RNA–Protein interactions for RNA: ENST00000584966.1

CDH8-213, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-213ENST00000584966 ADCY3O60266 1144 aa6.47□□□□□ -1.37
CDH8-213ENST00000584966 SNAI1O95863 264 aaPredicted RBP6.47□□□□□ -1.37
CDH8-213ENST00000584966 SCG2P13521 617 aa6.47□□□□□ -1.37
CDH8-213ENST00000584966 NFKB1P19838 968 aa6.47□□□□□ -1.37
CDH8-213ENST00000584966 HOXD10P28358 340 aa6.47□□□□□ -1.37
CDH8-213ENST00000584966 RGS2P41220 211 aa6.47□□□□□ -1.37
CDH8-213ENST00000584966 MCM2P49736 904 aa6.47□□□□□ -1.37
CDH8-213ENST00000584966 SSRP1Q08945 709 aaKnown RBP6.47□□□□□ -1.37
CDH8-213ENST00000584966 KCTD2Q14681 263 aa6.47□□□□□ -1.37
CDH8-213ENST00000584966 ARHGEF6Q15052 776 aa6.47□□□□□ -1.37
CDH8-213ENST00000584966 PKN2Q16513 984 aaKnown RBP6.47□□□□□ -1.37
CDH8-213ENST00000584966 MAP3K21Q5TCX8 1036 aa6.47□□□□□ -1.37
CDH8-213ENST00000584966 WDR78Q5VTH9 848 aa6.47□□□□□ -1.37
CDH8-213ENST00000584966 C1orf53Q5VUE5 145 aa6.47□□□□□ -1.37
CDH8-213ENST00000584966 OLFML2BQ68BL8 750 aa6.47□□□□□ -1.37
CDH8-213ENST00000584966 FBXO46Q6PJ61 603 aaPredicted RBP6.47□□□□□ -1.37
CDH8-213ENST00000584966 SLC30A10Q6XR72 485 aa6.47□□□□□ -1.37
CDH8-213ENST00000584966 RNF207Q6ZRF8 634 aa6.47□□□□□ -1.37
CDH8-213ENST00000584966 CCDC83Q8IWF9 413 aa6.47□□□□□ -1.37
CDH8-213ENST00000584966 ETFBKMTQ8IXQ9 262 aa6.47□□□□□ -1.37
CDH8-213ENST00000584966 ALDH16A1Q8IZ83 802 aa6.47□□□□□ -1.37
CDH8-213ENST00000584966 ANKRD35Q8N283 1001 aa6.47□□□□□ -1.37
CDH8-213ENST00000584966 TRPV1Q8NER1 839 aa6.47□□□□□ -1.37
CDH8-213ENST00000584966 MORC4Q8TE76 937 aa6.47□□□□□ -1.37
CDH8-213ENST00000584966 SOCS4Q8WXH5 440 aa6.47□□□□□ -1.37
CDH8-213ENST00000584966 TAAR1Q96RJ0 339 aa6.47□□□□□ -1.37
CDH8-213ENST00000584966 LPIN3Q9BQK8 851 aa6.47□□□□□ -1.37
CDH8-213ENST00000584966 LLPHQ9BRT6 129 aaKnown RBP6.47□□□□□ -1.37
CDH8-213ENST00000584966 MCOLN1Q9GZU1 580 aa6.47□□□□□ -1.37
CDH8-213ENST00000584966 ZMYND12Q9H0C1 365 aa6.47□□□□□ -1.37
CDH8-213ENST00000584966 SH2B1Q9NRF2 756 aaPredicted RBP6.47□□□□□ -1.37
CDH8-213ENST00000584966 GJB4Q9NTQ9 266 aa6.47□□□□□ -1.37
CDH8-213ENST00000584966 MAP3K20Q9NYL2 800 aaKnown RBP6.47□□□□□ -1.37
CDH8-213ENST00000584966 RAXQ9Y2V3 346 aa6.47□□□□□ -1.37
CDH8-213ENST00000584966 CTDP1Q9Y5B0 961 aaPredicted RBP6.47□□□□□ -1.37
CDH8-213ENST00000584966 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.47□□□□□ -1.37
CDH8-213ENST00000584966 TRIP12Q14669 1992 aaPredicted RBP6.47□□□□□ -1.37
CDH8-213ENST00000584966 PFASO15067 1338 aa6.47□□□□□ -1.37
CDH8-213ENST00000584966 FRMPD4Q14CM0 1322 aa6.47□□□□□ -1.37
CDH8-213ENST00000584966 ESYT2A0FGR8 921 aa6.46□□□□□ -1.38
CDH8-213ENST00000584966 PTPDC1A2A3K4 754 aa6.46□□□□□ -1.38
CDH8-213ENST00000584966 SMCO2A6NFE2 343 aa6.46□□□□□ -1.38
CDH8-213ENST00000584966 hCG_1984214I3L0E3 225 aa6.46□□□□□ -1.38
CDH8-213ENST00000584966 DLL1O00548 723 aa6.46□□□□□ -1.38
CDH8-213ENST00000584966 GSC2O15499 205 aa6.46□□□□□ -1.38
CDH8-213ENST00000584966 DEXIO95424 95 aa6.46□□□□□ -1.38
CDH8-213ENST00000584966 SPINK2P20155 84 aa6.46□□□□□ -1.38
CDH8-213ENST00000584966 EDNRBP24530 442 aa6.46□□□□□ -1.38
CDH8-213ENST00000584966 HOXA13P31271 388 aaPredicted RBP6.46□□□□□ -1.38
CDH8-213ENST00000584966 GRK4P32298 578 aa6.46□□□□□ -1.38
CDH8-213ENST00000584966 PLCB3Q01970 1234 aa6.46□□□□□ -1.38
CDH8-213ENST00000584966 EHHADHQ08426 723 aa6.46□□□□□ -1.38
CDH8-213ENST00000584966 C11orf91Q3C1V1 193 aa6.46□□□□□ -1.38
CDH8-213ENST00000584966 USP17L6PQ6QN14 398 aa6.46□□□□□ -1.38
CDH8-213ENST00000584966 NSMFQ6X4W1 530 aa6.46□□□□□ -1.38
CDH8-213ENST00000584966 HEATR3Q7Z4Q2 680 aa6.46□□□□□ -1.38
CDH8-213ENST00000584966 DPP9Q86TI2 863 aa6.46□□□□□ -1.38
CDH8-213ENST00000584966 ATCAYQ86WG3 371 aa6.46□□□□□ -1.38
CDH8-213ENST00000584966 MCF2L2Q86YR7 1114 aa6.46□□□□□ -1.38
CDH8-213ENST00000584966 GJD3Q8N144 294 aa6.46□□□□□ -1.38
CDH8-213ENST00000584966 SAMD3Q8N6K7 520 aa6.46□□□□□ -1.38
CDH8-213ENST00000584966 ZNF713Q8N859 430 aaPredicted RBP6.46□□□□□ -1.38
CDH8-213ENST00000584966 SH3TC2Q8TF17 1288 aa6.46□□□□□ -1.38
CDH8-213ENST00000584966 KAT6AQ92794 2004 aa6.46□□□□□ -1.38
CDH8-213ENST00000584966 ARMC5Q96C12 935 aa6.46□□□□□ -1.38
CDH8-213ENST00000584966 DDX11Q96FC9 970 aa6.46□□□□□ -1.38
CDH8-213ENST00000584966 APBA2Q99767 749 aa6.46□□□□□ -1.38
CDH8-213ENST00000584966 TINF2Q9BSI4 451 aa6.46□□□□□ -1.38
CDH8-213ENST00000584966 GSX2Q9BZM3 304 aa6.46□□□□□ -1.38
CDH8-213ENST00000584966 RIC8AQ9NPQ8 531 aa6.46□□□□□ -1.38
CDH8-213ENST00000584966 VPS54Q9P1Q0 977 aa6.46□□□□□ -1.38
CDH8-213ENST00000584966 SEC63Q9UGP8 760 aaKnown RBP6.46□□□□□ -1.38
CDH8-213ENST00000584966 RPTORQ8N122 1335 aa6.46□□□□□ -1.38
CDH8-213ENST00000584966 LOC102724159A0A0B4J2E5 919 aa6.45□□□□□ -1.38
CDH8-213ENST00000584966 GCOM1H8Y6P7 765 aaPredicted RBP6.45□□□□□ -1.38
CDH8-213ENST00000584966 CPLX1O14810 134 aa6.45□□□□□ -1.38
CDH8-213ENST00000584966 PRPF40AO75400 957 aaKnown RBP6.45□□□□□ -1.38
CDH8-213ENST00000584966 CDKL5O76039 1030 aa6.45□□□□□ -1.38
CDH8-213ENST00000584966 CFBP00751 764 aa6.45□□□□□ -1.38
CDH8-213ENST00000584966 POLR2MP0CAP2 368 aa6.45□□□□□ -1.38
CDH8-213ENST00000584966 ZNF865P0CJ78 1059 aaPredicted RBP6.45□□□□□ -1.38
CDH8-213ENST00000584966 CALML3P27482 149 aa6.45□□□□□ -1.38
CDH8-213ENST00000584966 MZF1P28698 734 aaPredicted RBP6.45□□□□□ -1.38
CDH8-213ENST00000584966 CYP2C19P33261 490 aa6.45□□□□□ -1.38
CDH8-213ENST00000584966 ALDH5A1P51649 535 aaPredicted RBP6.45□□□□□ -1.38
CDH8-213ENST00000584966 NAPAP54920 295 aa6.45□□□□□ -1.38
CDH8-213ENST00000584966 CACNB2Q08289 660 aaPredicted RBP6.45□□□□□ -1.38
CDH8-213ENST00000584966 TRAF1Q13077 416 aa6.45□□□□□ -1.38
CDH8-213ENST00000584966 PWP2Q15269 919 aaKnown RBP6.45□□□□□ -1.38
CDH8-213ENST00000584966 UBE2SQ16763 222 aa6.45□□□□□ -1.38
CDH8-213ENST00000584966 PERM1Q5SV97 790 aa6.45□□□□□ -1.38
CDH8-213ENST00000584966 PRAMEF19Q5SWL8 479 aa6.45□□□□□ -1.38
CDH8-213ENST00000584966 TMEM63BQ5T3F8 832 aa6.45□□□□□ -1.38
CDH8-213ENST00000584966 TAPT1Q6NXT6 567 aa6.45□□□□□ -1.38
CDH8-213ENST00000584966 ELMSAN1Q6PJG2 1045 aa6.45□□□□□ -1.38
CDH8-213ENST00000584966 BTLAQ7Z6A9 289 aa6.45□□□□□ -1.38
CDH8-213ENST00000584966 CCAR1Q8IX12 1150 aaKnown RBP6.45□□□□□ -1.38
CDH8-213ENST00000584966 MSL3Q8N5Y2 521 aaKnown RBP6.45□□□□□ -1.38
CDH8-213ENST00000584966 DNERQ8NFT8 737 aa6.45□□□□□ -1.38
CDH8-213ENST00000584966 IL31RAQ8NI17 732 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms