RNA–Protein interactions for RNA: ENST00000583818.1

TSEN54-211, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 765 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-211ENST00000583818 YME1L1Q96TA2 773 aa18.84■□□□□ 0.61
TSEN54-211ENST00000583818 FDXACB1Q9BRP7 624 aaPredicted RBP18.84■□□□□ 0.61
TSEN54-211ENST00000583818 DHX33Q9H6R0 707 aaKnown RBP18.84■□□□□ 0.61
TSEN54-211ENST00000583818 PRUNE2Q8WUY3 3088 aa18.83■□□□□ 0.61
TSEN54-211ENST00000583818 DARSP14868 501 aaKnown RBP18.83■□□□□ 0.6
TSEN54-211ENST00000583818 SYT1P21579 422 aa18.83■□□□□ 0.6
TSEN54-211ENST00000583818 CDC25AP30304 524 aa18.83■□□□□ 0.6
TSEN54-211ENST00000583818 GATMP50440 423 aa18.83■□□□□ 0.6
TSEN54-211ENST00000583818 DNM2P50570 870 aa18.83■□□□□ 0.6
TSEN54-211ENST00000583818 HTRA4P83105 476 aaPredicted RBP18.83■□□□□ 0.6
TSEN54-211ENST00000583818 RILPL1Q5EBL4 403 aa18.83■□□□□ 0.6
TSEN54-211ENST00000583818 PRPF31Q8WWY3 499 aaKnown RBP18.83■□□□□ 0.6
TSEN54-211ENST00000583818 CCDC43Q96MW1 224 aaKnown RBP18.83■□□□□ 0.6
TSEN54-211ENST00000583818 ADAM2Q99965 735 aa18.83■□□□□ 0.6
TSEN54-211ENST00000583818 TSPYL2Q9H2G4 693 aaPredicted RBP18.83■□□□□ 0.6
TSEN54-211ENST00000583818 XPNPEP1Q9NQW7 623 aa18.83■□□□□ 0.6
TSEN54-211ENST00000583818 LRWD1Q9UFC0 647 aa18.83■□□□□ 0.6
TSEN54-211ENST00000583818 INSL6Q9Y581 213 aa18.83■□□□□ 0.6
TSEN54-211ENST00000583818 TRANK1O15050 2925 aa18.82■□□□□ 0.6
TSEN54-211ENST00000583818 GPR182O15218 404 aa18.82■□□□□ 0.6
TSEN54-211ENST00000583818 USO1O60763 962 aaKnown RBP18.82■□□□□ 0.6
TSEN54-211ENST00000583818 LYPLA2O95372 231 aa18.82■□□□□ 0.6
TSEN54-211ENST00000583818 SRGAP2CP0DJJ0 459 aa18.82■□□□□ 0.6
TSEN54-211ENST00000583818 IGFBP4P22692 258 aa18.82■□□□□ 0.6
TSEN54-211ENST00000583818 EIF4BP23588 611 aaKnown RBP18.82■□□□□ 0.6
TSEN54-211ENST00000583818 CCT6AP40227 531 aaKnown RBP18.82■□□□□ 0.6
TSEN54-211ENST00000583818 RFC5P40937 340 aa18.82■□□□□ 0.6
TSEN54-211ENST00000583818 RARRES1P49788 294 aa18.82■□□□□ 0.6
TSEN54-211ENST00000583818 FXR2P51116 673 aaKnown RBP eCLIP18.82■□□□□ 0.6
TSEN54-211ENST00000583818 FAM173BQ6P4H8 233 aa18.82■□□□□ 0.6
TSEN54-211ENST00000583818 MAEAQ7L5Y9 396 aa18.82■□□□□ 0.6
TSEN54-211ENST00000583818 HSCBQ8IWL3 235 aa18.82■□□□□ 0.6
TSEN54-211ENST00000583818 SPRYD3Q8NCJ5 442 aa18.82■□□□□ 0.6
TSEN54-211ENST00000583818 SNX21Q969T3 373 aa18.82■□□□□ 0.6
TSEN54-211ENST00000583818 C17orf80Q9BSJ5 609 aa18.82■□□□□ 0.6
TSEN54-211ENST00000583818 FTHL17Q9BXU8 183 aa18.82■□□□□ 0.6
TSEN54-211ENST00000583818 TUFT1Q9NNX1 390 aa18.82■□□□□ 0.6
TSEN54-211ENST00000583818 TTC3P53804 2025 aa18.82■□□□□ 0.6
TSEN54-211ENST00000583818 DENND3A2RUS2 1198 aa18.81■□□□□ 0.6
TSEN54-211ENST00000583818 ERMNQ8TAM6 284 aa18.81■□□□□ 0.6
TSEN54-211ENST00000583818 PPM1EQ8WY54 764 aa18.81■□□□□ 0.6
TSEN54-211ENST00000583818 INTS4Q96HW7 963 aaKnown RBP18.81■□□□□ 0.6
TSEN54-211ENST00000583818 GAS2L1Q99501 681 aaPredicted RBP18.81■□□□□ 0.6
TSEN54-211ENST00000583818 MTRQ99707 1265 aa18.81■□□□□ 0.6
TSEN54-211ENST00000583818 JPH2Q9BR39 696 aaPredicted RBP18.81■□□□□ 0.6
TSEN54-211ENST00000583818 POLR3CQ9BUI4 534 aaPredicted RBP18.81■□□□□ 0.6
TSEN54-211ENST00000583818 ANKEF1Q9NU02 776 aa18.81■□□□□ 0.6
TSEN54-211ENST00000583818 COL4A3BPQ9Y5P4 624 aa18.81■□□□□ 0.6
TSEN54-211ENST00000583818 COL4A6Q14031 1691 aa18.81■□□□□ 0.6
TSEN54-211ENST00000583818 COL4A4P53420 1690 aaPredicted RBP18.8■□□□□ 0.6
TSEN54-211ENST00000583818 REV3LO60673 3130 aa18.8■□□□□ 0.6
TSEN54-211ENST00000583818 RPA1P27694 616 aa18.8■□□□□ 0.6
TSEN54-211ENST00000583818 ATP2C1P98194 919 aaPredicted RBP18.8■□□□□ 0.6
TSEN54-211ENST00000583818 LAMTOR4Q0VGL1 99 aa18.8■□□□□ 0.6
TSEN54-211ENST00000583818 DSC3Q14574 896 aa18.8■□□□□ 0.6
TSEN54-211ENST00000583818 PAN2Q504Q3 1202 aaKnown RBP18.8■□□□□ 0.6
TSEN54-211ENST00000583818 DTHD1Q6ZMT9 781 aa18.8■□□□□ 0.6
TSEN54-211ENST00000583818 IGSF22Q8N9C0 903 aa18.8■□□□□ 0.6
TSEN54-211ENST00000583818 MAFAQ8NHW3 353 aaPredicted RBP18.8■□□□□ 0.6
TSEN54-211ENST00000583818 SP7Q8TDD2 431 aaPredicted RBP18.8■□□□□ 0.6
TSEN54-211ENST00000583818 SNX29Q8TEQ0 813 aa18.8■□□□□ 0.6
TSEN54-211ENST00000583818 GDPD5Q8WTR4 605 aa18.8■□□□□ 0.6
TSEN54-211ENST00000583818 PSPC1Q8WXF1 523 aaKnown RBP18.8■□□□□ 0.6
TSEN54-211ENST00000583818 GCOM2Q9BZD3 368 aaPredicted RBP18.8■□□□□ 0.6
TSEN54-211ENST00000583818 POLD4Q9HCU8 107 aa18.8■□□□□ 0.6
TSEN54-211ENST00000583818 GPRC5CQ9NQ84 441 aa18.8■□□□□ 0.6
TSEN54-211ENST00000583818 VWA3AA6NCI4 1184 aa18.79■□□□□ 0.6
TSEN54-211ENST00000583818 PDCP20941 246 aa18.79■□□□□ 0.6
TSEN54-211ENST00000583818 RESTQ13127 1097 aa18.79■□□□□ 0.6
TSEN54-211ENST00000583818 ZRSR1Q15695 479 aaKnown RBP18.79■□□□□ 0.6
TSEN54-211ENST00000583818 CRIPAKQ8N1N5 446 aa18.79■□□□□ 0.6
TSEN54-211ENST00000583818 MICALL1Q8N3F8 863 aa18.79■□□□□ 0.6
TSEN54-211ENST00000583818 ASAP3Q8TDY4 903 aa18.79■□□□□ 0.6
TSEN54-211ENST00000583818 MINDY3Q9H8M7 445 aa18.79■□□□□ 0.6
TSEN54-211ENST00000583818 ATP6V0A4Q9HBG4 840 aa18.79■□□□□ 0.6
TSEN54-211ENST00000583818 IFT122Q9HBG6 1241 aa18.79■□□□□ 0.6
TSEN54-211ENST00000583818 RGS18Q9NS28 235 aa18.79■□□□□ 0.6
TSEN54-211ENST00000583818 LRFN2Q9ULH4 789 aa18.79■□□□□ 0.6
TSEN54-211ENST00000583818 KIAA1024Q9UPX6 916 aa18.79■□□□□ 0.6
TSEN54-211ENST00000583818 MTMR6Q9Y217 621 aa18.79■□□□□ 0.6
TSEN54-211ENST00000583818 PPME1Q9Y570 386 aa18.79■□□□□ 0.6
TSEN54-211ENST00000583818 C9IYK1 514 aa18.78■□□□□ 0.6
TSEN54-211ENST00000583818 PRPHP41219 470 aa18.78■□□□□ 0.6
TSEN54-211ENST00000583818 SARSP49591 514 aaKnown RBP18.78■□□□□ 0.6
TSEN54-211ENST00000583818 CCDC85BQ15834 202 aaPredicted RBP18.78■□□□□ 0.6
TSEN54-211ENST00000583818 ODR4Q5SWX8 454 aa18.78■□□□□ 0.6
TSEN54-211ENST00000583818 FOXD4L5Q5VV16 416 aaPredicted RBP18.78■□□□□ 0.6
TSEN54-211ENST00000583818 HAUS3Q68CZ6 603 aa18.78■□□□□ 0.6
TSEN54-211ENST00000583818 BRAPQ7Z569 592 aa18.78■□□□□ 0.6
TSEN54-211ENST00000583818 ZNF410Q86VK4 478 aa18.78■□□□□ 0.6
TSEN54-211ENST00000583818 NPAS4Q8IUM7 802 aa18.78■□□□□ 0.6
TSEN54-211ENST00000583818 RNF149Q8NC42 400 aa18.78■□□□□ 0.6
TSEN54-211ENST00000583818 FOXD4L4Q8WXT5 416 aaPredicted RBP18.78■□□□□ 0.6
TSEN54-211ENST00000583818 NACC1Q96RE7 527 aa18.78■□□□□ 0.6
TSEN54-211ENST00000583818 TGS1Q96RS0 853 aaKnown RBP18.78■□□□□ 0.6
TSEN54-211ENST00000583818 PLIN2Q99541 437 aa18.78■□□□□ 0.6
TSEN54-211ENST00000583818 MMTAG2Q9BU76 263 aaKnown RBP18.78■□□□□ 0.6
TSEN54-211ENST00000583818 RC3H2Q9HBD1 1191 aaKnown RBP18.78■□□□□ 0.6
TSEN54-211ENST00000583818 DDX19AQ9NUU7 478 aaKnown RBP18.78■□□□□ 0.6
TSEN54-211ENST00000583818 CLIC4Q9Y696 253 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms