RNA–Protein interactions for RNA: ENST00000582885.1

CCDC57-216, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-216ENST00000582885 PPP2R5AQ15172 486 aa13.28□□□□□ -0.28
CCDC57-216ENST00000582885 MTFR1Q15390 333 aa13.28□□□□□ -0.28
CCDC57-216ENST00000582885 MARCH8Q5T0T0 291 aa13.28□□□□□ -0.28
CCDC57-216ENST00000582885 FAM102BQ5T8I3 360 aa13.28□□□□□ -0.28
CCDC57-216ENST00000582885 ISM2Q6H9L7 571 aa13.28□□□□□ -0.28
CCDC57-216ENST00000582885 CXCL17Q6UXB2 119 aa13.28□□□□□ -0.28
CCDC57-216ENST00000582885 SFR1Q86XK3 245 aa13.28□□□□□ -0.28
CCDC57-216ENST00000582885 MYCT1Q8N699 235 aa13.28□□□□□ -0.28
CCDC57-216ENST00000582885 LINC01465Q8N7H1 131 aa13.28□□□□□ -0.28
CCDC57-216ENST00000582885 SPIRE2Q8WWL2 714 aa13.28□□□□□ -0.28
CCDC57-216ENST00000582885 BPIFA3Q9BQP9 254 aa13.28□□□□□ -0.28
CCDC57-216ENST00000582885 SEZ6LQ9BYH1 1024 aa13.28□□□□□ -0.28
CCDC57-216ENST00000582885 RNF208Q9H0X6 261 aa13.28□□□□□ -0.28
CCDC57-216ENST00000582885 ST6GALNAC4Q9H4F1 302 aa13.28□□□□□ -0.28
CCDC57-216ENST00000582885 OGDHLQ9ULD0 1010 aa13.28□□□□□ -0.28
CCDC57-216ENST00000582885 PPP1R3GB7ZBB8 358 aa13.27□□□□□ -0.29
CCDC57-216ENST00000582885 DNM1LO00429 736 aa13.27□□□□□ -0.29
CCDC57-216ENST00000582885 ASAP2O43150 1006 aa13.27□□□□□ -0.29
CCDC57-216ENST00000582885 KIF20AO95235 890 aa13.27□□□□□ -0.29
CCDC57-216ENST00000582885 ERCC5P28715 1186 aaPredicted RBP13.27□□□□□ -0.29
CCDC57-216ENST00000582885 ABCD1P33897 745 aa13.27□□□□□ -0.29
CCDC57-216ENST00000582885 DNM2P50570 870 aa13.27□□□□□ -0.29
CCDC57-216ENST00000582885 STIM1Q13586 685 aa13.27□□□□□ -0.29
CCDC57-216ENST00000582885 MXD4Q14582 209 aaPredicted RBP13.27□□□□□ -0.29
CCDC57-216ENST00000582885 ANO6Q4KMQ2 910 aa13.27□□□□□ -0.29
CCDC57-216ENST00000582885 ODR4Q5SWX8 454 aa13.27□□□□□ -0.29
CCDC57-216ENST00000582885 EFCAB12Q6NXP0 572 aa13.27□□□□□ -0.29
CCDC57-216ENST00000582885 NFRKBQ6P4R8 1299 aa13.27□□□□□ -0.29
CCDC57-216ENST00000582885 FOXR2Q6PJQ5 311 aa13.27□□□□□ -0.29
CCDC57-216ENST00000582885 MTHFD1LQ6UB35 978 aa13.27□□□□□ -0.29
CCDC57-216ENST00000582885 STXBP4Q6ZWJ1 553 aa13.27□□□□□ -0.29
CCDC57-216ENST00000582885 EPM2AIP1Q7L775 607 aaPredicted RBP13.27□□□□□ -0.29
CCDC57-216ENST00000582885 FAM178BQ8IXR5 827 aa13.27□□□□□ -0.29
CCDC57-216ENST00000582885 ADSSL1Q8N142 457 aa13.27□□□□□ -0.29
CCDC57-216ENST00000582885 GUF1Q8N442 669 aaKnown RBP13.27□□□□□ -0.29
CCDC57-216ENST00000582885 C7orf31Q8N865 590 aa13.27□□□□□ -0.29
CCDC57-216ENST00000582885 KIAA0895Q8NCT3 520 aa13.27□□□□□ -0.29
CCDC57-216ENST00000582885 LMBR1Q8WVP7 490 aa13.27□□□□□ -0.29
CCDC57-216ENST00000582885 TRAPPC12Q8WVT3 735 aa13.27□□□□□ -0.29
CCDC57-216ENST00000582885 DHTKD1Q96HY7 919 aaPredicted RBP13.27□□□□□ -0.29
CCDC57-216ENST00000582885 IFT74Q96LB3 600 aa13.27□□□□□ -0.29
CCDC57-216ENST00000582885 FIZ1Q96SL8 496 aa13.27□□□□□ -0.29
CCDC57-216ENST00000582885 CRISPLD2Q9H0B8 497 aa13.27□□□□□ -0.29
CCDC57-216ENST00000582885 POLR3FQ9H1D9 316 aaPredicted RBP13.27□□□□□ -0.29
CCDC57-216ENST00000582885 ZHX3Q9H4I2 956 aa13.27□□□□□ -0.29
CCDC57-216ENST00000582885 SLC39A2Q9NP94 309 aa13.27□□□□□ -0.29
CCDC57-216ENST00000582885 PHF24Q9UPV7 400 aa13.27□□□□□ -0.29
CCDC57-216ENST00000582885 GDAQ9Y2T3 454 aa13.27□□□□□ -0.29
CCDC57-216ENST00000582885 CENPFP49454 3210 aa13.27□□□□□ -0.29
CCDC57-216ENST00000582885 SFI1A8K8P3 1242 aa13.26□□□□□ -0.29
CCDC57-216ENST00000582885 KBTBD13C9JR72 458 aa13.26□□□□□ -0.29
CCDC57-216ENST00000582885 H0YCG3 227 aa13.26□□□□□ -0.29
CCDC57-216ENST00000582885 EIF3DO15371 548 aaKnown RBP eCLIP13.26□□□□□ -0.29
CCDC57-216ENST00000582885 UBE4BO95155 1302 aa13.26□□□□□ -0.29
CCDC57-216ENST00000582885 RPLP2P05387 115 aaKnown RBP13.26□□□□□ -0.29
CCDC57-216ENST00000582885 GJB1P08034 283 aa13.26□□□□□ -0.29
CCDC57-216ENST00000582885 TMOD1P28289 359 aa13.26□□□□□ -0.29
CCDC57-216ENST00000582885 PRCPP42785 496 aa13.26□□□□□ -0.29
CCDC57-216ENST00000582885 NAMPTP43490 491 aa13.26□□□□□ -0.29
CCDC57-216ENST00000582885 SMTNP53814 917 aa13.26□□□□□ -0.29
CCDC57-216ENST00000582885 NCKAP1LP55160 1127 aa13.26□□□□□ -0.29
CCDC57-216ENST00000582885 CDC42EP1Q00587 391 aa13.26□□□□□ -0.29
CCDC57-216ENST00000582885 POU5F1BQ06416 359 aa13.26□□□□□ -0.29
CCDC57-216ENST00000582885 DMP1Q13316 513 aaPredicted RBP13.26□□□□□ -0.29
CCDC57-216ENST00000582885 MKRN4PQ13434 485 aaPredicted RBP13.26□□□□□ -0.29
CCDC57-216ENST00000582885 BMT2Q1RMZ1 405 aa13.26□□□□□ -0.29
CCDC57-216ENST00000582885 NBPF20Q3BBV1 942 aa13.26□□□□□ -0.29
CCDC57-216ENST00000582885 MAEAQ7L5Y9 396 aa13.26□□□□□ -0.29
CCDC57-216ENST00000582885 ZNF720Q7Z2F6 126 aa13.26□□□□□ -0.29
CCDC57-216ENST00000582885 ZNF710Q8N1W2 664 aa13.26□□□□□ -0.29
CCDC57-216ENST00000582885 ZNF507Q8TCN5 953 aa13.26□□□□□ -0.29
CCDC57-216ENST00000582885 PSPC1Q8WXF1 523 aaKnown RBP13.26□□□□□ -0.29
CCDC57-216ENST00000582885 HPS3Q969F9 1004 aa13.26□□□□□ -0.29
CCDC57-216ENST00000582885 TMEM143Q96AN5 459 aa13.26□□□□□ -0.29
CCDC57-216ENST00000582885 HVCN1Q96D96 273 aa13.26□□□□□ -0.29
CCDC57-216ENST00000582885 GLT1D1Q96MS3 346 aa13.26□□□□□ -0.29
CCDC57-216ENST00000582885 DEFB118Q96PH6 123 aa13.26□□□□□ -0.29
CCDC57-216ENST00000582885 STRA6Q9BX79 667 aa13.26□□□□□ -0.29
CCDC57-216ENST00000582885 DNAJC25Q9H1X3 360 aa13.26□□□□□ -0.29
CCDC57-216ENST00000582885 MRPL44Q9H9J2 332 aaKnown RBP13.26□□□□□ -0.29
CCDC57-216ENST00000582885 GPRC5CQ9NQ84 441 aa13.26□□□□□ -0.29
CCDC57-216ENST00000582885 SETD4Q9NVD3 440 aa13.26□□□□□ -0.29
CCDC57-216ENST00000582885 HDAC6Q9UBN7 1215 aa13.26□□□□□ -0.29
CCDC57-216ENST00000582885 GTF2IRD1Q9UHL9 959 aa13.26□□□□□ -0.29
CCDC57-216ENST00000582885 KIAA0100Q14667 2235 aaKnown RBP13.25□□□□□ -0.29
CCDC57-216ENST00000582885 SMIM35A0A1B0GVV1 85 aa13.25□□□□□ -0.29
CCDC57-216ENST00000582885 C17orf102A2RUQ5 167 aa13.25□□□□□ -0.29
CCDC57-216ENST00000582885 PSMA7O14818 248 aa13.25□□□□□ -0.29
CCDC57-216ENST00000582885 PPP1R37O75864 691 aa13.25□□□□□ -0.29
CCDC57-216ENST00000582885 SGPL1O95470 568 aa13.25□□□□□ -0.29
CCDC57-216ENST00000582885 CD44P16070 742 aaKnown RBP13.25□□□□□ -0.29
CCDC57-216ENST00000582885 GLRA2P23416 452 aa13.25□□□□□ -0.29
CCDC57-216ENST00000582885 NPTX2P47972 431 aa13.25□□□□□ -0.29
CCDC57-216ENST00000582885 ZNF165P49910 485 aa13.25□□□□□ -0.29
CCDC57-216ENST00000582885 PEX3P56589 373 aa13.25□□□□□ -0.29
CCDC57-216ENST00000582885 IGBP1P78318 339 aa13.25□□□□□ -0.29
CCDC57-216ENST00000582885 C11orf57Q6ZUT1 292 aaPredicted RBP13.25□□□□□ -0.29
CCDC57-216ENST00000582885 GAS2L3Q86XJ1 694 aa13.25□□□□□ -0.29
CCDC57-216ENST00000582885 SMYD4Q8IYR2 804 aaPredicted RBP13.25□□□□□ -0.29
CCDC57-216ENST00000582885 MYOCDQ8IZQ8 938 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms