RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 PLA2G4DQ86XP0 818 aa13.97□□□□□ -0.17
TOP3A-215ENST00000583328 FANCBQ8NB91 859 aa13.97□□□□□ -0.17
TOP3A-215ENST00000583328 RIC8AQ9NPQ8 531 aa13.97□□□□□ -0.17
TOP3A-215ENST00000583328 CYP26B1Q9NR63 512 aa13.97□□□□□ -0.17
TOP3A-215ENST00000583328 DZANK1Q9NVP4 752 aa13.97□□□□□ -0.17
TOP3A-215ENST00000583328 AKT3Q9Y243 479 aa13.97□□□□□ -0.17
TOP3A-215ENST00000583328 SLC12A7Q9Y666 1083 aa13.97□□□□□ -0.17
TOP3A-215ENST00000583328 SPTBN4Q9H254 2564 aa13.97□□□□□ -0.17
TOP3A-215ENST00000583328 PLXNA3P51805 1871 aa13.96□□□□□ -0.17
TOP3A-215ENST00000583328 MAGEB2O15479 319 aa13.96□□□□□ -0.17
TOP3A-215ENST00000583328 EOMESO95936 686 aa13.96□□□□□ -0.17
TOP3A-215ENST00000583328 TMOD1P28289 359 aa13.96□□□□□ -0.17
TOP3A-215ENST00000583328 LIFRP42702 1097 aa13.96□□□□□ -0.17
TOP3A-215ENST00000583328 CLCN3P51790 818 aa13.96□□□□□ -0.17
TOP3A-215ENST00000583328 NLRP11P59045 1033 aaKnown RBP13.96□□□□□ -0.17
TOP3A-215ENST00000583328 WWC2Q6AWC2 1192 aa13.96□□□□□ -0.17
TOP3A-215ENST00000583328 KIAA1841Q6NSI8 718 aa13.96□□□□□ -0.17
TOP3A-215ENST00000583328 VPS52Q8N1B4 723 aa13.96□□□□□ -0.17
TOP3A-215ENST00000583328 BBXQ8WY36 941 aaPredicted RBP13.96□□□□□ -0.17
TOP3A-215ENST00000583328 MAP4K1Q92918 833 aa13.96□□□□□ -0.17
TOP3A-215ENST00000583328 ACSF2Q96CM8 615 aaPredicted RBP13.96□□□□□ -0.17
TOP3A-215ENST00000583328 TMEM169Q96HH4 297 aa13.96□□□□□ -0.17
TOP3A-215ENST00000583328 USTQ9Y2C2 406 aa13.96□□□□□ -0.17
TOP3A-215ENST00000583328 RBM8AQ9Y5S9 174 aaKnown RBP13.96□□□□□ -0.17
TOP3A-215ENST00000583328 MYO10Q9HD67 2058 aa13.95□□□□□ -0.18
TOP3A-215ENST00000583328 FNDC1Q4ZHG4 1894 aaPredicted RBP13.95□□□□□ -0.18
TOP3A-215ENST00000583328 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.95□□□□□ -0.18
TOP3A-215ENST00000583328 SPDYE4A6NLX3 237 aa13.95□□□□□ -0.18
TOP3A-215ENST00000583328 SGSM2O43147 1006 aa13.95□□□□□ -0.18
TOP3A-215ENST00000583328 PI15O43692 258 aa13.95□□□□□ -0.18
TOP3A-215ENST00000583328 ADCY7P51828 1080 aa13.95□□□□□ -0.18
TOP3A-215ENST00000583328 BCAR1P56945 870 aa13.95□□□□□ -0.18
TOP3A-215ENST00000583328 CLLU1OSQ5K130 101 aa13.95□□□□□ -0.18
TOP3A-215ENST00000583328 CWF19L1Q69YN2 538 aaKnown RBP13.95□□□□□ -0.18
TOP3A-215ENST00000583328 EFCAB12Q6NXP0 572 aa13.95□□□□□ -0.18
TOP3A-215ENST00000583328 SYNE3Q6ZMZ3 975 aa13.95□□□□□ -0.18
TOP3A-215ENST00000583328 NIPA1Q7RTP0 329 aa13.95□□□□□ -0.18
TOP3A-215ENST00000583328 CABP7Q86V35 215 aa13.95□□□□□ -0.18
TOP3A-215ENST00000583328 HELQQ8TDG4 1101 aa13.95□□□□□ -0.18
TOP3A-215ENST00000583328 KCNG4Q8TDN1 519 aa13.95□□□□□ -0.18
TOP3A-215ENST00000583328 ZNF668Q96K58 619 aaPredicted RBP13.95□□□□□ -0.18
TOP3A-215ENST00000583328 MAP7D2Q96T17 732 aa13.95□□□□□ -0.18
TOP3A-215ENST00000583328 RTP3Q9BQQ7 232 aa13.95□□□□□ -0.18
TOP3A-215ENST00000583328 FBXL21Q9UKT6 434 aa13.95□□□□□ -0.18
TOP3A-215ENST00000583328 CEP131Q9UPN4 1083 aa13.95□□□□□ -0.18
TOP3A-215ENST00000583328 A0A0U1RQF3 1178 aa13.94□□□□□ -0.18
TOP3A-215ENST00000583328 SMCO2A6NFE2 343 aa13.94□□□□□ -0.18
TOP3A-215ENST00000583328 DHX15O43143 795 aaKnown RBP13.94□□□□□ -0.18
TOP3A-215ENST00000583328 EPCAMP16422 314 aa13.94□□□□□ -0.18
TOP3A-215ENST00000583328 AOC1P19801 751 aa13.94□□□□□ -0.18
TOP3A-215ENST00000583328 EIF4BP23588 611 aaKnown RBP13.94□□□□□ -0.18
TOP3A-215ENST00000583328 SREBF1P36956 1147 aa13.94□□□□□ -0.18
TOP3A-215ENST00000583328 GIT2Q14161 759 aa13.94□□□□□ -0.18
TOP3A-215ENST00000583328 ANGPT1Q15389 498 aa13.94□□□□□ -0.18
TOP3A-215ENST00000583328 TYW1BQ6NUM6 668 aa13.94□□□□□ -0.18
TOP3A-215ENST00000583328 TMC5Q6UXY8 1006 aa13.94□□□□□ -0.18
TOP3A-215ENST00000583328 MICU3Q86XE3 530 aa13.94□□□□□ -0.18
TOP3A-215ENST00000583328 TEX2Q8IWB9 1127 aa13.94□□□□□ -0.18
TOP3A-215ENST00000583328 AUTS2Q8WXX7 1259 aa13.94□□□□□ -0.18
TOP3A-215ENST00000583328 SCLT1Q96NL6 688 aa13.94□□□□□ -0.18
TOP3A-215ENST00000583328 MRPL9Q9BYD2 267 aaKnown RBP13.94□□□□□ -0.18
TOP3A-215ENST00000583328 LRRC2Q9BYS8 371 aa13.94□□□□□ -0.18
TOP3A-215ENST00000583328 ADAMTS10Q9H324 1103 aa13.94□□□□□ -0.18
TOP3A-215ENST00000583328 TCEAL9Q9UHQ7 104 aa13.94□□□□□ -0.18
TOP3A-215ENST00000583328 MAFBQ9Y5Q3 323 aaPredicted RBP13.94□□□□□ -0.18
TOP3A-215ENST00000583328 FAM86B1E9PN63 330 aa13.93□□□□□ -0.18
TOP3A-215ENST00000583328 IPO5O00410 1097 aaKnown RBP13.93□□□□□ -0.18
TOP3A-215ENST00000583328 STK25O00506 426 aa13.93□□□□□ -0.18
TOP3A-215ENST00000583328 PSAPP07602 524 aa13.93□□□□□ -0.18
TOP3A-215ENST00000583328 FAM86B2P0C5J1 330 aa13.93□□□□□ -0.18
TOP3A-215ENST00000583328 NPR3P17342 541 aa13.93□□□□□ -0.18
TOP3A-215ENST00000583328 AP3B2Q13367 1082 aa13.93□□□□□ -0.18
TOP3A-215ENST00000583328 TDGQ13569 410 aa13.93□□□□□ -0.18
TOP3A-215ENST00000583328 ZNF746Q6NUN9 644 aaPredicted RBP13.93□□□□□ -0.18
TOP3A-215ENST00000583328 PPP1R18Q6NYC8 613 aa13.93□□□□□ -0.18
TOP3A-215ENST00000583328 OTOP3Q7RTS5 596 aa13.93□□□□□ -0.18
TOP3A-215ENST00000583328 ZNF598Q86UK7 904 aaKnown RBP13.93□□□□□ -0.18
TOP3A-215ENST00000583328 CCDC105Q8IYK2 499 aa13.93□□□□□ -0.18
TOP3A-215ENST00000583328 ZNF710Q8N1W2 664 aa13.93□□□□□ -0.18
TOP3A-215ENST00000583328 LRRC71Q8N4P6 559 aa13.93□□□□□ -0.18
TOP3A-215ENST00000583328 DTWD2Q8NBA8 298 aa13.93□□□□□ -0.18
TOP3A-215ENST00000583328 SLC22A17Q8WUG5 538 aa13.93□□□□□ -0.18
TOP3A-215ENST00000583328 ZNF577Q9BSK1 485 aa13.93□□□□□ -0.18
TOP3A-215ENST00000583328 ZBP1Q9H171 429 aa13.93□□□□□ -0.18
TOP3A-215ENST00000583328 GLT8D2Q9H1C3 349 aa13.93□□□□□ -0.18
TOP3A-215ENST00000583328 TBC1D22BQ9NU19 505 aa13.93□□□□□ -0.18
TOP3A-215ENST00000583328 DACT1Q9NYF0 836 aa13.93□□□□□ -0.18
TOP3A-215ENST00000583328 GABBR1Q9UBS5 961 aa13.93□□□□□ -0.18
TOP3A-215ENST00000583328 LOXHD1Q8IVV2 1947 aa13.93□□□□□ -0.18
TOP3A-215ENST00000583328 ZC3H11AO75152 810 aaKnown RBP eCLIP13.92□□□□□ -0.18
TOP3A-215ENST00000583328 CTSAP10619 480 aa13.92□□□□□ -0.18
TOP3A-215ENST00000583328 DARSP14868 501 aaKnown RBP13.92□□□□□ -0.18
TOP3A-215ENST00000583328 FGFR4P22455 802 aa13.92□□□□□ -0.18
TOP3A-215ENST00000583328 POLGP54098 1239 aaPredicted RBP13.92□□□□□ -0.18
TOP3A-215ENST00000583328 JAKMIP3Q5VZ66 844 aa13.92□□□□□ -0.18
TOP3A-215ENST00000583328 CCDC149Q6ZUS6 474 aa13.92□□□□□ -0.18
TOP3A-215ENST00000583328 PPFIBP1Q86W92 1011 aa13.92□□□□□ -0.18
TOP3A-215ENST00000583328 SIX5Q8N196 739 aa13.92□□□□□ -0.18
TOP3A-215ENST00000583328 FAM167AQ96KS9 214 aa13.92□□□□□ -0.18
TOP3A-215ENST00000583328 NRBP2Q9NSY0 501 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms