RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 ANO5Q75V66 913 aa11.23□□□□□ -0.61
APOC1-201ENST00000586638 EPM2AIP1Q7L775 607 aaPredicted RBP11.23□□□□□ -0.61
APOC1-201ENST00000586638 ZSCAN30Q86W11 494 aa11.23□□□□□ -0.61
APOC1-201ENST00000586638 ABRAQ8N0Z2 381 aa11.23□□□□□ -0.61
APOC1-201ENST00000586638 ANKRD20A12PQ8NF67 263 aa11.23□□□□□ -0.61
APOC1-201ENST00000586638 FIZ1Q96SL8 496 aa11.23□□□□□ -0.61
APOC1-201ENST00000586638 PCYT2Q99447 389 aa11.23□□□□□ -0.61
APOC1-201ENST00000586638 SENP6Q9GZR1 1112 aaPredicted RBP11.23□□□□□ -0.61
APOC1-201ENST00000586638 VPS16Q9H269 839 aa11.23□□□□□ -0.61
APOC1-201ENST00000586638 PARVGQ9HBI0 331 aa11.23□□□□□ -0.61
APOC1-201ENST00000586638 GPRC5CQ9NQ84 441 aa11.23□□□□□ -0.61
APOC1-201ENST00000586638 ZNF302Q9NR11 478 aa11.23□□□□□ -0.61
APOC1-201ENST00000586638 PDGFCQ9NRA1 345 aa11.23□□□□□ -0.61
APOC1-201ENST00000586638 ANKEF1Q9NU02 776 aa11.23□□□□□ -0.61
APOC1-201ENST00000586638 KCND2Q9NZV8 630 aa11.23□□□□□ -0.61
APOC1-201ENST00000586638 MAGEC2Q9UBF1 373 aaPredicted RBP11.23□□□□□ -0.61
APOC1-201ENST00000586638 ZKSCAN5Q9Y2L8 839 aa11.23□□□□□ -0.61
APOC1-201ENST00000586638 LOC102724159A0A0B4J2E5 919 aa11.22□□□□□ -0.61
APOC1-201ENST00000586638 GSTTP1A0A1W2PQM5 241 aa11.22□□□□□ -0.61
APOC1-201ENST00000586638 DKC1O60832 514 aaKnown RBP eCLIP11.22□□□□□ -0.61
APOC1-201ENST00000586638 UBE4BO95155 1302 aa11.22□□□□□ -0.61
APOC1-201ENST00000586638 KIF20AO95235 890 aa11.22□□□□□ -0.61
APOC1-201ENST00000586638 ATG7O95352 703 aa11.22□□□□□ -0.61
APOC1-201ENST00000586638 EEF1GP26641 437 aaKnown RBP11.22□□□□□ -0.61
APOC1-201ENST00000586638 CNGA1P29973 690 aa11.22□□□□□ -0.61
APOC1-201ENST00000586638 HOXD13P35453 343 aa11.22□□□□□ -0.61
APOC1-201ENST00000586638 GOLGA8FQ08AF8 430 aa11.22□□□□□ -0.61
APOC1-201ENST00000586638 GOLGA8DPQ0D2H9 430 aa11.22□□□□□ -0.61
APOC1-201ENST00000586638 LRMPQ12912 555 aa11.22□□□□□ -0.61
APOC1-201ENST00000586638 PWP2Q15269 919 aaKnown RBP11.22□□□□□ -0.61
APOC1-201ENST00000586638 MTERF2Q49AM1 385 aa11.22□□□□□ -0.61
APOC1-201ENST00000586638 ODR4Q5SWX8 454 aa11.22□□□□□ -0.61
APOC1-201ENST00000586638 TMEM63BQ5T3F8 832 aa11.22□□□□□ -0.61
APOC1-201ENST00000586638 GJC2Q5T442 439 aaPredicted RBP11.22□□□□□ -0.61
APOC1-201ENST00000586638 FAM109BQ6ICB4 259 aaPredicted RBP11.22□□□□□ -0.61
APOC1-201ENST00000586638 KSR1Q8IVT5 923 aa11.22□□□□□ -0.61
APOC1-201ENST00000586638 FAM114A1Q8IWE2 563 aa11.22□□□□□ -0.61
APOC1-201ENST00000586638 NPLOC4Q8TAT6 608 aa11.22□□□□□ -0.61
APOC1-201ENST00000586638 CTAGE1Q96RT6 745 aa11.22□□□□□ -0.61
APOC1-201ENST00000586638 APBA2Q99767 749 aa11.22□□□□□ -0.61
APOC1-201ENST00000586638 KCTD10Q9H3F6 313 aa11.22□□□□□ -0.61
APOC1-201ENST00000586638 RTN4Q9NQC3 1192 aaKnown RBP11.22□□□□□ -0.61
APOC1-201ENST00000586638 RRAGDQ9NQL2 400 aaPredicted RBP11.22□□□□□ -0.61
APOC1-201ENST00000586638 OLFML3Q9NRN5 406 aa11.22□□□□□ -0.61
APOC1-201ENST00000586638 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.22□□□□□ -0.61
APOC1-201ENST00000586638 SEL1LQ9UBV2 794 aa11.22□□□□□ -0.61
APOC1-201ENST00000586638 DDX41Q9UJV9 622 aaKnown RBP11.22□□□□□ -0.61
APOC1-201ENST00000586638 SLC15A5A6NIM6 579 aa11.21□□□□□ -0.61
APOC1-201ENST00000586638 LGALS16A8MUM7 142 aa11.21□□□□□ -0.61
APOC1-201ENST00000586638 N4BP3O15049 544 aa11.21□□□□□ -0.61
APOC1-201ENST00000586638 NKRFO15226 690 aaKnown RBP eCLIP11.21□□□□□ -0.61
APOC1-201ENST00000586638 EIF3DO15371 548 aaKnown RBP eCLIP11.21□□□□□ -0.618e-8■□□□□ 9.1
APOC1-201ENST00000586638 OATP04181 439 aa11.21□□□□□ -0.61
APOC1-201ENST00000586638 PRKCSHP14314 528 aaPredicted RBP11.21□□□□□ -0.61
APOC1-201ENST00000586638 ATP4AP20648 1035 aa11.21□□□□□ -0.61
APOC1-201ENST00000586638 MSNP26038 577 aaKnown RBP11.21□□□□□ -0.61
APOC1-201ENST00000586638 PBX1P40424 430 aa11.21□□□□□ -0.61
APOC1-201ENST00000586638 MTIF2P46199 727 aaKnown RBP11.21□□□□□ -0.61
APOC1-201ENST00000586638 KCNA1Q09470 495 aa11.21□□□□□ -0.61
APOC1-201ENST00000586638 BMT2Q1RMZ1 405 aa11.21□□□□□ -0.61
APOC1-201ENST00000586638 FILIP1LQ4L180 1135 aa11.21□□□□□ -0.61
APOC1-201ENST00000586638 ZC2HC1CQ53FD0 456 aaPredicted RBP11.21□□□□□ -0.61
APOC1-201ENST00000586638 CELF3Q5SZQ8 465 aaKnown RBP11.21□□□□□ -0.61
APOC1-201ENST00000586638 FAM102BQ5T8I3 360 aa11.21□□□□□ -0.61
APOC1-201ENST00000586638 METTL7BQ6UX53 244 aa11.21□□□□□ -0.61
APOC1-201ENST00000586638 DPP9Q86TI2 863 aa11.21□□□□□ -0.61
APOC1-201ENST00000586638 FAM178BQ8IXR5 827 aa11.21□□□□□ -0.61
APOC1-201ENST00000586638 CACTINQ8WUQ7 758 aaKnown RBP11.21□□□□□ -0.61
APOC1-201ENST00000586638 MAML3Q96JK9 1138 aa11.21□□□□□ -0.61
APOC1-201ENST00000586638 CEP170P1Q96L14 293 aa11.21□□□□□ -0.61
APOC1-201ENST00000586638 IKZF4Q9H2S9 585 aa11.21□□□□□ -0.61
APOC1-201ENST00000586638 MLXIPQ9HAP2 919 aa11.21□□□□□ -0.61
APOC1-201ENST00000586638 VTA1Q9NP79 307 aa11.21□□□□□ -0.61
APOC1-201ENST00000586638 IMPACTQ9P2X3 320 aa11.21□□□□□ -0.61
APOC1-201ENST00000586638 PRKAG2Q9UGJ0 569 aa11.21□□□□□ -0.61
APOC1-201ENST00000586638 PYCARDQ9ULZ3 195 aa11.21□□□□□ -0.61
APOC1-201ENST00000586638 SPTBN5Q9NRC6 3674 aaKnown RBP11.2□□□□□ -0.62
APOC1-201ENST00000586638 IGKV6D-21A0A0A0MT36 114 aa11.2□□□□□ -0.62
APOC1-201ENST00000586638 PES1O00541 588 aaKnown RBP11.2□□□□□ -0.62
APOC1-201ENST00000586638 STRNO43815 780 aa11.2□□□□□ -0.62
APOC1-201ENST00000586638 MSCO60682 206 aa11.2□□□□□ -0.62
APOC1-201ENST00000586638 SNAI1O95863 264 aaPredicted RBP11.2□□□□□ -0.62
APOC1-201ENST00000586638 TXNP10599 105 aaKnown RBP11.2□□□□□ -0.62
APOC1-201ENST00000586638 TGFB3P10600 412 aa11.2□□□□□ -0.62
APOC1-201ENST00000586638 PLS3P13797 630 aa11.2□□□□□ -0.62
APOC1-201ENST00000586638 MARK3P27448 753 aa11.2□□□□□ -0.62
APOC1-201ENST00000586638 TCF7P36402 384 aaPredicted RBP11.2□□□□□ -0.62
APOC1-201ENST00000586638 ATN1P54259 1190 aaPredicted RBP11.2□□□□□ -0.62
APOC1-201ENST00000586638 GSDMDP57764 484 aa11.2□□□□□ -0.62
APOC1-201ENST00000586638 TTLL4Q14679 1199 aa11.2□□□□□ -0.62
APOC1-201ENST00000586638 NR1I3Q14994 352 aa11.2□□□□□ -0.62
APOC1-201ENST00000586638 KNOP1Q1ED39 458 aaKnown RBP11.2□□□□□ -0.62
APOC1-201ENST00000586638 CCDC40Q4G0X9 1142 aa11.2□□□□□ -0.62
APOC1-201ENST00000586638 XKR3Q5GH77 459 aa11.2□□□□□ -0.62
APOC1-201ENST00000586638 FAM160B1Q5W0V3 765 aa11.2□□□□□ -0.62
APOC1-201ENST00000586638 TAPT1Q6NXT6 567 aa11.2□□□□□ -0.62
APOC1-201ENST00000586638 ARMCX5Q6P1M9 558 aa11.2□□□□□ -0.62
APOC1-201ENST00000586638 CCDC62Q6P9F0 684 aa11.2□□□□□ -0.62
APOC1-201ENST00000586638 KCNV1Q6PIU1 500 aa11.2□□□□□ -0.62
APOC1-201ENST00000586638 FOXR2Q6PJQ5 311 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms