RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 SLC16A11Q8NCK7 471 aa6.39□□□□□ -1.39
SMCHD1-205ENST00000581383 CLRN3Q8NCR9 226 aa6.39□□□□□ -1.39
SMCHD1-205ENST00000581383 MTMR8Q96EF0 704 aa6.39□□□□□ -1.39
SMCHD1-205ENST00000581383 SCYL1Q96KG9 808 aa6.39□□□□□ -1.39
SMCHD1-205ENST00000581383 ZNF341Q9BYN7 854 aa6.39□□□□□ -1.39
SMCHD1-205ENST00000581383 TRIM8Q9BZR9 551 aa6.39□□□□□ -1.39
SMCHD1-205ENST00000581383 PUS7LQ9H0K6 701 aaKnown RBP6.39□□□□□ -1.39
SMCHD1-205ENST00000581383 VPS11Q9H270 941 aa6.39□□□□□ -1.39
SMCHD1-205ENST00000581383 VTA1Q9NP79 307 aa6.39□□□□□ -1.39
SMCHD1-205ENST00000581383 ACSS2Q9NR19 701 aa6.39□□□□□ -1.39
SMCHD1-205ENST00000581383 WASF3Q9UPY6 502 aa6.39□□□□□ -1.39
SMCHD1-205ENST00000581383 PRKD3O94806 890 aa6.38□□□□□ -1.39
SMCHD1-205ENST00000581383 TACR2P21452 398 aa6.38□□□□□ -1.39
SMCHD1-205ENST00000581383 SMAD3P84022 425 aaKnown RBP6.38□□□□□ -1.39
SMCHD1-205ENST00000581383 USP10Q14694 798 aaKnown RBP6.38□□□□□ -1.39
SMCHD1-205ENST00000581383 TERF2Q15554 542 aa6.38□□□□□ -1.39
SMCHD1-205ENST00000581383 WDR72Q3MJ13 1102 aa6.38□□□□□ -1.39
SMCHD1-205ENST00000581383 CC2D1AQ6P1N0 951 aaPredicted RBP6.38□□□□□ -1.39
SMCHD1-205ENST00000581383 SSBP3Q9BWW4 388 aaPredicted RBP6.38□□□□□ -1.39
SMCHD1-205ENST00000581383 SEMA4AQ9H3S1 761 aa6.38□□□□□ -1.39
SMCHD1-205ENST00000581383 SLC39A2Q9NP94 309 aa6.38□□□□□ -1.39
SMCHD1-205ENST00000581383 HSPBP1Q9NZL4 362 aa6.38□□□□□ -1.39
SMCHD1-205ENST00000581383 RASSF10A6NK89 507 aa6.37□□□□□ -1.39
SMCHD1-205ENST00000581383 FOXP2O15409 715 aa6.37□□□□□ -1.39
SMCHD1-205ENST00000581383 ULK1O75385 1050 aa6.37□□□□□ -1.39
SMCHD1-205ENST00000581383 AMHP03971 560 aa6.37□□□□□ -1.39
SMCHD1-205ENST00000581383 S100BP04271 92 aaPredicted RBP6.37□□□□□ -1.39
SMCHD1-205ENST00000581383 CYP17A1P05093 508 aa6.37□□□□□ -1.39
SMCHD1-205ENST00000581383 MMEP08473 750 aa6.37□□□□□ -1.39
SMCHD1-205ENST00000581383 HMGA2P52926 109 aa6.37□□□□□ -1.39
SMCHD1-205ENST00000581383 RRADP55042 308 aa6.37□□□□□ -1.39
SMCHD1-205ENST00000581383 SESN3P58005 492 aa6.37□□□□□ -1.39
SMCHD1-205ENST00000581383 CATSPEREQ5SY80 951 aa6.37□□□□□ -1.39
SMCHD1-205ENST00000581383 ERCC4Q92889 916 aaPredicted RBP6.37□□□□□ -1.39
SMCHD1-205ENST00000581383 GNRHR2Q96P88 292 aa6.37□□□□□ -1.39
SMCHD1-205ENST00000581383 CARD11Q9BXL7 1154 aa6.37□□□□□ -1.39
SMCHD1-205ENST00000581383 PDGFDQ9GZP0 370 aaPredicted RBP6.37□□□□□ -1.39
SMCHD1-205ENST00000581383 C12orf65Q9H3J6 166 aaKnown RBP6.37□□□□□ -1.39
SMCHD1-205ENST00000581383 MS4A5Q9H3V2 200 aa6.37□□□□□ -1.39
SMCHD1-205ENST00000581383 KLHL42Q9P2K6 505 aa6.37□□□□□ -1.39
SMCHD1-205ENST00000581383 G3BP2Q9UN86 482 aaKnown RBP6.37□□□□□ -1.39
SMCHD1-205ENST00000581383 LCHNA4D1U4 455 aa6.36□□□□□ -1.39
SMCHD1-205ENST00000581383 ZNF839A8K0R7 811 aa6.36□□□□□ -1.39
SMCHD1-205ENST00000581383 FZD7O75084 574 aa6.36□□□□□ -1.39
SMCHD1-205ENST00000581383 KLHL18O94889 574 aa6.36□□□□□ -1.39
SMCHD1-205ENST00000581383 KNG1P01042 644 aa6.36□□□□□ -1.39
SMCHD1-205ENST00000581383 RAC3P60763 192 aa6.36□□□□□ -1.39
SMCHD1-205ENST00000581383 ODR4Q5SWX8 454 aa6.36□□□□□ -1.39
SMCHD1-205ENST00000581383 ESRP1Q6NXG1 681 aaKnown RBP6.36□□□□□ -1.39
SMCHD1-205ENST00000581383 PROSER1Q86XN7 944 aa6.36□□□□□ -1.39
SMCHD1-205ENST00000581383 REXO1L1PQ8IX06 675 aa6.36□□□□□ -1.39
SMCHD1-205ENST00000581383 AHCYL2Q96HN2 611 aaKnown RBP6.36□□□□□ -1.39
SMCHD1-205ENST00000581383 SMAD5Q99717 465 aaKnown RBP6.36□□□□□ -1.39
SMCHD1-205ENST00000581383 KRTAP3-1Q9BYR8 98 aa6.36□□□□□ -1.39
SMCHD1-205ENST00000581383 ASPSCR1Q9BZE9 553 aa6.36□□□□□ -1.39
SMCHD1-205ENST00000581383 ZMAT4Q9H898 229 aa6.36□□□□□ -1.39
SMCHD1-205ENST00000581383 SEC61A2Q9H9S3 476 aa6.36□□□□□ -1.39
SMCHD1-205ENST00000581383 METTL14Q9HCE5 456 aaKnown RBP6.36□□□□□ -1.39
SMCHD1-205ENST00000581383 TRHDEQ9UKU6 1024 aa6.36□□□□□ -1.39
SMCHD1-205ENST00000581383 NOC2LQ9Y3T9 749 aaKnown RBP6.36□□□□□ -1.39
SMCHD1-205ENST00000581383 SDHAP31040 664 aa6.35□□□□□ -1.39
SMCHD1-205ENST00000581383 LSP1P33241 339 aa6.35□□□□□ -1.39
SMCHD1-205ENST00000581383 PHC1P78364 1004 aa6.35□□□□□ -1.39
SMCHD1-205ENST00000581383 FAPQ12884 760 aa6.35□□□□□ -1.39
SMCHD1-205ENST00000581383 PRKD1Q15139 912 aaPredicted RBP6.35□□□□□ -1.39
SMCHD1-205ENST00000581383 ZMAT1Q5H9K5 638 aa6.35□□□□□ -1.39
SMCHD1-205ENST00000581383 SYDE2Q5VT97 1194 aa6.35□□□□□ -1.39
SMCHD1-205ENST00000581383 TAX1BP1Q86VP1 789 aa6.35□□□□□ -1.39
SMCHD1-205ENST00000581383 RASSF3Q86WH2 238 aa6.35□□□□□ -1.39
SMCHD1-205ENST00000581383 ZFPM1Q8IX07 1006 aa6.35□□□□□ -1.39
SMCHD1-205ENST00000581383 ZNF610Q8N9Z0 462 aa6.35□□□□□ -1.39
SMCHD1-205ENST00000581383 ASB15Q8WXK1 588 aa6.35□□□□□ -1.39
SMCHD1-205ENST00000581383 RTF1Q92541 710 aaKnown RBP6.35□□□□□ -1.39
SMCHD1-205ENST00000581383 AJUBAQ96IF1 538 aa6.35□□□□□ -1.39
SMCHD1-205ENST00000581383 GBP4Q96PP9 640 aa6.35□□□□□ -1.39
SMCHD1-205ENST00000581383 ADOQ96SZ5 270 aa6.35□□□□□ -1.39
SMCHD1-205ENST00000581383 CSRNP2Q9H175 543 aa6.35□□□□□ -1.39
SMCHD1-205ENST00000581383 TOPORSQ9NS56 1045 aaPredicted RBP6.35□□□□□ -1.39
SMCHD1-205ENST00000581383 KCND1Q9NSA2 647 aa6.35□□□□□ -1.39
SMCHD1-205ENST00000581383 ALDH1L1O75891 902 aa6.34□□□□□ -1.39
SMCHD1-205ENST00000581383 COL6A1P12109 1028 aa6.34□□□□□ -1.39
SMCHD1-205ENST00000581383 CSF2RBP32927 897 aa6.34□□□□□ -1.39
SMCHD1-205ENST00000581383 HERVK_113P62684 666 aa6.34□□□□□ -1.39
SMCHD1-205ENST00000581383 DBPQ10586 325 aaPredicted RBP6.34□□□□□ -1.39
SMCHD1-205ENST00000581383 LRRC32Q14392 662 aa6.34□□□□□ -1.39
SMCHD1-205ENST00000581383 NRN1LQ496H8 165 aa6.34□□□□□ -1.39
SMCHD1-205ENST00000581383 SPDYAQ5MJ70 313 aa6.34□□□□□ -1.39
SMCHD1-205ENST00000581383 CMIPQ8IY22 773 aa6.34□□□□□ -1.39
SMCHD1-205ENST00000581383 HIPK4Q8NE63 616 aa6.34□□□□□ -1.39
SMCHD1-205ENST00000581383 ZNF496Q96IT1 587 aaPredicted RBP6.34□□□□□ -1.39
SMCHD1-205ENST00000581383 C16orf92Q96LL3 132 aa6.34□□□□□ -1.39
SMCHD1-205ENST00000581383 C14orf119Q9NWQ9 140 aa6.34□□□□□ -1.39
SMCHD1-205ENST00000581383 ZFR2Q9UPR6 939 aaKnown RBP6.34□□□□□ -1.39
SMCHD1-205ENST00000581383 HS3ST3A1Q9Y663 406 aa6.34□□□□□ -1.39
SMCHD1-205ENST00000581383 SLC4A7Q9Y6M7 1214 aa6.34□□□□□ -1.39
SMCHD1-205ENST00000581383 PATE3B3GLJ2 98 aa6.33□□□□□ -1.4
SMCHD1-205ENST00000581383 GABRDO14764 452 aa6.33□□□□□ -1.4
SMCHD1-205ENST00000581383 SUV39H1O43463 412 aa6.33□□□□□ -1.4
SMCHD1-205ENST00000581383 CUTAO60888 179 aa6.33□□□□□ -1.4
SMCHD1-205ENST00000581383 CNOT4O95628 575 aaKnown RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms