RNA–Protein interactions for RNA: ENST00000584250.1

TTC39C-209, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 1 (best) BASIC

Gene TTC39C, Length 1,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-209ENST00000584250 TSPYL2Q9H2G4 693 aaPredicted RBP27.76■■■□□ 2.03
TTC39C-209ENST00000584250 TUFT1Q9NNX1 390 aa27.76■■■□□ 2.03
TTC39C-209ENST00000584250 COL4A6Q14031 1691 aa27.75■■■□□ 2.03
TTC39C-209ENST00000584250 DARSP14868 501 aaKnown RBP27.75■■■□□ 2.03
TTC39C-209ENST00000584250 IBSPP21815 317 aaPredicted RBP27.75■■■□□ 2.03
TTC39C-209ENST00000584250 EIF4BP23588 611 aaKnown RBP27.75■■■□□ 2.03
TTC39C-209ENST00000584250 RARRES1P49788 294 aa27.75■■■□□ 2.03
TTC39C-209ENST00000584250 ATP2C1P98194 919 aaPredicted RBP27.75■■■□□ 2.03
TTC39C-209ENST00000584250 ADGRE1Q14246 886 aa27.75■■■□□ 2.03
TTC39C-209ENST00000584250 FAM173BQ6P4H8 233 aa27.75■■■□□ 2.03
TTC39C-209ENST00000584250 IGSF22Q8N9C0 903 aa27.75■■■□□ 2.03
TTC39C-209ENST00000584250 NLRP7Q8WX94 980 aa27.75■■■□□ 2.03
TTC39C-209ENST00000584250 SLC7A3Q8WY07 619 aa27.75■■■□□ 2.03
TTC39C-209ENST00000584250 SCLT1Q96NL6 688 aa27.75■■■□□ 2.03
TTC39C-209ENST00000584250 ANKEF1Q9NU02 776 aa27.75■■■□□ 2.03
TTC39C-209ENST00000584250 LRWD1Q9UFC0 647 aa27.75■■■□□ 2.03
TTC39C-209ENST00000584250 STXBP5LQ9Y2K9 1186 aa27.75■■■□□ 2.03
TTC39C-209ENST00000584250 LINC01553A4QN01 128 aa27.74■■■□□ 2.03
TTC39C-209ENST00000584250 RPA1P27694 616 aa27.74■■■□□ 2.03
TTC39C-209ENST00000584250 RFC5P40937 340 aa27.74■■■□□ 2.03
TTC39C-209ENST00000584250 DNM2P50570 870 aa27.74■■■□□ 2.03
TTC39C-209ENST00000584250 RESTQ13127 1097 aa27.74■■■□□ 2.03
TTC39C-209ENST00000584250 CRIPAKQ8N1N5 446 aa27.74■■■□□ 2.03
TTC39C-209ENST00000584250 PRPF31Q8WWY3 499 aaKnown RBP27.74■■■□□ 2.03
TTC39C-209ENST00000584250 ADAM2Q99965 735 aa27.74■■■□□ 2.03
TTC39C-209ENST00000584250 PDCP20941 246 aa27.73■■■□□ 2.03
TTC39C-209ENST00000584250 CCT6AP40227 531 aaKnown RBP27.73■■■□□ 2.03
TTC39C-209ENST00000584250 PRPHP41219 470 aa27.73■■■□□ 2.03
TTC39C-209ENST00000584250 DSC3Q14574 896 aa27.73■■■□□ 2.03
TTC39C-209ENST00000584250 HSCBQ8IWL3 235 aa27.73■■■□□ 2.03
TTC39C-209ENST00000584250 NLRP4Q96MN2 994 aa27.73■■■□□ 2.03
TTC39C-209ENST00000584250 FTHL17Q9BXU8 183 aa27.73■■■□□ 2.03
TTC39C-209ENST00000584250 MTUS1Q9ULD2 1270 aa27.73■■■□□ 2.03
TTC39C-209ENST00000584250 MTMR6Q9Y217 621 aa27.73■■■□□ 2.03
TTC39C-209ENST00000584250 INSL6Q9Y581 213 aa27.73■■■□□ 2.03
TTC39C-209ENST00000584250 COL6A3P12111 3177 aa27.72■■■□□ 2.03
TTC39C-209ENST00000584250 GPR182O15218 404 aa27.72■■■□□ 2.03
TTC39C-209ENST00000584250 GATMP50440 423 aa27.72■■■□□ 2.03
TTC39C-209ENST00000584250 BRAPQ7Z569 592 aa27.72■■■□□ 2.03
TTC39C-209ENST00000584250 SP7Q8TDD2 431 aaPredicted RBP27.72■■■□□ 2.03
TTC39C-209ENST00000584250 ARNTL2Q8WYA1 636 aa27.72■■■□□ 2.03
TTC39C-209ENST00000584250 JPH2Q9BR39 696 aaPredicted RBP27.72■■■□□ 2.03
TTC39C-209ENST00000584250 MMTAG2Q9BU76 263 aaKnown RBP27.72■■■□□ 2.03
TTC39C-209ENST00000584250 IFT122Q9HBG6 1241 aa27.72■■■□□ 2.03
TTC39C-209ENST00000584250 PPME1Q9Y570 386 aa27.72■■■□□ 2.03
TTC39C-209ENST00000584250 COL4A3BPQ9Y5P4 624 aa27.72■■■□□ 2.03
TTC39C-209ENST00000584250 LAD1O00515 517 aa27.71■■■□□ 2.03
TTC39C-209ENST00000584250 USO1O60763 962 aaKnown RBP27.71■■■□□ 2.03
TTC39C-209ENST00000584250 LAMTOR4Q0VGL1 99 aa27.71■■■□□ 2.03
TTC39C-209ENST00000584250 PDIA5Q14554 519 aa27.71■■■□□ 2.03
TTC39C-209ENST00000584250 DTHD1Q6ZMT9 781 aa27.71■■■□□ 2.03
TTC39C-209ENST00000584250 ERMNQ8TAM6 284 aa27.71■■■□□ 2.03
TTC39C-209ENST00000584250 YME1L1Q96TA2 773 aa27.71■■■□□ 2.03
TTC39C-209ENST00000584250 MTRQ99707 1265 aa27.71■■■□□ 2.03
TTC39C-209ENST00000584250 RC3H2Q9HBD1 1191 aaKnown RBP27.71■■■□□ 2.03
TTC39C-209ENST00000584250 SRGAP2CP0DJJ0 459 aa27.7■■■□□ 2.02
TTC39C-209ENST00000584250 FOSL2P15408 326 aa27.7■■■□□ 2.02
TTC39C-209ENST00000584250 MAEAQ7L5Y9 396 aa27.7■■■□□ 2.02
TTC39C-209ENST00000584250 SPRYD3Q8NCJ5 442 aa27.7■■■□□ 2.02
TTC39C-209ENST00000584250 ASAP3Q8TDY4 903 aa27.7■■■□□ 2.02
TTC39C-209ENST00000584250 SNX29Q8TEQ0 813 aa27.7■■■□□ 2.02
TTC39C-209ENST00000584250 PSPC1Q8WXF1 523 aaKnown RBP27.7■■■□□ 2.02
TTC39C-209ENST00000584250 C17orf80Q9BSJ5 609 aa27.7■■■□□ 2.02
TTC39C-209ENST00000584250 GCOM2Q9BZD3 368 aaPredicted RBP27.7■■■□□ 2.02
TTC39C-209ENST00000584250 MINDY3Q9H8M7 445 aa27.7■■■□□ 2.02
TTC39C-209ENST00000584250 GPRC5CQ9NQ84 441 aa27.7■■■□□ 2.02
TTC39C-209ENST00000584250 RGS18Q9NS28 235 aa27.7■■■□□ 2.02
TTC39C-209ENST00000584250 VWA3AA6NCI4 1184 aa27.69■■■□□ 2.02
TTC39C-209ENST00000584250 C9IYK1 514 aa27.69■■■□□ 2.02
TTC39C-209ENST00000584250 XRCC6P12956 609 aaKnown RBP eCLIP27.69■■■□□ 2.02
TTC39C-209ENST00000584250 GRIN1Q05586 938 aa27.69■■■□□ 2.02
TTC39C-209ENST00000584250 ZNF410Q86VK4 478 aa27.69■■■□□ 2.02
TTC39C-209ENST00000584250 NACC1Q96RE7 527 aa27.69■■■□□ 2.02
TTC39C-209ENST00000584250 ATP6V0A4Q9HBG4 840 aa27.69■■■□□ 2.02
TTC39C-209ENST00000584250 DBR1Q9UK59 544 aaKnown RBP27.69■■■□□ 2.02
TTC39C-209ENST00000584250 KIAA1024Q9UPX6 916 aa27.69■■■□□ 2.02
TTC39C-209ENST00000584250 CLIC4Q9Y696 253 aa27.69■■■□□ 2.02
TTC39C-209ENST00000584250 DENND3A2RUS2 1198 aa27.68■■■□□ 2.02
TTC39C-209ENST00000584250 DGAT1O75907 488 aa27.68■■■□□ 2.02
TTC39C-209ENST00000584250 DGKIO75912 1065 aa27.68■■■□□ 2.02
TTC39C-209ENST00000584250 SF3A1Q15459 793 aaKnown RBP27.68■■■□□ 2.02
TTC39C-209ENST00000584250 KCNK18Q7Z418 384 aa27.68■■■□□ 2.02
TTC39C-209ENST00000584250 ZNF710Q8N1W2 664 aa27.68■■■□□ 2.02
TTC39C-209ENST00000584250 ZNF689Q96CS4 500 aaPredicted RBP27.68■■■□□ 2.02
TTC39C-209ENST00000584250 CCDC43Q96MW1 224 aaKnown RBP27.68■■■□□ 2.02
TTC39C-209ENST00000584250 POLD4Q9HCU8 107 aa27.68■■■□□ 2.02
TTC39C-209ENST00000584250 DDX19AQ9NUU7 478 aaKnown RBP27.68■■■□□ 2.02
TTC39C-209ENST00000584250 STX6O43752 255 aa27.67■■■□□ 2.02
TTC39C-209ENST00000584250 ARL2P36404 184 aa27.67■■■□□ 2.02
TTC39C-209ENST00000584250 SARSP49591 514 aaKnown RBP27.67■■■□□ 2.02
TTC39C-209ENST00000584250 ODR4Q5SWX8 454 aa27.67■■■□□ 2.02
TTC39C-209ENST00000584250 HAUS3Q68CZ6 603 aa27.67■■■□□ 2.02
TTC39C-209ENST00000584250 NPAS4Q8IUM7 802 aa27.67■■■□□ 2.02
TTC39C-209ENST00000584250 EXOC8Q8IYI6 725 aa27.67■■■□□ 2.02
TTC39C-209ENST00000584250 TCP11Q8WWU5 503 aa27.67■■■□□ 2.02
TTC39C-209ENST00000584250 COL4A4P53420 1690 aaPredicted RBP27.66■■■□□ 2.02
TTC39C-209ENST00000584250 E9PMD0 336 aa27.66■■■□□ 2.02
TTC39C-209ENST00000584250 GAS2O43903 313 aaKnown RBP27.66■■■□□ 2.02
TTC39C-209ENST00000584250 LINC00271P0C7V0 271 aa27.66■■■□□ 2.02
TTC39C-209ENST00000584250 ERVK-21P61565 698 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms