■□□□ 1.08
TRIM47-204ENST00000587339 ADGRA2Q96PE1 1338 aa21.77■■□□□ 1.08
TRIM47-204ENST00000587339 RASSF10A6NK89 507 aa21.77■■□□□ 1.08
TRIM47-204ENST00000587339 USP27XA6NNY8 438 aa21.77■■□□□ 1.08
TRIM47-204ENST00000587339 OFD1O75665 1012 aa21.77■■□□□ 1.08
TRIM47-204ENST00000587339 TMEM63BQ5T3F8 832 aa21.77■■□□□ 1.08
TRIM47-204ENST00000587339 IFNL1Q8IU54 200 aa21.77■■□□□ 1.08
TRIM47-204ENST00000587339 TMEM161BQ8NDZ6 487 aa21.77■■□□□ 1.08
TRIM47-204ENST00000587339 BSNDQ8WZ55 320 aa21.77■■□□□ 1.08
TRIM47-204ENST00000587339 FAM167AQ96KS9 214 aa21.77■■□□□ 1.08
TRIM47-204ENST00000587339 IFT74Q96LB3 600 aa21.77■■□□□ 1.08
TRIM47-204ENST00000587339 MKNK1Q9BUB5 465 aa21.77■■□□□ 1.08
TRIM47-204ENST00000587339 DHX33Q9H6R0 707 aaKnown RBP21.77■■□□□ 1.08
TRIM47-204ENST00000587339 MMRN2Q9H8L6 949 aa21.77■■□□□ 1.08
TRIM47-204ENST00000587339 FRMD4BQ9Y2L6 1034 aa21.77■■□□□ 1.08
TRIM47-204ENST00000587339 SLC15A5A6NIM6 579 aa21.76■■□□□ 1.07
TRIM47-204ENST00000587339 LGR5O75473 907 aa21.76■■□□□ 1.07
TRIM47-204ENST00000587339 KCNH2Q12809 1159 aa21.76■■□□□ 1.07
TRIM47-204ENST00000587339 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.76■■□□□ 1.07
TRIM47-204ENST00000587339 CCDC155Q8N6L0 562 aa21.76■■□□□ 1.07
TRIM47-204ENST00000587339 OR8K1Q8NGG5 319 aa21.76■■□□□ 1.07
TRIM47-204ENST00000587339 KIFC3Q9BVG8 833 aa21.76■■□□□ 1.07
TRIM47-204ENST00000587339 POLR3FQ9H1D9 316 aaPredicted RBP21.76■■□□□ 1.07
TRIM47-204ENST00000587339 DMAC2Q9NW81 257 aa21.76■■□□□ 1.07
TRIM47-204ENST00000587339 SLC5A4Q9NY91 659 aa21.76■■□□□ 1.07
TRIM47-204ENST00000587339 CGNQ9P2M7 1197 aaKnown RBP21.76■■□□□ 1.07
TRIM47-204ENST00000587339 RFC5P40937 340 aa21.76■■□□□ 1.07
TRIM47-204ENST00000587339 CYP2J2P51589 502 aa21.76■■□□□ 1.07
TRIM47-204ENST00000587339 MYBPC2Q14324 1141 aa21.76■■□□□ 1.07
TRIM47-204ENST00000587339 TSR1Q2NL82 804 aaKnown RBP21.76■■□□□ 1.07
TRIM47-204ENST00000587339 PLPPR4Q7Z2D5 763 aa21.76■■□□□ 1.07
TRIM47-204ENST00000587339 TRIM50Q86XT4 487 aa21.76■■□□□ 1.07
TRIM47-204ENST00000587339 SLC9A9Q8IVB4 645 aa21.76■■□□□ 1.07
TRIM47-204ENST00000587339 FAM186BQ8IYM0 893 aa21.76■■□□□ 1.07
TRIM47-204ENST00000587339 HVCN1Q96D96 273 aa21.76■■□□□ 1.07
TRIM47-204ENST00000587339 FAM207AQ9NSI2 230 aaPredicted RBP21.76■■□□□ 1.07
TRIM47-204ENST00000587339 EMSYQ7Z589 1322 aa21.75■■□□□ 1.07
TRIM47-204ENST00000587339 A0A1W2PQJ5 194 aa21.75■■□□□ 1.07
TRIM47-204ENST00000587339 DENND3A2RUS2 1198 aa21.75■■□□□ 1.07
TRIM47-204ENST00000587339 SNAI1O95863 264 aaPredicted RBP21.75■■□□□ 1.07
TRIM47-204ENST00000587339 FECHP22830 423 aa21.75■■□□□ 1.07
TRIM47-204ENST00000587339 TARBP2Q15633 366 aaKnown RBP21.75■■□□□ 1.07
TRIM47-204ENST00000587339 DCAF17Q5H9S7 520 aaPredicted RBP21.75■■□□□ 1.07
TRIM47-204ENST00000587339 ZNF397Q8NF99 534 aaPredicted RBP21.75■■□□□ 1.07
TRIM47-204ENST00000587339 BBXQ8WY36 941 aaPredicted RBP21.75■■□□□ 1.07
TRIM47-204ENST00000587339 CCDC102AQ96A19 550 aa21.75■■□□□ 1.07
TRIM47-204ENST00000587339 C16orf45Q96MC5 204 aaPredicted RBP21.75■■□□□ 1.07
TRIM47-204ENST00000587339 CEP89Q96ST8 783 aa21.75■■□□□ 1.07
TRIM47-204ENST00000587339 DNAJC7Q99615 494 aa21.75■■□□□ 1.07
TRIM47-204ENST00000587339 TINF2Q9BSI4 451 aa21.75■■□□□ 1.07
TRIM47-204ENST00000587339 AGPAT5Q9NUQ2 364 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms