RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 CLCN3P51790 818 aa16.11■□□□□ 0.17
CSNK1D-224ENST00000584672 ANTXR2P58335 489 aa16.11■□□□□ 0.17
CSNK1D-224ENST00000584672 SART3Q15020 963 aaKnown RBP16.11■□□□□ 0.17
CSNK1D-224ENST00000584672 PDXDC2PQ6P474 469 aa16.11■□□□□ 0.17
CSNK1D-224ENST00000584672 OTOP3Q7RTS5 596 aa16.11■□□□□ 0.17
CSNK1D-224ENST00000584672 RAB11FIP4Q86YS3 637 aa16.11■□□□□ 0.17
CSNK1D-224ENST00000584672 PLEKHM2Q8IWE5 1019 aa16.11■□□□□ 0.17
CSNK1D-224ENST00000584672 ZNF654Q8IZM8 581 aa16.11■□□□□ 0.17
CSNK1D-224ENST00000584672 SRBD1Q8N5C6 995 aaKnown RBP16.11■□□□□ 0.17
CSNK1D-224ENST00000584672 ZBP1Q9H171 429 aa16.11■□□□□ 0.17
CSNK1D-224ENST00000584672 HIP1O00291 1037 aa16.1■□□□□ 0.17
CSNK1D-224ENST00000584672 ZC3H11AO75152 810 aaKnown RBP eCLIP16.1■□□□□ 0.172e-12■■■■■ 27.9
CSNK1D-224ENST00000584672 C22orf31O95567 290 aa16.1■□□□□ 0.17
CSNK1D-224ENST00000584672 DCNP07585 359 aaKnown RBP16.1■□□□□ 0.17
CSNK1D-224ENST00000584672 CYP21A2P08686 494 aa16.1■□□□□ 0.17
CSNK1D-224ENST00000584672 ZSCAN20P17040 1043 aaPredicted RBP16.1■□□□□ 0.17
CSNK1D-224ENST00000584672 FGFR4P22455 802 aa16.1■□□□□ 0.17
CSNK1D-224ENST00000584672 ALDH7A1P49419 539 aaKnown RBP16.1■□□□□ 0.17
CSNK1D-224ENST00000584672 BMS1Q14692 1282 aaKnown RBP16.1■□□□□ 0.17
CSNK1D-224ENST00000584672 RSPO4Q2I0M5 234 aaPredicted RBP16.1■□□□□ 0.17
CSNK1D-224ENST00000584672 LONRF3Q496Y0 759 aa16.1■□□□□ 0.17
CSNK1D-224ENST00000584672 FAM160B1Q5W0V3 765 aa16.1■□□□□ 0.17
CSNK1D-224ENST00000584672 CKAP2LQ8IYA6 745 aa16.1■□□□□ 0.17
CSNK1D-224ENST00000584672 CCDC82Q8N4S0 544 aa16.1■□□□□ 0.17
CSNK1D-224ENST00000584672 SLC22A17Q8WUG5 538 aa16.1■□□□□ 0.17
CSNK1D-224ENST00000584672 BCL7CQ8WUZ0 217 aaPredicted RBP16.1■□□□□ 0.17
CSNK1D-224ENST00000584672 SEMA4AQ9H3S1 761 aa16.1■□□□□ 0.17
CSNK1D-224ENST00000584672 AGO4Q9HCK5 861 aaKnown RBP16.1■□□□□ 0.17
CSNK1D-224ENST00000584672 ZNF302Q9NR11 478 aa16.1■□□□□ 0.17
CSNK1D-224ENST00000584672 AKT3Q9Y243 479 aa16.1■□□□□ 0.17
CSNK1D-224ENST00000584672 NFASCO94856 1347 aa16.1■□□□□ 0.17
CSNK1D-224ENST00000584672 COL1A2P08123 1366 aa16.1■□□□□ 0.17
CSNK1D-224ENST00000584672 E7EWF7 191 aa16.09■□□□□ 0.17
CSNK1D-224ENST00000584672 ATG7O95352 703 aa16.09■□□□□ 0.17
CSNK1D-224ENST00000584672 MYBP10242 640 aa16.09■□□□□ 0.17
CSNK1D-224ENST00000584672 KIF5BP33176 963 aa16.09■□□□□ 0.17
CSNK1D-224ENST00000584672 SLC26A2P50443 739 aa16.09■□□□□ 0.17
CSNK1D-224ENST00000584672 NLRP11P59045 1033 aaKnown RBP16.09■□□□□ 0.17
CSNK1D-224ENST00000584672 ZNF484Q5JVG2 852 aa16.09■□□□□ 0.17
CSNK1D-224ENST00000584672 HEATR3Q7Z4Q2 680 aa16.09■□□□□ 0.17
CSNK1D-224ENST00000584672 GPR149Q86SP6 731 aa16.09■□□□□ 0.17
CSNK1D-224ENST00000584672 RUBCNQ92622 972 aa16.09■□□□□ 0.17
CSNK1D-224ENST00000584672 TBC1D17Q9HA65 648 aa16.09■□□□□ 0.17
CSNK1D-224ENST00000584672 DLL3Q9NYJ7 618 aa16.09■□□□□ 0.17
CSNK1D-224ENST00000584672 ACACBO00763 2458 aa16.09■□□□□ 0.17
CSNK1D-224ENST00000584672 FANCMQ8IYD8 2048 aa16.09■□□□□ 0.17
CSNK1D-224ENST00000584672 MYH9P35579 1960 aaKnown RBP16.08■□□□□ 0.16
CSNK1D-224ENST00000584672 IGKV6D-21A0A0A0MT36 114 aa16.08■□□□□ 0.16
CSNK1D-224ENST00000584672 N4BP1O75113 896 aaKnown RBP16.08■□□□□ 0.16
CSNK1D-224ENST00000584672 SSBP05455 408 aaKnown RBP eCLIP16.08■□□□□ 0.16
CSNK1D-224ENST00000584672 ATP4AP20648 1035 aa16.08■□□□□ 0.16
CSNK1D-224ENST00000584672 GBP2P32456 591 aaPredicted RBP16.08■□□□□ 0.16
CSNK1D-224ENST00000584672 HDAC1Q13547 482 aaPredicted RBP16.08■□□□□ 0.16
CSNK1D-224ENST00000584672 SWSAP1Q6NVH7 229 aa16.08■□□□□ 0.16
CSNK1D-224ENST00000584672 ABHD15Q6UXT9 468 aa16.08■□□□□ 0.16
CSNK1D-224ENST00000584672 LRRC71Q8N4P6 559 aa16.08■□□□□ 0.16
CSNK1D-224ENST00000584672 ST13P5Q8NFI4 369 aaPredicted RBP16.08■□□□□ 0.16
CSNK1D-224ENST00000584672 NCOA7Q8NI08 942 aa16.08■□□□□ 0.16
CSNK1D-224ENST00000584672 IGDCC4Q8TDY8 1250 aa16.08■□□□□ 0.16
CSNK1D-224ENST00000584672 SFXN1Q9H9B4 322 aa16.08■□□□□ 0.16
CSNK1D-224ENST00000584672 U3KPZ7 1027 aaPredicted RBP16.08■□□□□ 0.16
CSNK1D-224ENST00000584672 CSDE1O75534 798 aaKnown RBP16.07■□□□□ 0.16
CSNK1D-224ENST00000584672 DDAH1O94760 285 aa16.07■□□□□ 0.16
CSNK1D-224ENST00000584672 SP9P0CG40 484 aa16.07■□□□□ 0.16
CSNK1D-224ENST00000584672 CTSAP10619 480 aa16.07■□□□□ 0.16
CSNK1D-224ENST00000584672 PTH1RQ03431 593 aa16.07■□□□□ 0.16
CSNK1D-224ENST00000584672 CEP55Q53EZ4 464 aa16.07■□□□□ 0.16
CSNK1D-224ENST00000584672 LPPQ93052 612 aa16.07■□□□□ 0.16
CSNK1D-224ENST00000584672 SCLT1Q96NL6 688 aa16.07■□□□□ 0.16
CSNK1D-224ENST00000584672 MRPL9Q9BYD2 267 aaKnown RBP16.07■□□□□ 0.16
CSNK1D-224ENST00000584672 GBP3Q9H0R5 595 aa16.07■□□□□ 0.16
CSNK1D-224ENST00000584672 LY9Q9HBG7 655 aa16.07■□□□□ 0.16
CSNK1D-224ENST00000584672 INPP5FQ9Y2H2 1132 aa16.07■□□□□ 0.16
CSNK1D-224ENST00000584672 CACNA1GO43497 2377 aa16.06■□□□□ 0.16
CSNK1D-224ENST00000584672 GPR179Q6PRD1 2367 aa16.06■□□□□ 0.16
CSNK1D-224ENST00000584672 POTEMA6NI47 508 aa16.06■□□□□ 0.16
CSNK1D-224ENST00000584672 LETM2Q2VYF4 491 aa16.06■□□□□ 0.16
CSNK1D-224ENST00000584672 ZC3H14Q6PJT7 736 aaKnown RBP16.06■□□□□ 0.16
CSNK1D-224ENST00000584672 POTEGQ6S5H5 508 aa16.06■□□□□ 0.16
CSNK1D-224ENST00000584672 NFXL1Q6ZNB6 911 aa16.06■□□□□ 0.16
CSNK1D-224ENST00000584672 FAM43BQ6ZT52 329 aaPredicted RBP16.06■□□□□ 0.16
CSNK1D-224ENST00000584672 ZNF598Q86UK7 904 aaKnown RBP16.06■□□□□ 0.16
CSNK1D-224ENST00000584672 VN1R3Q9BXE9 311 aa16.06■□□□□ 0.16
CSNK1D-224ENST00000584672 ANO3Q9BYT9 981 aa16.06■□□□□ 0.16
CSNK1D-224ENST00000584672 IGSF9Q9P2J2 1179 aa16.06■□□□□ 0.16
CSNK1D-224ENST00000584672 KLRC2P26717 231 aa16.05■□□□□ 0.16
CSNK1D-224ENST00000584672 ZNF76P36508 570 aa16.05■□□□□ 0.16
CSNK1D-224ENST00000584672 TBC1D8BQ0IIM8 1120 aa16.05■□□□□ 0.16
CSNK1D-224ENST00000584672 PTPN14Q15678 1187 aa16.05■□□□□ 0.16
CSNK1D-224ENST00000584672 EFCAB12Q6NXP0 572 aa16.05■□□□□ 0.16
CSNK1D-224ENST00000584672 MIS18BP1Q6P0N0 1132 aa16.05■□□□□ 0.16
CSNK1D-224ENST00000584672 DDX53Q86TM3 631 aaKnown RBP16.05■□□□□ 0.16
CSNK1D-224ENST00000584672 CHD1LQ86WJ1 897 aa16.05■□□□□ 0.16
CSNK1D-224ENST00000584672 MB21D2Q8IYB1 491 aaPredicted RBP16.05■□□□□ 0.16
CSNK1D-224ENST00000584672 GPR152Q8TDT2 470 aa16.05■□□□□ 0.16
CSNK1D-224ENST00000584672 IGSF21Q96ID5 467 aa16.05■□□□□ 0.16
CSNK1D-224ENST00000584672 MAP7D2Q96T17 732 aa16.05■□□□□ 0.16
CSNK1D-224ENST00000584672 LZTS2Q9BRK4 669 aa16.05■□□□□ 0.16
CSNK1D-224ENST00000584672 ADAMTS10Q9H324 1103 aa16.05■□□□□ 0.16
CSNK1D-224ENST00000584672 OSBPL3Q9H4L5 887 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms