RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 GJA8P48165 433 aa12.62□□□□□ -0.39
CDK5RAP3-231ENST00000584063 VAV2P52735 878 aa12.62□□□□□ -0.39
CDK5RAP3-231ENST00000584063 GNGT1P63211 74 aa12.62□□□□□ -0.39
CDK5RAP3-231ENST00000584063 PRAMEF18Q5VWM3 479 aa12.62□□□□□ -0.39
CDK5RAP3-231ENST00000584063 BCAS4Q8TDM0 211 aa12.62□□□□□ -0.39
CDK5RAP3-231ENST00000584063 TBC1D31Q96DN5 1066 aa12.62□□□□□ -0.39
CDK5RAP3-231ENST00000584063 OSBPL9Q96SU4 736 aa12.62□□□□□ -0.39
CDK5RAP3-231ENST00000584063 C7orf25Q9BPX7 421 aa12.62□□□□□ -0.39
CDK5RAP3-231ENST00000584063 PYM1Q9BRP8 204 aaKnown RBP12.62□□□□□ -0.39
CDK5RAP3-231ENST00000584063 NDST4Q9H3R1 872 aa12.62□□□□□ -0.39
CDK5RAP3-231ENST00000584063 SPATA7Q9P0W8 599 aa12.62□□□□□ -0.39
CDK5RAP3-231ENST00000584063 SEL1LQ9UBV2 794 aa12.62□□□□□ -0.39
CDK5RAP3-231ENST00000584063 ZNF70Q9UC06 446 aaPredicted RBP12.62□□□□□ -0.39
CDK5RAP3-231ENST00000584063 SNX12Q9UMY4 172 aa12.62□□□□□ -0.39
CDK5RAP3-231ENST00000584063 CDK5RAP2Q96SN8 1893 aa12.62□□□□□ -0.39
CDK5RAP3-231ENST00000584063 A0A1W2PQC6 194 aa12.62□□□□□ -0.39
CDK5RAP3-231ENST00000584063 E9PMD0 336 aa12.62□□□□□ -0.39
CDK5RAP3-231ENST00000584063 VIL1P09327 827 aaKnown RBP12.62□□□□□ -0.39
CDK5RAP3-231ENST00000584063 GNA11P29992 359 aa12.62□□□□□ -0.39
CDK5RAP3-231ENST00000584063 PRPHP41219 470 aa12.62□□□□□ -0.39
CDK5RAP3-231ENST00000584063 ADCY7P51828 1080 aa12.62□□□□□ -0.39
CDK5RAP3-231ENST00000584063 TGFB2P61812 414 aa12.62□□□□□ -0.39
CDK5RAP3-231ENST00000584063 AMPD3Q01432 767 aa12.62□□□□□ -0.39
CDK5RAP3-231ENST00000584063 TUBB2AQ13885 445 aa12.62□□□□□ -0.39
CDK5RAP3-231ENST00000584063 MEA1Q16626 185 aa12.62□□□□□ -0.39
CDK5RAP3-231ENST00000584063 CIAPIN1Q6FI81 312 aa12.62□□□□□ -0.39
CDK5RAP3-231ENST00000584063 BHMTQ93088 406 aa12.62□□□□□ -0.39
CDK5RAP3-231ENST00000584063 PLEKHG4BQ96PX9 1271 aa12.62□□□□□ -0.39
CDK5RAP3-231ENST00000584063 P2RX7Q99572 595 aaKnown RBP12.62□□□□□ -0.39
CDK5RAP3-231ENST00000584063 TUBB2BQ9BVA1 445 aa12.62□□□□□ -0.39
CDK5RAP3-231ENST00000584063 IDI2Q9BXS1 227 aa12.62□□□□□ -0.39
CDK5RAP3-231ENST00000584063 RIOX1Q9H6W3 641 aa12.62□□□□□ -0.39
CDK5RAP3-231ENST00000584063 NFU1Q9UMS0 254 aa12.62□□□□□ -0.39
CDK5RAP3-231ENST00000584063 IKBKGQ9Y6K9 419 aa12.62□□□□□ -0.39
CDK5RAP3-231ENST00000584063 C10orf71Q711Q0 1435 aa12.62□□□□□ -0.39
CDK5RAP3-231ENST00000584063 BACH1O14867 736 aa12.61□□□□□ -0.39
CDK5RAP3-231ENST00000584063 TACC1O75410 805 aa12.61□□□□□ -0.39
CDK5RAP3-231ENST00000584063 CARSP49589 748 aaKnown RBP12.61□□□□□ -0.39
CDK5RAP3-231ENST00000584063 RRP1BQ14684 758 aaKnown RBP12.61□□□□□ -0.39
CDK5RAP3-231ENST00000584063 USH1GQ495M9 461 aa12.61□□□□□ -0.39
CDK5RAP3-231ENST00000584063 SLFN13Q68D06 897 aa12.61□□□□□ -0.39
CDK5RAP3-231ENST00000584063 SV2BQ7L1I2 683 aa12.61□□□□□ -0.39
CDK5RAP3-231ENST00000584063 LARP4BQ92615 738 aaKnown RBP12.61□□□□□ -0.39
CDK5RAP3-231ENST00000584063 DDX12PQ92771 950 aa12.61□□□□□ -0.39
CDK5RAP3-231ENST00000584063 HAS1Q92839 578 aa12.61□□□□□ -0.39
CDK5RAP3-231ENST00000584063 NACC2Q96BF6 587 aa12.61□□□□□ -0.39
CDK5RAP3-231ENST00000584063 CDK5RAP3Q96JB5 506 aa12.61□□□□□ -0.39
CDK5RAP3-231ENST00000584063 PACSIN1Q9BY11 444 aa12.61□□□□□ -0.39
CDK5RAP3-231ENST00000584063 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.61□□□□□ -0.39
CDK5RAP3-231ENST00000584063 COL4A3BPQ9Y5P4 624 aa12.61□□□□□ -0.39
CDK5RAP3-231ENST00000584063 FGFR1OPO95684 399 aaKnown RBP12.61□□□□□ -0.39
CDK5RAP3-231ENST00000584063 GLI1P08151 1106 aa12.61□□□□□ -0.39
CDK5RAP3-231ENST00000584063 CYP11B2P19099 503 aa12.61□□□□□ -0.39
CDK5RAP3-231ENST00000584063 ECE1P42892 770 aa12.61□□□□□ -0.39
CDK5RAP3-231ENST00000584063 IRAK1P51617 712 aa12.61□□□□□ -0.39
CDK5RAP3-231ENST00000584063 SH3BGRP55822 239 aaPredicted RBP12.61□□□□□ -0.39
CDK5RAP3-231ENST00000584063 CKAP4Q07065 602 aaKnown RBP12.61□□□□□ -0.39
CDK5RAP3-231ENST00000584063 KLHL7Q8IXQ5 586 aa12.61□□□□□ -0.39
CDK5RAP3-231ENST00000584063 MYOCDQ8IZQ8 938 aa12.61□□□□□ -0.39
CDK5RAP3-231ENST00000584063 ZFPM2Q8WW38 1151 aa12.61□□□□□ -0.39
CDK5RAP3-231ENST00000584063 CALML4Q96GE6 196 aa12.61□□□□□ -0.39
CDK5RAP3-231ENST00000584063 DHTKD1Q96HY7 919 aaPredicted RBP12.61□□□□□ -0.39
CDK5RAP3-231ENST00000584063 EPAS1Q99814 870 aa12.61□□□□□ -0.39
CDK5RAP3-231ENST00000584063 TMEM98Q9Y2Y6 226 aa12.61□□□□□ -0.39
CDK5RAP3-231ENST00000584063 TMEM110-MUSTN1A8MSY1 372 aa12.6□□□□□ -0.39
CDK5RAP3-231ENST00000584063 NFKBIEO00221 500 aa12.6□□□□□ -0.39
CDK5RAP3-231ENST00000584063 WNT10BO00744 389 aa12.6□□□□□ -0.39
CDK5RAP3-231ENST00000584063 TPP2P29144 1249 aaPredicted RBP12.6□□□□□ -0.39
CDK5RAP3-231ENST00000584063 GUCY2DQ02846 1103 aa12.6□□□□□ -0.39
CDK5RAP3-231ENST00000584063 VWA3BQ502W6 1294 aa12.6□□□□□ -0.39
CDK5RAP3-231ENST00000584063 MTHFD1LQ6UB35 978 aa12.6□□□□□ -0.39
CDK5RAP3-231ENST00000584063 SH2D4AQ9H788 454 aa12.6□□□□□ -0.39
CDK5RAP3-231ENST00000584063 FZD1Q9UP38 647 aa12.6□□□□□ -0.39
CDK5RAP3-231ENST00000584063 ASTN2O75129 1339 aaPredicted RBP12.6□□□□□ -0.39
CDK5RAP3-231ENST00000584063 F5H6K3 240 aa12.6□□□□□ -0.39
CDK5RAP3-231ENST00000584063 USO1O60763 962 aaKnown RBP12.6□□□□□ -0.39
CDK5RAP3-231ENST00000584063 RPS6KA3P51812 740 aa12.6□□□□□ -0.39
CDK5RAP3-231ENST00000584063 KLRC3Q07444 240 aa12.6□□□□□ -0.39
CDK5RAP3-231ENST00000584063 EHHADHQ08426 723 aa12.6□□□□□ -0.39
CDK5RAP3-231ENST00000584063 FBXW10Q5XX13 1052 aa12.6□□□□□ -0.39
CDK5RAP3-231ENST00000584063 GALNT17Q6IS24 598 aa12.6□□□□□ -0.39
CDK5RAP3-231ENST00000584063 KRT77Q7Z794 578 aa12.6□□□□□ -0.39
CDK5RAP3-231ENST00000584063 SNX32Q86XE0 403 aa12.6□□□□□ -0.39
CDK5RAP3-231ENST00000584063 CDHR1Q96JP9 859 aa12.6□□□□□ -0.39
CDK5RAP3-231ENST00000584063 CCDC17Q96LX7 622 aa12.6□□□□□ -0.39
CDK5RAP3-231ENST00000584063 IKZF4Q9H2S9 585 aa12.6□□□□□ -0.39
CDK5RAP3-231ENST00000584063 EPB41L5Q9HCM4 733 aa12.6□□□□□ -0.39
CDK5RAP3-231ENST00000584063 LMCD1Q9NZU5 365 aa12.6□□□□□ -0.39
CDK5RAP3-231ENST00000584063 POTEB3A0JP26 581 aa12.59□□□□□ -0.39
CDK5RAP3-231ENST00000584063 POTECB2RU33 542 aa12.59□□□□□ -0.39
CDK5RAP3-231ENST00000584063 TRAF5O00463 557 aa12.59□□□□□ -0.39
CDK5RAP3-231ENST00000584063 MEIS1O00470 390 aa12.59□□□□□ -0.39
CDK5RAP3-231ENST00000584063 NEBLO76041 1014 aa12.59□□□□□ -0.39
CDK5RAP3-231ENST00000584063 S100BP04271 92 aaPredicted RBP12.59□□□□□ -0.39
CDK5RAP3-231ENST00000584063 RWDD2BP57060 319 aa12.59□□□□□ -0.39
CDK5RAP3-231ENST00000584063 POLR2FP61218 127 aaKnown RBP12.59□□□□□ -0.39
CDK5RAP3-231ENST00000584063 ZNF543Q08ER8 600 aa12.59□□□□□ -0.39
CDK5RAP3-231ENST00000584063 TTC31Q49AM3 519 aaPredicted RBP12.59□□□□□ -0.39
CDK5RAP3-231ENST00000584063 TTMPQ5BVD1 217 aa12.59□□□□□ -0.39
CDK5RAP3-231ENST00000584063 C8orf74Q6P047 294 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms