RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 IBSPP21815 317 aaPredicted RBP8.91□□□□□ -0.98
SMCHD1-210ENST00000583800 SMARCA1P28370 1054 aa8.91□□□□□ -0.98
SMCHD1-210ENST00000583800 NDUFV1P49821 464 aa8.91□□□□□ -0.98
SMCHD1-210ENST00000583800 GATMP50440 423 aa8.91□□□□□ -0.98
SMCHD1-210ENST00000583800 USP46P62068 366 aa8.91□□□□□ -0.98
SMCHD1-210ENST00000583800 NHLH1Q02575 133 aa8.91□□□□□ -0.98
SMCHD1-210ENST00000583800 RTN4RL1Q86UN2 441 aaPredicted RBP8.91□□□□□ -0.98
SMCHD1-210ENST00000583800 RNF135Q8IUD6 432 aa8.91□□□□□ -0.98
SMCHD1-210ENST00000583800 CMTR2Q8IYT2 770 aaKnown RBP8.91□□□□□ -0.98
SMCHD1-210ENST00000583800 MAP4K1Q92918 833 aa8.91□□□□□ -0.98
SMCHD1-210ENST00000583800 P2RX5Q93086 422 aa8.91□□□□□ -0.98
SMCHD1-210ENST00000583800 MRRFQ96E11 262 aaKnown RBP8.91□□□□□ -0.98
SMCHD1-210ENST00000583800 PGBD1Q96JS3 809 aa8.91□□□□□ -0.98
SMCHD1-210ENST00000583800 LZTS2Q9BRK4 669 aa8.91□□□□□ -0.98
SMCHD1-210ENST00000583800 PLVAPQ9BX97 442 aa8.91□□□□□ -0.98
SMCHD1-210ENST00000583800 LRRC2Q9BYS8 371 aa8.91□□□□□ -0.98
SMCHD1-210ENST00000583800 JPH1Q9HDC5 661 aaPredicted RBP8.91□□□□□ -0.98
SMCHD1-210ENST00000583800 JADE2Q9NQC1 790 aa8.91□□□□□ -0.98
SMCHD1-210ENST00000583800 PCDHA6Q9UN73 950 aa8.91□□□□□ -0.98
SMCHD1-210ENST00000583800 PCDHGC5Q9Y5F6 944 aa8.91□□□□□ -0.98
SMCHD1-210ENST00000583800 PCDHA8Q9Y5H6 950 aa8.91□□□□□ -0.98
SMCHD1-210ENST00000583800 WDFY4Q6ZS81 3184 aa8.9□□□□□ -0.98
SMCHD1-210ENST00000583800 IGSF9BQ9UPX0 1349 aa8.9□□□□□ -0.98
SMCHD1-210ENST00000583800 RRN3P2A6NIE6 340 aa8.9□□□□□ -0.98
SMCHD1-210ENST00000583800 M0QZ92 97 aa8.9□□□□□ -0.98
SMCHD1-210ENST00000583800 STXBP3O00186 592 aa8.9□□□□□ -0.98
SMCHD1-210ENST00000583800 ATP9BO43861 1147 aa8.9□□□□□ -0.98
SMCHD1-210ENST00000583800 SCG2P13521 617 aa8.9□□□□□ -0.98
SMCHD1-210ENST00000583800 MRE11P49959 708 aa8.9□□□□□ -0.98
SMCHD1-210ENST00000583800 GNAQP50148 359 aa8.9□□□□□ -0.98
SMCHD1-210ENST00000583800 PAK2Q13177 524 aa8.9□□□□□ -0.98
SMCHD1-210ENST00000583800 ADAM15Q13444 863 aa8.9□□□□□ -0.98
SMCHD1-210ENST00000583800 PLCB4Q15147 1175 aa8.9□□□□□ -0.98
SMCHD1-210ENST00000583800 TMEM266Q2M3C6 531 aa8.9□□□□□ -0.98
SMCHD1-210ENST00000583800 HERC4Q5GLZ8 1057 aaPredicted RBP8.9□□□□□ -0.98
SMCHD1-210ENST00000583800 LCE2CQ5TA81 110 aa8.9□□□□□ -0.98
SMCHD1-210ENST00000583800 IER5Q5VY09 327 aa8.9□□□□□ -0.98
SMCHD1-210ENST00000583800 TMTC3Q6ZXV5 915 aa8.9□□□□□ -0.98
SMCHD1-210ENST00000583800 HEATR3Q7Z4Q2 680 aa8.9□□□□□ -0.98
SMCHD1-210ENST00000583800 NPAS4Q8IUM7 802 aa8.9□□□□□ -0.98
SMCHD1-210ENST00000583800 KLHL23Q8NBE8 558 aa8.9□□□□□ -0.98
SMCHD1-210ENST00000583800 CYP2W1Q8TAV3 490 aa8.9□□□□□ -0.98
SMCHD1-210ENST00000583800 SPPL3Q8TCT6 385 aa8.9□□□□□ -0.98
SMCHD1-210ENST00000583800 LRRN4Q8WUT4 740 aa8.9□□□□□ -0.98
SMCHD1-210ENST00000583800 POF1BQ8WVV4 589 aa8.9□□□□□ -0.98
SMCHD1-210ENST00000583800 MSLNLQ96KJ4 702 aa8.9□□□□□ -0.98
SMCHD1-210ENST00000583800 POP1Q99575 1024 aaKnown RBP8.9□□□□□ -0.98
SMCHD1-210ENST00000583800 FTHL17Q9BXU8 183 aa8.9□□□□□ -0.98
SMCHD1-210ENST00000583800 UPF3BQ9BZI7 483 aaKnown RBP8.9□□□□□ -0.98
SMCHD1-210ENST00000583800 TMX1Q9H3N1 280 aa8.9□□□□□ -0.98
SMCHD1-210ENST00000583800 AZI2Q9H6S1 392 aa8.9□□□□□ -0.98
SMCHD1-210ENST00000583800 CLEC1BQ9P126 229 aa8.9□□□□□ -0.98
SMCHD1-210ENST00000583800 SLC9A2Q9UBY0 812 aa8.9□□□□□ -0.98
SMCHD1-210ENST00000583800 PADI3Q9ULW8 664 aa8.9□□□□□ -0.98
SMCHD1-210ENST00000583800 BARX2Q9UMQ3 279 aaPredicted RBP8.9□□□□□ -0.98
SMCHD1-210ENST00000583800 PCDHGC3Q9UN70 934 aa8.9□□□□□ -0.98
SMCHD1-210ENST00000583800 FCF1Q9Y324 198 aaKnown RBP8.9□□□□□ -0.98
SMCHD1-210ENST00000583800 TRIOO75962 3097 aa8.89□□□□□ -0.99
SMCHD1-210ENST00000583800 CNTNAP5Q8WYK1 1306 aa8.89□□□□□ -0.99
SMCHD1-210ENST00000583800 HOXA2O43364 376 aa8.89□□□□□ -0.99
SMCHD1-210ENST00000583800 MGEA5O60502 916 aa8.89□□□□□ -0.99
SMCHD1-210ENST00000583800 GLP2RO95838 553 aa8.89□□□□□ -0.99
SMCHD1-210ENST00000583800 STAG3L1P0CL83 205 aa8.89□□□□□ -0.99
SMCHD1-210ENST00000583800 CALM1P0DP23 149 aa8.89□□□□□ -0.99
SMCHD1-210ENST00000583800 CALM2P0DP24 149 aa8.89□□□□□ -0.99
SMCHD1-210ENST00000583800 CALM3P0DP25 149 aa8.89□□□□□ -0.99
SMCHD1-210ENST00000583800 ARP10275 920 aa8.89□□□□□ -0.99
SMCHD1-210ENST00000583800 MCM5P33992 734 aa8.89□□□□□ -0.99
SMCHD1-210ENST00000583800 NRIP1P48552 1158 aa8.89□□□□□ -0.99
SMCHD1-210ENST00000583800 ACTR2P61160 394 aa8.89□□□□□ -0.99
SMCHD1-210ENST00000583800 ITGB3BPQ13352 177 aaPredicted RBP8.89□□□□□ -0.99
SMCHD1-210ENST00000583800 WWC2Q6AWC2 1192 aa8.89□□□□□ -0.99
SMCHD1-210ENST00000583800 RBM23Q86U06 439 aaKnown RBP8.89□□□□□ -0.99
SMCHD1-210ENST00000583800 MICU3Q86XE3 530 aa8.89□□□□□ -0.99
SMCHD1-210ENST00000583800 EFHBQ8N7U6 833 aa8.89□□□□□ -0.99
SMCHD1-210ENST00000583800 PPP2R3CQ969Q6 453 aa8.89□□□□□ -0.99
SMCHD1-210ENST00000583800 TMEM87BQ96K49 555 aa8.89□□□□□ -0.99
SMCHD1-210ENST00000583800 MXRA8Q9BRK3 442 aa8.89□□□□□ -0.99
SMCHD1-210ENST00000583800 MTA3Q9BTC8 594 aa8.89□□□□□ -0.99
SMCHD1-210ENST00000583800 CELF4Q9BZC1 486 aaKnown RBP8.89□□□□□ -0.99
SMCHD1-210ENST00000583800 KCNH7Q9NS40 1196 aa8.89□□□□□ -0.99
SMCHD1-210ENST00000583800 LRFN2Q9ULH4 789 aa8.89□□□□□ -0.99
SMCHD1-210ENST00000583800 GINS2Q9Y248 185 aa8.89□□□□□ -0.99
SMCHD1-210ENST00000583800 PCDHA2Q9Y5H9 948 aa8.89□□□□□ -0.99
SMCHD1-210ENST00000583800 SLC12A7Q9Y666 1083 aa8.89□□□□□ -0.99
SMCHD1-210ENST00000583800 SQORQ9Y6N5 450 aa8.89□□□□□ -0.99
SMCHD1-210ENST00000583800 NFASCO94856 1347 aa8.88□□□□□ -0.99
SMCHD1-210ENST00000583800 KDM3AQ9Y4C1 1321 aa8.88□□□□□ -0.99
SMCHD1-210ENST00000583800 SMIM35A0A1B0GVV1 85 aa8.88□□□□□ -0.99
SMCHD1-210ENST00000583800 DDX39AO00148 427 aaKnown RBP8.88□□□□□ -0.99
SMCHD1-210ENST00000583800 SLC27A2O14975 620 aa8.88□□□□□ -0.99
SMCHD1-210ENST00000583800 MAFGO15525 162 aa8.88□□□□□ -0.99
SMCHD1-210ENST00000583800 PPFIA3O75145 1194 aa8.88□□□□□ -0.99
SMCHD1-210ENST00000583800 EYA4O95677 639 aa8.88□□□□□ -0.99
SMCHD1-210ENST00000583800 RPLP2P05387 115 aaKnown RBP8.88□□□□□ -0.99
SMCHD1-210ENST00000583800 LIFRP42702 1097 aa8.88□□□□□ -0.99
SMCHD1-210ENST00000583800 STAT5BP51692 787 aa8.88□□□□□ -0.99
SMCHD1-210ENST00000583800 RBM10P98175 930 aaKnown RBP8.88□□□□□ -0.99
SMCHD1-210ENST00000583800 KRT76Q01546 638 aa8.88□□□□□ -0.99
SMCHD1-210ENST00000583800 NAALADL2Q58DX5 795 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms