RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 BLACEA4D250 179 aa5.21□□□□□ -1.58
SMCHD1-209ENST00000583441 GSG1L2A8MUP6 293 aa5.21□□□□□ -1.58
SMCHD1-209ENST00000583441 ARNTLO00327 626 aa5.21□□□□□ -1.58
SMCHD1-209ENST00000583441 GUCY1A3Q02108 690 aa5.21□□□□□ -1.58
SMCHD1-209ENST00000583441 NFYCQ13952 458 aa5.21□□□□□ -1.58
SMCHD1-209ENST00000583441 UBE2R2Q712K3 238 aaPredicted RBP5.21□□□□□ -1.58
SMCHD1-209ENST00000583441 HDGFL2Q7Z4V5 671 aaPredicted RBP5.21□□□□□ -1.58
SMCHD1-209ENST00000583441 CHAMP1Q96JM3 812 aa5.21□□□□□ -1.58
SMCHD1-209ENST00000583441 TARS2Q9BW92 718 aaKnown RBP5.21□□□□□ -1.58
SMCHD1-209ENST00000583441 HECAQ9UBI9 543 aaPredicted RBP5.21□□□□□ -1.58
SMCHD1-209ENST00000583441 COX11Q9Y6N1 276 aa5.21□□□□□ -1.58
SMCHD1-209ENST00000583441 TCRBV16S1A1N1A0A5B0 115 aa5.2□□□□□ -1.58
SMCHD1-209ENST00000583441 H7BY64 318 aa5.2□□□□□ -1.58
SMCHD1-209ENST00000583441 ARVCFO00192 962 aa5.2□□□□□ -1.58
SMCHD1-209ENST00000583441 GSTA4O15217 222 aa5.2□□□□□ -1.58
SMCHD1-209ENST00000583441 CRTAMO95727 393 aa5.2□□□□□ -1.58
SMCHD1-209ENST00000583441 ENO2P09104 434 aaPredicted RBP5.2□□□□□ -1.58
SMCHD1-209ENST00000583441 SDSP20132 328 aa5.2□□□□□ -1.58
SMCHD1-209ENST00000583441 POU3F3P20264 500 aaPredicted RBP5.2□□□□□ -1.58
SMCHD1-209ENST00000583441 GRIN1Q05586 938 aa5.2□□□□□ -1.58
SMCHD1-209ENST00000583441 PAK1Q13153 545 aa5.2□□□□□ -1.58
SMCHD1-209ENST00000583441 CNNM4Q6P4Q7 775 aa5.2□□□□□ -1.58
SMCHD1-209ENST00000583441 LBX2Q6XYB7 198 aa5.2□□□□□ -1.58
SMCHD1-209ENST00000583441 RD3Q7Z3Z2 195 aa5.2□□□□□ -1.58
SMCHD1-209ENST00000583441 RNF180Q86T96 592 aa5.2□□□□□ -1.58
SMCHD1-209ENST00000583441 DDX53Q86TM3 631 aaKnown RBP5.2□□□□□ -1.58
SMCHD1-209ENST00000583441 CCDC103Q8IW40 242 aa5.2□□□□□ -1.58
SMCHD1-209ENST00000583441 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.2□□□□□ -1.58
SMCHD1-209ENST00000583441 TACO1Q9BSH4 297 aaKnown RBP5.2□□□□□ -1.58
SMCHD1-209ENST00000583441 MCM8Q9UJA3 840 aa5.2□□□□□ -1.58
SMCHD1-209ENST00000583441 TRAF6Q9Y4K3 522 aa5.2□□□□□ -1.58
SMCHD1-209ENST00000583441 TNPO3Q9Y5L0 923 aaKnown RBP5.2□□□□□ -1.58
SMCHD1-209ENST00000583441 KIAA0355O15063 1070 aa5.19□□□□□ -1.58
SMCHD1-209ENST00000583441 PDE6AP16499 860 aa5.19□□□□□ -1.58
SMCHD1-209ENST00000583441 MAPK7Q13164 816 aa5.19□□□□□ -1.58
SMCHD1-209ENST00000583441 TOP3AQ13472 1001 aaPredicted RBP5.19□□□□□ -1.58
SMCHD1-209ENST00000583441 FAM47CQ5HY64 1035 aa5.19□□□□□ -1.58
SMCHD1-209ENST00000583441 SPTY2D1Q68D10 685 aaPredicted RBP5.19□□□□□ -1.58
SMCHD1-209ENST00000583441 ZCCHC8Q6NZY4 707 aaKnown RBP5.19□□□□□ -1.58
SMCHD1-209ENST00000583441 KCNT2Q6UVM3 1135 aa5.19□□□□□ -1.58
SMCHD1-209ENST00000583441 OLFML1Q6UWY5 402 aa5.19□□□□□ -1.58
SMCHD1-209ENST00000583441 FGD2Q7Z6J4 655 aa5.19□□□□□ -1.58
SMCHD1-209ENST00000583441 RCBTB1Q8NDN9 531 aa5.19□□□□□ -1.58
SMCHD1-209ENST00000583441 TTLL11Q8NHH1 800 aa5.19□□□□□ -1.58
SMCHD1-209ENST00000583441 TMEM176AQ96HP8 235 aa5.19□□□□□ -1.58
SMCHD1-209ENST00000583441 SCLYQ96I15 445 aa5.19□□□□□ -1.58
SMCHD1-209ENST00000583441 TYW1Q9NV66 732 aaKnown RBP5.19□□□□□ -1.58
SMCHD1-209ENST00000583441 ASXL2Q76L83 1435 aa5.19□□□□□ -1.58
SMCHD1-209ENST00000583441 FAM47E-STBD1D6RA91 191 aa5.18□□□□□ -1.58
SMCHD1-209ENST00000583441 WNT9AO14904 365 aa5.18□□□□□ -1.58
SMCHD1-209ENST00000583441 RASGRP1O95267 797 aa5.18□□□□□ -1.58
SMCHD1-209ENST00000583441 IL18BPO95998 194 aa5.18□□□□□ -1.58
SMCHD1-209ENST00000583441 JMJD7P0C870 316 aa5.18□□□□□ -1.58
SMCHD1-209ENST00000583441 NEK4P51957 841 aa5.18□□□□□ -1.58
SMCHD1-209ENST00000583441 AMPD3Q01432 767 aa5.18□□□□□ -1.58
SMCHD1-209ENST00000583441 PFKPQ01813 784 aa5.18□□□□□ -1.58
SMCHD1-209ENST00000583441 LSAMPQ13449 338 aa5.18□□□□□ -1.58
SMCHD1-209ENST00000583441 CNGB1Q14028 1251 aaPredicted RBP5.18□□□□□ -1.58
SMCHD1-209ENST00000583441 PTPAQ15257 358 aa5.18□□□□□ -1.58
SMCHD1-209ENST00000583441 DHCR24Q15392 516 aa5.18□□□□□ -1.58
SMCHD1-209ENST00000583441 CFAP100Q494V2 611 aa5.18□□□□□ -1.58
SMCHD1-209ENST00000583441 LCE1EQ5T753 118 aa5.18□□□□□ -1.58
SMCHD1-209ENST00000583441 DDX46Q7L014 1031 aaKnown RBP5.18□□□□□ -1.58
SMCHD1-209ENST00000583441 GRASPQ7Z6J2 395 aaPredicted RBP5.18□□□□□ -1.58
SMCHD1-209ENST00000583441 KIF18BQ86Y91 864 aa5.18□□□□□ -1.58
SMCHD1-209ENST00000583441 ZC3H7AQ8IWR0 971 aaKnown RBP5.18□□□□□ -1.58
SMCHD1-209ENST00000583441 ORAI3Q9BRQ5 295 aa5.18□□□□□ -1.58
SMCHD1-209ENST00000583441 CELF4Q9BZC1 486 aaKnown RBP5.18□□□□□ -1.58
SMCHD1-209ENST00000583441 EPB41L1Q9H4G0 881 aa5.18□□□□□ -1.58
SMCHD1-209ENST00000583441 KRIT1O00522 736 aa5.17□□□□□ -1.58
SMCHD1-209ENST00000583441 SOD2P04179 222 aa5.17□□□□□ -1.58
SMCHD1-209ENST00000583441 GRK2P25098 689 aa5.17□□□□□ -1.58
SMCHD1-209ENST00000583441 GRK3P35626 688 aa5.17□□□□□ -1.58
SMCHD1-209ENST00000583441 ZNF460Q14592 562 aa5.17□□□□□ -1.58
SMCHD1-209ENST00000583441 TBR1Q16650 682 aa5.17□□□□□ -1.58
SMCHD1-209ENST00000583441 CFHR4Q92496 578 aa5.17□□□□□ -1.58
SMCHD1-209ENST00000583441 SYNPO2LQ9H987 977 aa5.17□□□□□ -1.58
SMCHD1-209ENST00000583441 ATP8A1Q9Y2Q0 1164 aa5.17□□□□□ -1.58
SMCHD1-209ENST00000583441 PCDHA9Q9Y5H5 950 aa5.17□□□□□ -1.58
SMCHD1-209ENST00000583441 PCDHA8Q9Y5H6 950 aa5.17□□□□□ -1.58
SMCHD1-209ENST00000583441 PCDHA2Q9Y5H9 948 aa5.17□□□□□ -1.58
SMCHD1-209ENST00000583441 ALG1L2C9J202 215 aa5.16□□□□□ -1.58
SMCHD1-209ENST00000583441 MSCO60682 206 aa5.16□□□□□ -1.58
SMCHD1-209ENST00000583441 LCP1P13796 627 aa5.16□□□□□ -1.58
SMCHD1-209ENST00000583441 ST5P78524 1137 aa5.16□□□□□ -1.58
SMCHD1-209ENST00000583441 CDCA2Q69YH5 1023 aaPredicted RBP5.16□□□□□ -1.58
SMCHD1-209ENST00000583441 GPR135Q8IZ08 494 aa5.16□□□□□ -1.58
SMCHD1-209ENST00000583441 SYNE4Q8N205 404 aa5.16□□□□□ -1.58
SMCHD1-209ENST00000583441 AFAP1L2Q8N4X5 818 aa5.16□□□□□ -1.58
SMCHD1-209ENST00000583441 C9orf106Q8NAJ2 232 aa5.16□□□□□ -1.58
SMCHD1-209ENST00000583441 OR2W6PQ8NHA6 318 aa5.16□□□□□ -1.58
SMCHD1-209ENST00000583441 PCDH19Q8TAB3 1148 aa5.16□□□□□ -1.58
SMCHD1-209ENST00000583441 SLC25A43Q8WUT9 341 aaPredicted RBP5.16□□□□□ -1.58
SMCHD1-209ENST00000583441 FBXW5Q969U6 566 aa5.16□□□□□ -1.58
SMCHD1-209ENST00000583441 WNK4Q96J92 1243 aa5.16□□□□□ -1.58
SMCHD1-209ENST00000583441 CABP5Q9NP86 173 aa5.16□□□□□ -1.58
SMCHD1-209ENST00000583441 CLDND1Q9NY35 253 aa5.16□□□□□ -1.58
SMCHD1-209ENST00000583441 SAMD15Q9P1V8 674 aa5.16□□□□□ -1.58
SMCHD1-209ENST00000583441 FBXL7Q9UJT9 491 aa5.16□□□□□ -1.58
SMCHD1-209ENST00000583441 TRAF5O00463 557 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms