RNA–Protein interactions for RNA: ENST00000586718.1

NPC1-204, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 3

Gene NPC1, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-204ENST00000586718 MYBP10242 640 aa9.4□□□□□ -0.9
NPC1-204ENST00000586718 ATP4AP20648 1035 aa9.4□□□□□ -0.9
NPC1-204ENST00000586718 EEF1GP26641 437 aaKnown RBP9.4□□□□□ -0.9
NPC1-204ENST00000586718 DNM2P50570 870 aa9.4□□□□□ -0.9
NPC1-204ENST00000586718 NCKAP1LP55160 1127 aa9.4□□□□□ -0.9
NPC1-204ENST00000586718 PEX3P56589 373 aa9.4□□□□□ -0.9
NPC1-204ENST00000586718 PPFIA1Q13136 1202 aa9.4□□□□□ -0.9
NPC1-204ENST00000586718 FSCN1Q16658 493 aaKnown RBP9.4□□□□□ -0.9
NPC1-204ENST00000586718 FILIP1LQ4L180 1135 aa9.4□□□□□ -0.9
NPC1-204ENST00000586718 TMEM63BQ5T3F8 832 aa9.4□□□□□ -0.9
NPC1-204ENST00000586718 ZBTB8OSQ8IWT0 167 aa9.4□□□□□ -0.9
NPC1-204ENST00000586718 NELFCDQ8IXH7 590 aa9.4□□□□□ -0.9
NPC1-204ENST00000586718 SYCP3Q8IZU3 236 aa9.4□□□□□ -0.9
NPC1-204ENST00000586718 DAW1Q8N136 415 aa9.4□□□□□ -0.9
NPC1-204ENST00000586718 DEPTORQ8TB45 409 aa9.4□□□□□ -0.9
NPC1-204ENST00000586718 PXYLP1Q8TE99 480 aa9.4□□□□□ -0.9
NPC1-204ENST00000586718 SCFD1Q8WVM8 642 aa9.4□□□□□ -0.9
NPC1-204ENST00000586718 SPIRE2Q8WWL2 714 aa9.4□□□□□ -0.9
NPC1-204ENST00000586718 PSPC1Q8WXF1 523 aaKnown RBP9.4□□□□□ -0.9
NPC1-204ENST00000586718 ACCSQ96QU6 501 aa9.4□□□□□ -0.9
NPC1-204ENST00000586718 ST6GALNAC4Q9H4F1 302 aa9.4□□□□□ -0.9
NPC1-204ENST00000586718 TUT1Q9H6E5 874 aaKnown RBP9.4□□□□□ -0.9
NPC1-204ENST00000586718 DHX33Q9H6R0 707 aaKnown RBP9.4□□□□□ -0.9
NPC1-204ENST00000586718 TMEM206Q9H813 350 aa9.4□□□□□ -0.9
NPC1-204ENST00000586718 KMT5AQ9NQR1 393 aa9.4□□□□□ -0.9
NPC1-204ENST00000586718 TYW1Q9NV66 732 aaKnown RBP9.4□□□□□ -0.9
NPC1-204ENST00000586718 FANCLQ9NW38 375 aa9.4□□□□□ -0.9
NPC1-204ENST00000586718 PCDHA2Q9Y5H9 948 aa9.4□□□□□ -0.9
NPC1-204ENST00000586718 TRIM49BA6NDI0 452 aa9.39□□□□□ -0.91
NPC1-204ENST00000586718 RRN3P2A6NIE6 340 aa9.39□□□□□ -0.91
NPC1-204ENST00000586718 SFI1A8K8P3 1242 aa9.39□□□□□ -0.91
NPC1-204ENST00000586718 PDXKO00764 312 aa9.39□□□□□ -0.91
NPC1-204ENST00000586718 CETN3O15182 167 aa9.39□□□□□ -0.91
NPC1-204ENST00000586718 MAGEB2O15479 319 aa9.39□□□□□ -0.91
NPC1-204ENST00000586718 ADCY6O43306 1168 aa9.39□□□□□ -0.91
NPC1-204ENST00000586718 MSCO60682 206 aa9.39□□□□□ -0.91
NPC1-204ENST00000586718 PRPF6O94906 941 aaKnown RBP9.39□□□□□ -0.91
NPC1-204ENST00000586718 ADCY5O95622 1261 aa9.39□□□□□ -0.91
NPC1-204ENST00000586718 GNA14O95837 355 aa9.39□□□□□ -0.91
NPC1-204ENST00000586718 PTMAP06454 111 aaKnown RBP9.39□□□□□ -0.91
NPC1-204ENST00000586718 C6orf222P0C671 652 aaPredicted RBP9.39□□□□□ -0.91
NPC1-204ENST00000586718 ELNP15502 786 aa9.39□□□□□ -0.91
NPC1-204ENST00000586718 RPL13P26373 211 aaKnown RBP9.39□□□□□ -0.91
NPC1-204ENST00000586718 TMOD1P28289 359 aa9.39□□□□□ -0.91
NPC1-204ENST00000586718 NMT1P30419 496 aaKnown RBP9.39□□□□□ -0.91
NPC1-204ENST00000586718 NAMPTP43490 491 aa9.39□□□□□ -0.91
NPC1-204ENST00000586718 ZNF75DP51815 510 aa9.39□□□□□ -0.91
NPC1-204ENST00000586718 GJA9P57773 515 aa9.39□□□□□ -0.91
NPC1-204ENST00000586718 C1QTNF8P60827 252 aa9.39□□□□□ -0.91
NPC1-204ENST00000586718 IGBP1P78318 339 aa9.39□□□□□ -0.91
NPC1-204ENST00000586718 TFDP1Q14186 410 aa9.39□□□□□ -0.91
NPC1-204ENST00000586718 HSP90AA2PQ14568 343 aaPredicted RBP9.39□□□□□ -0.91
NPC1-204ENST00000586718 MXD4Q14582 209 aaPredicted RBP9.39□□□□□ -0.91
NPC1-204ENST00000586718 TARBP2Q15633 366 aaKnown RBP9.39□□□□□ -0.91
NPC1-204ENST00000586718 KNOP1Q1ED39 458 aaKnown RBP9.39□□□□□ -0.91
NPC1-204ENST00000586718 EDRF1Q3B7T1 1238 aa9.39□□□□□ -0.91
NPC1-204ENST00000586718 CDKAL1Q5VV42 579 aa9.39□□□□□ -0.91
NPC1-204ENST00000586718 IER5Q5VY09 327 aa9.39□□□□□ -0.91
NPC1-204ENST00000586718 CENPPQ6IPU0 288 aa9.39□□□□□ -0.91
NPC1-204ENST00000586718 TTI2Q6NXR4 508 aa9.39□□□□□ -0.91
NPC1-204ENST00000586718 EPM2AIP1Q7L775 607 aaPredicted RBP9.39□□□□□ -0.91
NPC1-204ENST00000586718 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.39□□□□□ -0.91
NPC1-204ENST00000586718 DRC7Q8IY82 874 aa9.39□□□□□ -0.91
NPC1-204ENST00000586718 LENG1Q96BZ8 264 aaPredicted RBP9.39□□□□□ -0.91
NPC1-204ENST00000586718 CNOT6LQ96LI5 555 aaKnown RBP9.39□□□□□ -0.91
NPC1-204ENST00000586718 CEP63Q96MT8 703 aa9.39□□□□□ -0.91
NPC1-204ENST00000586718 MAP7D2Q96T17 732 aa9.39□□□□□ -0.91
NPC1-204ENST00000586718 C2orf40Q9H1Z8 148 aa9.39□□□□□ -0.91
NPC1-204ENST00000586718 GPRC5CQ9NQ84 441 aa9.39□□□□□ -0.91
NPC1-204ENST00000586718 XPNPEP3Q9NQH7 507 aa9.39□□□□□ -0.91
NPC1-204ENST00000586718 XPNPEP1Q9NQW7 623 aa9.39□□□□□ -0.91
NPC1-204ENST00000586718 CGNQ9P2M7 1197 aaKnown RBP9.39□□□□□ -0.91
NPC1-204ENST00000586718 TRIM17Q9Y577 477 aa9.39□□□□□ -0.91
NPC1-204ENST00000586718 LRRIQ4A6NIV6 560 aa9.38□□□□□ -0.91
NPC1-204ENST00000586718 KCNJ18B7U540 433 aa9.38□□□□□ -0.91
NPC1-204ENST00000586718 SLC16A4O15374 487 aa9.38□□□□□ -0.91
NPC1-204ENST00000586718 SLC16A3O15427 465 aaKnown RBP9.38□□□□□ -0.91
NPC1-204ENST00000586718 INHAP05111 366 aa9.38□□□□□ -0.91
NPC1-204ENST00000586718 ZNF18P17022 549 aa9.38□□□□□ -0.91
NPC1-204ENST00000586718 PTGS1P23219 599 aa9.38□□□□□ -0.91
NPC1-204ENST00000586718 CDC25BP30305 580 aa9.38□□□□□ -0.91
NPC1-204ENST00000586718 MTIF2P46199 727 aaKnown RBP9.38□□□□□ -0.91
NPC1-204ENST00000586718 NPTX2P47972 431 aa9.38□□□□□ -0.91
NPC1-204ENST00000586718 PSEN2P49810 448 aa9.38□□□□□ -0.91
NPC1-204ENST00000586718 CASP5P51878 434 aa9.38□□□□□ -0.91
NPC1-204ENST00000586718 SNRPFP62306 86 aaKnown RBP9.38□□□□□ -0.91
NPC1-204ENST00000586718 FANCCQ00597 558 aa9.38□□□□□ -0.91
NPC1-204ENST00000586718 FKBP3Q00688 224 aaKnown RBP9.38□□□□□ -0.91
NPC1-204ENST00000586718 CACNB2Q08289 660 aaPredicted RBP9.38□□□□□ -0.91
NPC1-204ENST00000586718 STRN3Q13033 797 aa9.38□□□□□ -0.91
NPC1-204ENST00000586718 KCNJ12Q14500 433 aa9.38□□□□□ -0.91
NPC1-204ENST00000586718 MFSD10Q14728 455 aa9.38□□□□□ -0.91
NPC1-204ENST00000586718 GRIK4Q16099 956 aa9.38□□□□□ -0.91
NPC1-204ENST00000586718 CCDC40Q4G0X9 1142 aa9.38□□□□□ -0.91
NPC1-204ENST00000586718 HSP90AA4PQ58FG1 418 aa9.38□□□□□ -0.91
NPC1-204ENST00000586718 ANKRD40Q6AI12 368 aa9.38□□□□□ -0.91
NPC1-204ENST00000586718 ZNF720Q7Z2F6 126 aa9.38□□□□□ -0.91
NPC1-204ENST00000586718 HAUS6Q7Z4H7 955 aa9.38□□□□□ -0.91
NPC1-204ENST00000586718 MAP4K3Q8IVH8 894 aa9.38□□□□□ -0.91
NPC1-204ENST00000586718 GLIS3Q8NEA6 775 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms