RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 TCF20Q9UGU0 1960 aaKnown RBP11.08□□□□□ -0.64
SKA2-208ENST00000583927 DDX11L8A8MPP1 907 aa11.08□□□□□ -0.64
SKA2-208ENST00000583927 C9IYK1 514 aa11.08□□□□□ -0.64
SKA2-208ENST00000583927 H3BNC9 293 aa11.08□□□□□ -0.64
SKA2-208ENST00000583927 RFXAPO00287 272 aa11.08□□□□□ -0.64
SKA2-208ENST00000583927 WNT7AO00755 349 aa11.08□□□□□ -0.64
SKA2-208ENST00000583927 MGEA5O60502 916 aa11.08□□□□□ -0.64
SKA2-208ENST00000583927 SLITRK3O94933 977 aa11.08□□□□□ -0.64
SKA2-208ENST00000583927 XRCC6P12956 609 aaKnown RBP eCLIP11.08□□□□□ -0.64
SKA2-208ENST00000583927 DARSP14868 501 aaKnown RBP11.08□□□□□ -0.64
SKA2-208ENST00000583927 RFC5P40937 340 aa11.08□□□□□ -0.64
SKA2-208ENST00000583927 NFX1Q12986 1120 aaKnown RBP11.08□□□□□ -0.64
SKA2-208ENST00000583927 MTERF2Q49AM1 385 aa11.08□□□□□ -0.64
SKA2-208ENST00000583927 NAALADL2Q58DX5 795 aa11.08□□□□□ -0.64
SKA2-208ENST00000583927 TRMT1LQ7Z2T5 733 aaKnown RBP11.08□□□□□ -0.64
SKA2-208ENST00000583927 TMEM192Q8IY95 271 aa11.08□□□□□ -0.64
SKA2-208ENST00000583927 FBXO22Q8NEZ5 403 aa11.08□□□□□ -0.64
SKA2-208ENST00000583927 ATXN2LQ8WWM7 1075 aaKnown RBP11.08□□□□□ -0.64
SKA2-208ENST00000583927 SLC7A3Q8WY07 619 aa11.08□□□□□ -0.64
SKA2-208ENST00000583927 RSPH1Q8WYR4 309 aa11.08□□□□□ -0.64
SKA2-208ENST00000583927 P2RX5Q93086 422 aa11.08□□□□□ -0.64
SKA2-208ENST00000583927 TMX3Q96JJ7 454 aa11.08□□□□□ -0.64
SKA2-208ENST00000583927 EIF2AK1Q9BQI3 630 aaKnown RBP11.08□□□□□ -0.64
SKA2-208ENST00000583927 C17orf80Q9BSJ5 609 aa11.08□□□□□ -0.64
SKA2-208ENST00000583927 TRAIPQ9BWF2 469 aa11.08□□□□□ -0.64
SKA2-208ENST00000583927 PLVAPQ9BX97 442 aa11.08□□□□□ -0.64
SKA2-208ENST00000583927 INO80BQ9C086 356 aaPredicted RBP11.08□□□□□ -0.64
SKA2-208ENST00000583927 CERS4Q9HA82 394 aa11.08□□□□□ -0.64
SKA2-208ENST00000583927 ANKEF1Q9NU02 776 aa11.08□□□□□ -0.64
SKA2-208ENST00000583927 WRAP73Q9P2S5 460 aaPredicted RBP11.08□□□□□ -0.64
SKA2-208ENST00000583927 GINS2Q9Y248 185 aa11.08□□□□□ -0.64
SKA2-208ENST00000583927 DENND3A2RUS2 1198 aa11.07□□□□□ -0.64
SKA2-208ENST00000583927 ASAP2O43150 1006 aa11.07□□□□□ -0.64
SKA2-208ENST00000583927 MUTP22033 750 aa11.07□□□□□ -0.64
SKA2-208ENST00000583927 YWHABP31946 246 aaKnown RBP11.07□□□□□ -0.64
SKA2-208ENST00000583927 BMPR1AP36894 532 aa11.07□□□□□ -0.64
SKA2-208ENST00000583927 GUCY1B3Q02153 619 aa11.07□□□□□ -0.64
SKA2-208ENST00000583927 POU5F1BQ06416 359 aa11.07□□□□□ -0.64
SKA2-208ENST00000583927 TMEM266Q2M3C6 531 aa11.07□□□□□ -0.64
SKA2-208ENST00000583927 NCAPH2Q6IBW4 605 aa11.07□□□□□ -0.64
SKA2-208ENST00000583927 MRPL38Q96DV4 380 aaKnown RBP11.07□□□□□ -0.64
SKA2-208ENST00000583927 DYDC2Q96IM9 177 aa11.07□□□□□ -0.64
SKA2-208ENST00000583927 ADAM2Q99965 735 aa11.07□□□□□ -0.64
SKA2-208ENST00000583927 GCOM2Q9BZD3 368 aaPredicted RBP11.07□□□□□ -0.64
SKA2-208ENST00000583927 CHST12Q9NRB3 414 aa11.07□□□□□ -0.64
SKA2-208ENST00000583927 TMEM161AQ9NX61 479 aa11.07□□□□□ -0.64
SKA2-208ENST00000583927 RGL1Q9NZL6 768 aa11.07□□□□□ -0.64
SKA2-208ENST00000583927 THEGQ9P2T0 379 aa11.07□□□□□ -0.64
SKA2-208ENST00000583927 TDRD15B5MCY1 1934 aaKnown RBP11.07□□□□□ -0.64
SKA2-208ENST00000583927 TMEM150BA6NC51 233 aa11.06□□□□□ -0.64
SKA2-208ENST00000583927 CD2BP2O95400 341 aaKnown RBP11.06□□□□□ -0.64
SKA2-208ENST00000583927 TXKP42681 527 aa11.06□□□□□ -0.64
SKA2-208ENST00000583927 NPEPPSP55786 919 aa11.06□□□□□ -0.64
SKA2-208ENST00000583927 DRP2Q13474 957 aa11.06□□□□□ -0.64
SKA2-208ENST00000583927 BTG3Q14201 252 aaPredicted RBP11.06□□□□□ -0.64
SKA2-208ENST00000583927 PCBP1Q15365 356 aaKnown RBP eCLIP11.06□□□□□ -0.641e-6■■■■□ 22.1
SKA2-208ENST00000583927 PTPROQ16827 1216 aa11.06□□□□□ -0.64
SKA2-208ENST00000583927 C4orf32Q8N8J7 132 aa11.06□□□□□ -0.64
SKA2-208ENST00000583927 GDPD5Q8WTR4 605 aa11.06□□□□□ -0.64
SKA2-208ENST00000583927 TCP11Q8WWU5 503 aa11.06□□□□□ -0.64
SKA2-208ENST00000583927 SYMPKQ92797 1274 aaKnown RBP11.06□□□□□ -0.64
SKA2-208ENST00000583927 CEP170P1Q96L14 293 aa11.06□□□□□ -0.64
SKA2-208ENST00000583927 C11orf84Q9BUA3 381 aaPredicted RBP11.06□□□□□ -0.64
SKA2-208ENST00000583927 POLR3CQ9BUI4 534 aaPredicted RBP11.06□□□□□ -0.64
SKA2-208ENST00000583927 BACH2Q9BYV9 841 aa11.06□□□□□ -0.64
SKA2-208ENST00000583927 LMAN2LQ9H0V9 348 aa11.06□□□□□ -0.64
SKA2-208ENST00000583927 TMEM60Q9H2L4 133 aa11.06□□□□□ -0.64
SKA2-208ENST00000583927 TUFT1Q9NNX1 390 aa11.06□□□□□ -0.64
SKA2-208ENST00000583927 DACT1Q9NYF0 836 aa11.06□□□□□ -0.64
SKA2-208ENST00000583927 SUCLA2Q9P2R7 463 aaPredicted RBP11.06□□□□□ -0.64
SKA2-208ENST00000583927 NOL7Q9UMY1 257 aaKnown RBP11.06□□□□□ -0.64
SKA2-208ENST00000583927 COG5Q9UP83 839 aa11.06□□□□□ -0.64
SKA2-208ENST00000583927 PCDHB7Q9Y5E2 793 aa11.06□□□□□ -0.64
SKA2-208ENST00000583927 TRIP11Q15643 1979 aa11.05□□□□□ -0.64
SKA2-208ENST00000583927 A0A0U1RQF3 1178 aa11.05□□□□□ -0.64
SKA2-208ENST00000583927 RBAK-RBAKDNI3L0D1 243 aa11.05□□□□□ -0.64
SKA2-208ENST00000583927 LAD1O00515 517 aa11.05□□□□□ -0.64
SKA2-208ENST00000583927 HOXA2O43364 376 aa11.05□□□□□ -0.64
SKA2-208ENST00000583927 DGAT1O75907 488 aa11.05□□□□□ -0.64
SKA2-208ENST00000583927 EOMESO95936 686 aa11.05□□□□□ -0.64
SKA2-208ENST00000583927 ZSCAN20P17040 1043 aaPredicted RBP11.05□□□□□ -0.64
SKA2-208ENST00000583927 RPA1P27694 616 aa11.05□□□□□ -0.64
SKA2-208ENST00000583927 MCM7P33993 719 aa11.05□□□□□ -0.64
SKA2-208ENST00000583927 FXR2P51116 673 aaKnown RBP eCLIP11.05□□□□□ -0.64
SKA2-208ENST00000583927 FOSBP53539 338 aa11.05□□□□□ -0.64
SKA2-208ENST00000583927 POLGP54098 1239 aaPredicted RBP11.05□□□□□ -0.64
SKA2-208ENST00000583927 GNL2Q13823 731 aaKnown RBP11.05□□□□□ -0.64
SKA2-208ENST00000583927 PDIA5Q14554 519 aa11.05□□□□□ -0.64
SKA2-208ENST00000583927 MXD4Q14582 209 aaPredicted RBP11.05□□□□□ -0.64
SKA2-208ENST00000583927 TJAP1Q5JTD0 557 aa11.05□□□□□ -0.64
SKA2-208ENST00000583927 TTC38Q5R3I4 469 aa11.05□□□□□ -0.64
SKA2-208ENST00000583927 PLA2G4FQ68DD2 849 aa11.05□□□□□ -0.64
SKA2-208ENST00000583927 SRGAP1Q7Z6B7 1085 aa11.05□□□□□ -0.64
SKA2-208ENST00000583927 IFNLR1Q8IU57 520 aaPredicted RBP11.05□□□□□ -0.64
SKA2-208ENST00000583927 TPH2Q8IWU9 490 aa11.05□□□□□ -0.64
SKA2-208ENST00000583927 NLRP7Q8WX94 980 aa11.05□□□□□ -0.64
SKA2-208ENST00000583927 PSPC1Q8WXF1 523 aaKnown RBP11.05□□□□□ -0.64
SKA2-208ENST00000583927 IFT122Q9HBG6 1241 aa11.05□□□□□ -0.64
SKA2-208ENST00000583927 DAXXQ9UER7 740 aaPredicted RBP11.05□□□□□ -0.64
SKA2-208ENST00000583927 DBR1Q9UK59 544 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms